FFCP PHASE1:Hg19::chr19:47975143..47975184,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:47975143..47975184,- to FFCP PHASE1:Hg19::chr19:47975143..47975184,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6543 | |EntrezGene=6543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11069 | |HGNC=11069 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6L7 | |UniProt=F5H6L7 | ||
|association_with_transcript=-14bp_to_ENST00000542837_5end | |||
|cluster_id=chr19:47975143..47975184,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SLC8A2_5end | |||
|id=chr19:47975143..47975184,- | |||
|ontology_enrichment_celltype=CL:0000047!4.48e-09!8;CL:0000540!1.44e-07!6;CL:0000031!1.44e-07!6;CL:0000404!1.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.06e-10;6!CL:0000404;2.06e-10;6!CL:0002322;2.90e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.11e-10,6;CL:0000031,2.11e-10,6;CL:0000404,2.11e-10,6;CL:0000047,3.34e-10,8;CL:0002322,3.23e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.50e-17;82!CL:0000031;2.06e-10;6!UBERON:0006215;1.59e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.59e-62!82;UBERON:0005743!1.11e-59!86;UBERON:0000073!3.84e-58!94;UBERON:0001016!3.84e-58!94;UBERON:0007023!1.37e-55!115;UBERON:0001049!1.23e-54!57;UBERON:0005068!1.23e-54!57;UBERON:0006241!1.23e-54!57;UBERON:0007135!1.23e-54!57;UBERON:0000955!2.74e-48!69;UBERON:0006238!2.74e-48!69;UBERON:0002616!2.68e-47!59;UBERON:0002346!2.27e-44!90;UBERON:0002780!2.31e-42!41;UBERON:0001890!2.31e-42!41;UBERON:0006240!2.31e-42!41;UBERON:0003075!2.89e-41!86;UBERON:0007284!2.89e-41!86;UBERON:0003080!5.27e-41!42;UBERON:0001893!1.89e-34!34;UBERON:0002020!3.10e-34!34;UBERON:0003528!3.10e-34!34;UBERON:0002791!3.34e-33!33;UBERON:0001869!1.43e-32!32;UBERON:0002619!2.83e-29!22;UBERON:0000924!5.73e-29!173;UBERON:0006601!5.73e-29!173;UBERON:0001950!8.06e-27!20;UBERON:0003056!9.26e-27!61;UBERON:0004121!1.46e-26!169;UBERON:0000956!8.09e-25!25;UBERON:0000203!8.09e-25!25;UBERON:0000153!9.07e-22!129;UBERON:0007811!9.07e-22!129;UBERON:0000033!1.79e-20!123;UBERON:0003076!2.99e-14!15;UBERON:0003057!2.99e-14!15;UBERON:0004732!2.93e-12!13;UBERON:0004733!2.78e-11!12;UBERON:0002028!2.78e-11!12;UBERON:0007277!2.78e-11!12;UBERON:0002420!3.82e-11!9;UBERON:0007245!3.82e-11!9;UBERON:0010009!3.82e-11!9;UBERON:0010011!3.82e-11!9;UBERON:0000454!3.82e-11!9;UBERON:0000025!3.88e-11!194;UBERON:0001871!5.52e-11!7;UBERON:0002308!8.37e-11!9;UBERON:0000125!8.37e-11!9;UBERON:0000922!2.06e-10!612;UBERON:0001894!3.11e-09!7;UBERON:0006222!3.11e-09!7;UBERON:0000200!7.03e-09!6;UBERON:0009663!9.21e-09!7;UBERON:0002680!2.07e-08!9;UBERON:0001895!2.07e-08!9;UBERON:0010092!2.07e-08!9;UBERON:0000468!2.98e-08!659;UBERON:0003135!2.99e-08!11;UBERON:0004111!4.35e-08!241;UBERON:0002050!8.23e-08!605;UBERON:0005423!8.23e-08!605;UBERON:0002021!1.10e-07!5;UBERON:0000349!1.15e-07!5;UBERON:0001872!1.19e-07!5;UBERON:0000923!1.74e-07!604;UBERON:0005291!1.74e-07!604;UBERON:0006598!1.74e-07!604;UBERON:0002532!1.74e-07!604;UBERON:0002298!3.82e-07!8;UBERON:0000062!5.32e-07!511;UBERON:0000064!7.02e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.80e-45;41!UBERON:0001890;9.80e-45;41!UBERON:0001869;5.13e-43;32!UBERON:0001893;6.36e-43;34!UBERON:0003528;9.68e-43;34!UBERON:0002020;9.68e-43;34!UBERON:0002791;1.78e-42;32!UBERON:0002619;2.18e-42;22!UBERON:0000073;1.10e-40;53!UBERON:0002616;1.10e-40;53!UBERON:0001950;9.25e-39;20!UBERON:0000956;1.41e-36;25!UBERON:0000203;1.41e-36;25!UBERON:0000955;8.29e-30;68!UBERON:0001017;5.01e-29;75!UBERON:0001016;3.32e-26;83!UBERON:0007023