FFCP PHASE1:Hg19::chr7:54610265..54610288,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J5 | |UniProt=F8W8J5 | ||
|association_with_transcript=-9bp_to_ENST00000402613_5end | |association_with_transcript=-9bp_to_ENST00000402613_5end | ||
|cluster_id=chr7:54610265..54610288,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_VSTM2A_5end | |description=CAGE_peak_3_at_VSTM2A_5end | ||
|id=chr7:54610265..54610288,+ | |id=chr7:54610265..54610288,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.93e-20;82!UBERON:0006241;3.72e-10;3!UBERON:0003057;3.72e-10;3!UBERON:0010122;1.17e-07;2 | |||
|ontology_enrichment_disease=DOID:169!3.34e-08!6 | |ontology_enrichment_disease=DOID:169!3.34e-08!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.16e-78!57;UBERON:0005068!5.16e-78!57;UBERON:0006241!5.16e-78!57;UBERON:0007135!5.16e-78!57;UBERON:0000073!1.18e-74!94;UBERON:0001016!1.18e-74!94;UBERON:0001017!1.80e-74!82;UBERON:0005743!6.12e-73!86;UBERON:0002616!4.17e-65!59;UBERON:0002780!2.61e-63!41;UBERON:0001890!2.61e-63!41;UBERON:0006240!2.61e-63!41;UBERON:0003080!1.50e-61!42;UBERON:0000955!1.98e-61!69;UBERON:0006238!1.98e-61!69;UBERON:0001893!4.38e-58!34;UBERON:0002020!4.46e-58!34;UBERON:0003528!4.46e-58!34;UBERON:0002791!6.21e-56!33;UBERON:0001869!7.47e-55!32;UBERON:0007023!1.87e-54!115;UBERON:0003075!1.38e-53!86;UBERON:0007284!1.38e-53!86;UBERON:0002346!8.68e-53!90;UBERON:0002619!1.15e-47!22;UBERON:0001950!6.82e-44!20;UBERON:0003056!2.74e-41!61;UBERON:0000956!2.86e-41!25;UBERON:0000203!2.86e-41!25;UBERON:0000924!1.88e-35!173;UBERON:0006601!1.88e-35!173;UBERON:0004121!2.84e-35!169;UBERON:0000033!2.32e-31!123;UBERON:0000153!1.49e-30!129;UBERON:0007811!1.49e-30!129;UBERON:0002420!2.91e-18!9;UBERON:0007245!2.91e-18!9;UBERON:0010009!2.91e-18!9;UBERON:0010011!2.91e-18!9;UBERON:0000454!2.91e-18!9;UBERON:0000025!5.17e-18!194;UBERON:0002308!5.48e-18!9;UBERON:0000125!5.48e-18!9;UBERON:0001871!3.76e-17!7;UBERON:0003076!6.50e-17!15;UBERON:0003057!6.50e-17!15;UBERON:0009663!2.45e-14!7;UBERON:0000200!5.42e-14!6;UBERON:0004111!4.83e-13!241;UBERON:0004733!6.01e-12!12;UBERON:0002028!6.01e-12!12;UBERON:0007277!6.01e-12!12;UBERON:0002021!6.40e-12!5;UBERON:0001872!7.61e-12!5;UBERON:0002298!7.95e-12!8;UBERON:0000349!3.18e-11!5;UBERON:0004732!6.95e-11!13;UBERON:0000064!1.35e-10!219;UBERON:0000477!2.32e-09!286;UBERON:0000369!2.59e-09!4;UBERON:0002435!2.59e-09!4;UBERON:0000204!2.59e-09!4;UBERON:0010082!2.59e-09!4;UBERON:0000483!1.26e-08!309;UBERON:0000119!2.09e-08!312;UBERON:0000922!3.01e-08!612;UBERON:0002771!1.10e-07!3;UBERON:0002050!1.37e-07!605;UBERON:0005423!1.37e-07!605;UBERON:0000475!1.57e-07!365;UBERON:0005383!2.19e-07!3;UBERON:0005382!2.19e-07!3;UBERON:0002680!2.35e-07!9;UBERON:0001895!2.35e-07!9;UBERON:0010092!2.35e-07!9;UBERON:0001894!3.52e-07!7;UBERON:0006222!3.52e-07!7;UBERON:0000923!3.67e-07!604;UBERON:0005291!3.67e-07!604;UBERON:0006598!3.67e-07!604;UBERON:0002532!3.67e-07!604;UBERON:0000988!4.95e-07!