FFCP PHASE1:Hg19::chr3:52324051..52324065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132158 | |EntrezGene=132158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24247 | |HGNC=24247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000473583_5end | |association_with_transcript=-24bp_to_ENST00000473583_5end | ||
|cluster_id=chr3:52324051..52324065,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_GLYCTK_5end | |description=CAGE_peak_3_at_GLYCTK_5end | ||
|id=chr3:52324051..52324065,+ | |id=chr3:52324051..52324065,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.85e-22!12;CL:0000417!5.85e-22!12;CL:0000668!5.85e-22!12;CL:0000414!5.85e-22!12;CL:0000412!5.85e-22!12;CL:0000182!5.85e-22!12;CL:0000223!4.67e-11!59 | |ontology_enrichment_celltype=CL:0000181!5.85e-22!12;CL:0000417!5.85e-22!12;CL:0000668!5.85e-22!12;CL:0000414!5.85e-22!12;CL:0000412!5.85e-22!12;CL:0000182!5.85e-22!12;CL:0000223!4.67e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.89e-31;12!CL:0002521;4.54e-11;3!CL:0002563;1.33e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.91e-31,12;CL:0000223,3.21e-14,58;CL:0002521,5.71e-11,3;CL:0002563,1.21e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.34e-24;11!UBERON:0009497;9.36e-21;13!UBERON:0003104;7.32e-15;31!CL:0000223;1.60e-09;58!UBERON:0001041;9.87e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;5.60e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.10e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0009854!2.23e-24!23;UBERON:0009497!4.62e-22!25;UBERON:0000015!4.62e-22!25;UBERON:0002423!4.62e-22!25;UBERON:0006235!4.62e-22!25;UBERON:0004161!4.62e-22!25;UBERON:0008835!1.63e-21!22;UBERON:0003894!1.63e-21!22;UBERON:0009856!2.95e-21!26;UBERON:0002107!4.14e-21!19;UBERON:0006925!4.14e-21!19;UBERON:0008836!4.14e-21!19;UBERON:0007499!1.20e-18!25;UBERON:0005057!8.08e-18!26;UBERON:0005409!8.14e-17!35;UBERON:0000160!5.06e-16!27;UBERON:0004921!9.53e-16!129;UBERON:0004185!9.53e-16!129;UBERON:0005172!1.06e-15!55;UBERON:0005173!1.06e-15!55;UBERON:0003929!2.18e-14!54;UBERON:0002417!8.56e-14!61;UBERON:0000916!8.56e-14!61;UBERON:0001007!3.06e-13!155;UBERON:0001555!3.06e-13!155;UBERON:0007026!3.06e-13!155;UBERON:0002365!3.78e-12!31;UBERON:0002330!3.78e-12!31;UBERON:0004119!1.25e-11!169;UBERON:0000925!1.25e-11!169;UBERON:0006595!1.25e-11!169;UBERON:0000949!3.23e-11!45;UBERON:0002368!1.57e-10!35;UBERON:0005911!1.38e-09!82;UBERON:0005177!1.69e-09!107;UBERON:0000059!2.15e-09!11;UBERON:0000077!3.00e-09!130;UBERON:0004907!2.96e-08!5;UBERON:0001155!1.40e-07!9;UBERON:0001041!2.46e-07!98;UBERON:0002108!8.39e-07!14;UBERON:0009569!9.64e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.61e-32;19!UBERON:0006925;9.61e-32;19!UBERON:0002423;8.13e-24;25!UBERON:0005409;3.70e-20;22!UBERON:0000160;5.49e-20;17!UBERON:0002365;2.09e-18;31!UBERON:0002330;2.09e-18;31!UBERON:0002368;3.83e-16;33!UBERON:0002108;2.10e-14;4!UBERON:0001007;1.21e-12;81!UBERON:0000949;1.38e-11;43!UBERON:0002190;4.54e-11;3!UBERON:0004921;4.63e-11;33!UBERON:0001242;1.33e-08;4!UBERON:0001262;1.33e-08;4!UBERON:0004786;1.33e-08;4!UBERON:0004808;1.33e-08;4!UBERON:0001277;1.33e-08;4!UBERON:0001052;1.61e-08;4!UBERON:0002530;2.01e-07;57!UBERON:0005172;3.65e-07;52!UBERON:0005173;3.65e-07;52!UBERON:0002072;5.56e-07;5!UBERON:0004907;5.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.44e-32,19;UBERON:0006925,9.44e-32,19;UBERON:0008836,9.44e-32,19;UBERON:0008835,3.02e-27,22;UBERON:0003894,3.02e-27,22;UBERON:0009854,5.25e-26,23;UBERON:0007499,8.03e-24,25;UBERON:0009497,8.03e-24,25;UBERON:0000015,8.03e-24,25;UBERON:0002423,8.03e-24,25;UBERON:0006235,8.03e-24,25;UBERON:0004161,8.03e-24,25;UBERON:0009856,7.43e-23,26;UBERON:0000160,5.18e-20,17;UBERON:0002365,5.90e-19,31;UBERON:0002330,5.90e-19,31;UBERON:0003929,1.41e-18,54;UBERON:0005409,1.02e-17,25;UBERON:0004921,1.07e-17,118;UBERON:0002368,1.23e-16,35;UBERON:0002108,2.41e-14,4;UBERON:0001007,8.18e-14,145;UBERON:0001555,8.18e-14,145;UBERON:0007026,8.18e-14,145;UBERON:0000949,1.22e-12,45;UBERON:0004119,3.23e-12,160;UBERON:0000925,3.23e-12,160;UBERON:0006595,3.23e-12,160;UBERON:0002530,1.42e-11,59;UBERON:0005911,1.64e-11,82;UBERON:0002190,5.71e-11,3;UBERON:0005172,2.63e-10,54;UBERON:0005173,2.63e-10,54;UBERON:0002417,3.85e-09,60;UBERON:0000916,3.85e-09,60;UBERON:0011216,8.89e-09,223;UBERON:0001242,1.21e-08,4;UBERON:0001262,1.21e-08,4;UBERON:0004786,1.21e-08,4;UBERON:0004808,1.21e-08,4;UBERON:0001277,1.21e-08,4;UBERON:0001052,1.30e-08,4;UBERON:0001041,2.68e-07,87;UBERON:0004907,4.70e-07,5;UBERON:0002072,6.37e-07,5;UBERON:0000059,9.37e-07,11 | |||
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| ||
|short_description=p3@GLYCTK | |short_description=p3@GLYCTK | ||
}} | }} |
Latest revision as of 23:20, 18 September 2015
Short description: | p3@GLYCTK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLYCTK_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -24bp_to_ENST00000473583_5end |
EntrezGene: | GLYCTK |
HGNC: | 24247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.91e-31 | 12 |
endodermal cell | 3.21e-14 | 58 |
subcutaneous fat cell | 5.71e-11 | 3 |
intestinal epithelial cell | 1.21e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.10e-09 | 14 |