;9.75e-19;114!UBERON:0002420;1.24e-15;9!UBERON:0007245;1.24e-15;9!UBERON:0010009;1.24e-15;9!UBERON:0010011;1.24e-15;9!UBERON:0000454;1.24e-15;9!UBERON:0000125;3.93e-15;9!UBERON:0002308;3.93e-15;9!UBERON:0001871;1.22e-13;6!UBERON:0004732;4.31e-13;13!UBERON:0001894;7.99e-13;7!UBERON:0000200;2.51e-12;6!UBERON:0009663;3.93e-12;7!UBERON:0004733;1.07e-11;12!UBERON:0002028;1.07e-11;12!UBERON:0011216;5.35e-11;132!UBERON:0002021;1.42e-10;5!UBERON:0000349;1.51e-10;5!UBERON:0001872;1.58e-10;5!UBERON:0002298;1.59e-10;6!UBERON:0003296;1.60e-08;4!UBERON:0010133;1.60e-08;4!UBERON:0000369;2.87e-08;4!UBERON:0002435;2.87e-08;4!UBERON:0000204;2.87e-08;4!UBERON:0002784;3.83e-08;4!UBERON:0002680;1.04e-07;9!UBERON:0001895;1.04e-07;9!UBERON:0001870;6.04e-07;3!UBERON:0010314;8.00e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-83,81;UBERON:0001049,1.05e-77,56;UBERON:0005068,1.05e-77,56;UBERON:0006241,1.05e-77,56;UBERON:0007135,1.05e-77,56;UBERON:0001016,5.63e-76,89;UBERON:0000073,6.20e-73,53;UBERON:0002616,6.20e-73,53;UBERON:0000955,4.09e-66,68;UBERON:0006238,4.09e-66,68;UBERON:0007023,4.32e-65,114;UBERON:0002780,1.42e-62,41;UBERON:0001890,1.42e-62,41;UBERON:0003080,1.42e-62,41;UBERON:0006240,1.42e-62,41;UBERON:0002346,1.09e-57,86;UBERON:0003075,1.18e-56,82;UBERON:0007284,1.18e-56,82;UBERON:0001893,7.41e-51,34;UBERON:0003528,1.55e-50,34;UBERON:0002020,1.55e-50,34;UBERON:0001869,4.44e-48,32;UBERON:0002791,2.08e-47,32;UBERON:0003056,8.42e-45,61;UBERON:0010371,9.39e-45,104;UBERON:0002619,2.07e-42,22;UBERON:0001950,8.76e-39,20;UBERON:0004121,2.51e-38,171;UBERON:0000924,2.51e-38,171;UBERON:0006601,2.51e-38,171;UBERON:0000956,1.34e-36,25;UBERON:0000203,1.34e-36,25;UBERON:0011216,2.26e-35,223;UBERON:0010314,1.30e-31,132;UBERON:0000025,2.25e-16,192;UBERON:0003076,7.04e-16,15;UBERON:0003057,7.04e-16,15;UBERON:0002420,1.17e-15,9;UBERON:0007245,1.17e-15,9;UBERON:0010009,1.17e-15,9;UBERON:0010011,1.17e-15,9;UBERON:0000454,1.17e-15,9;UBERON:0000125,3.73e-15,9;UBERON:0002308,3.73e-15,9;UBERON:0004111,7.44e-14,240;UBERON:0001871,1.12e-13,6;UBERON:0004732,4.68e-13,13;UBERON:0001894,7.57e-13,7;UBERON:0006222,7.57e-13,7;UBERON:0000200,2.51e-12,6;UBERON:0009663,3.73e-12,7;UBERON:0004733,1.12e-11,12;UBERON:0002028,1.12e-11,12;UBERON:0007277,1.12e-11,12;UBERON:0002021,1.43e-10,5;UBERON:0000349,1.51e-10,5;UBERON:0001872,1.60e-10,5;UBERON:0002298,1.68e-10,6;UBERON:0000922,8.81e-10,592;UBERON:0003296,1.66e-08,4;UBERON:0010133,1.66e-08,4;UBERON:0002050,2.21e-08,564;UBERON:0000369,2.82e-08,4;UBERON:0002435,2.82e-08,4;UBERON:0000204,2.82e-08,4;UBERON:0010082,2.82e-08,4;UBERON:0002784,3.59e-08,4;UBERON:0000923,3.70e-08,560;UBERON:0010316,3.70e-08,560;UBERON:0005291,3.70e-08,560;UBERON:0006598,3.70e-08,560;UBERON:0010317,3.70e-08,560;UBERON:0002532,3.70e-08,560;UBERON:0000483,4.53e-08,306;UBERON:0000119,7.57e-08,309;UBERON:0002680,1.05e-07,9;UBERON:0001895,1.05e-07,9;UBERON:0010092,1.05e-07,9;UBERON:0005423,1.90e-07,581;UBERON:0001870,6.16e-07,3 | |||
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| ||
|short_description=p1@SLC8A2 | |||
}} | }} |
Latest revision as of 00:01, 19 September 2015
Short description: | p1@SLC8A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC8A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -14bp_to_ENST00000542837_5end |
EntrezGene: | SLC8A2 |
HGNC: | 11069 |
UniProt: | F5H6L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.11e-10 | 6 |
neuroblast | 2.11e-10 | 6 |
electrically signaling cell | 2.11e-10 | 6 |
neuronal stem cell | 3.34e-10 | 8 |
embryonic stem cell | 3.23e-08 | 5 |