3;UBERON:0002240!5.27e-07!3;UBERON:0000468!5.49e-07!659;UBERON:0001896!8.25e-07!3;UBERON:0006331!8.25e-07!3;UBERON:0005290!8.25e-07!3;UBERON:0010096!8.25e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!5.16e-78!57;UBERON:0005068!5.16e-78!57;UBERON:0006241!5.16e-78!57;UBERON:0007135!5.16e-78!57;UBERON:0000073!1.18e-74!94;UBERON:0001016!1.18e-74!94;UBERON:0001017!1.80e-74!82;UBERON:0005743!6.12e-73!86;UBERON:0002616!4.17e-65!59;UBERON:0002780!2.61e-63!41;UBERON:0001890!2.61e-63!41;UBERON:0006240!2.61e-63!41;UBERON:0003080!1.50e-61!42;UBERON:0000955!1.98e-61!69;UBERON:0006238!1.98e-61!69;UBERON:0001893!4.38e-58!34;UBERON:0002020!4.46e-58!34;UBERON:0003528!4.46e-58!34;UBERON:0002791!6.21e-56!33;UBERON:0001869!7.47e-55!32;UBERON:0007023!1.87e-54!115;UBERON:0003075!1.38e-53!86;UBERON:0007284!1.38e-53!86;UBERON:0002346!8.68e-53!90;UBERON:0002619!1.15e-47!22;UBERON:0001950!6.82e-44!20;UBERON:0003056!2.74e-41!61;UBERON:0000956!2.86e-41!25;UBERON:0000203!2.86e-41!25;UBERON:0000924!1.88e-35!173;UBERON:0006601!1.88e-35!173;UBERON:0004121!2.84e-35!169;UBERON:0000033!2.32e-31!123;UBERON:0000153!1.49e-30!129;UBERON:0007811!1.49e-30!129;UBERON:0002420!2.91e-18!9;UBERON:0007245!2.91e-18!9;UBERON:0010009!2.91e-18!9;UBERON:0010011!2.91e-18!9;UBERON:0000454!2.91e-18!9;UBERON:0000025!5.17e-18!194;UBERON:0002308!5.48e-18!9;UBERON:0000125!5.48e-18!9;UBERON:0001871!3.76e-17!7;UBERON:0003076!6.50e-17!15;UBERON:0003057!6.50e-17!15;UBERON:0009663!2.45e-14!7;UBERON:0000200!5.42e-14!6;UBERON:0004111!4.83e-13!241;UBERON:0004733!6.01e-12!12;UBERON:0002028!6.01e-12!12;UBERON:0007277!6.01e-12!12;UBERON:0002021!6.40e-12!5;UBERON:0001872!7.61e-12!5;UBERON:0002298!7.95e-12!8;UBERON:0000349!3.18e-11!5;UBERON:0004732!6.95e-11!13;UBERON:0000064!1.35e-10!219;UBERON:0000477!2.32e-09!286;UBERON:0000369!2.59e-09!4;UBERON:0002435!2.59e-09!4;UBERON:0000204!2.59e-09!4;UBERON:0010082!2.59e-09!4;UBERON:0000483!1.26e-08!309;UBERON:0000119!2.09e-08!312;UBERON:0000922!3.01e-08!612;UBERON:0002771!1.10e-07!3;UBERON:0002050!1.37e-07!605;UBERON:0005423!1.37e-07!605;UBERON:0000475!1.57e-07!365;UBERON:0005383!2.19e-07!3;UBERON:0005382!2.19e-07!3;UBERON:0002680!2.35e-07!9;UBERON:0001895!2.35e-07!9;UBERON:0010092!2.35e-07!9;UBERON:0001894!3.52e-07!7;UBERON:0006222!3.52e-07!7;UBERON:0000923!3.67e-07!604;UBERON:0005291!3.67e-07!604;UBERON:0006598!3.67e-07!604;UBERON:0002532!3.67e-07!604;UBERON:0000988!4.95e-07!3;UBERON:0002240!5.27e-07!3;UBERON:0000468!5.49e-07!659;UBERON:0001896!8.25e-07!3;UBERON:0006331!8.25e-07!3;UBERON:0005290!8.25e-07!3;UBERON:0010096!8.25e-07!3 | ||
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|short_description=p3@VSTM2A | |short_description=p3@VSTM2A | ||
}} | }} |
Latest revision as of 00:04, 19 September 2015
Short description: | p3@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000402613_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | F8W8J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data