FFCP PHASE1:Hg19::chr2:75788038..75788089,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25816 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H8M9 | |||
|association_with_transcript=0bp_to_ENST00000393913,ENST00000410113,ENST00000485891,ENST00000490746_5end | |||
|cluster_id=chr2:75788038..75788089,- | |||
|description=CAGE_peak_1_at_FAM176A_5end | |||
|id=chr2:75788038..75788089,- | |||
|ontology_enrichment_celltype=CL:0000220!4.63e-27!246;CL:0002321!1.33e-26!248;CL:0000055!1.18e-25!180;CL:0000222!2.81e-18!119;CL:0000066!2.90e-17!254;CL:0000057!1.59e-15!75;CL:0000548!9.52e-12!679;CL:0000004!9.52e-12!679;CL:0000255!9.52e-12!679;CL:0000144!1.09e-11!625;CL:0000213!3.81e-11!57;CL:0000215!3.81e-11!57;CL:0002371!4.01e-11!591;CL:0000012!5.53e-11!682;CL:0000115!5.15e-10!35;CL:0002620!1.27e-09!23;CL:1000497!2.84e-09!18;CL:0002518!2.84e-09!18;CL:0002078!5.22e-09!44;CL:0002139!6.41e-09!24;CL:1000449!7.19e-09!16;CL:0000183!4.50e-08!59;CL:0000076!2.35e-07!62;CL:0000680!4.18e-07!57;CL:0000056!4.18e-07!57;CL:0000355!4.18e-07!57;CL:0002681!4.45e-07!13;CL:0002584!4.45e-07!13;CL:0000187!7.33e-07!54;CL:0000071!7.74e-07!18;CL:0002546!7.74e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.09e-10;17!CL:0002518;6.09e-10;17!CL:0002620;6.12e-10;23!CL:0000115;1.06e-09;36!CL:1000449;1.59e-09;15!CL:0002139;3.66e-09;24!CL:0002681;1.17e-07;12!CL:0002584;1.17e-07;12!CL:0000213;1.53e-07;58!CL:0000215;1.53e-07;58!CL:0000057;3.20e-07;73!CL:0000071;5.37e-07;18!CL:0002078;7.76e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.61e-27,250;CL:0000222,1.09e-19,121;CL:0000066,1.82e-17,253;CL:0000057,1.69e-16,76;CL:0000213,2.28e-12,58;CL:0000215,2.28e-12,58;CL:0000115,3.96e-11,36;CL:0002078,3.78e-10,45;CL:0002620,6.28e-10,23;CL:1000497,6.34e-10,17;CL:0002518,6.34e-10,17;CL:1000449,1.55e-09,15;CL:0002139,3.36e-09,24;CL:0002681,1.18e-07,12;CL:0002584,1.18e-07,12;CL:0000076,1.41e-07,63;CL:0000680,2.86e-07,58;CL:0000056,2.86e-07,58;CL:0000355,2.86e-07,58;CL:0000071,4.85e-07,18;CL:0002546,4.85e-07,18;CL:0000187,5.12e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;5.37e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.13e-18!118;UBERON:0005256!1.43e-16!143;UBERON:0000475!6.03e-15!365;UBERON:0002049!9.36e-15!79;UBERON:0007798!9.36e-15!79;UBERON:0000119!2.47e-14!312;UBERON:0000483!7.99e-14!309;UBERON:0000490!2.97e-13!138;UBERON:0002100!3.63e-13!216;UBERON:0000055!2.87e-12!69;UBERON:0004872!9.63e-12!84;UBERON:0003104!1.93e-11!238;UBERON:0009142!1.93e-11!238;UBERON:0000481!2.90e-11!347;UBERON:0000914!8.56e-11!83;UBERON:0002329!8.56e-11!83;UBERON:0003077!8.56e-11!83;UBERON:0003059!8.56e-11!83;UBERON:0007282!8.56e-11!83;UBERON:0009618!8.56e-11!83;UBERON:0007285!8.56e-11!83;UBERON:0000477!1.07e-10!286;UBERON:0001981!2.49e-10!60;UBERON:0007500!2.49e-10!60;UBERON:0004537!2.49e-10!60;UBERON:0006965!2.49e-10!60;UBERON:0003102!2.60e-10!95;UBERON:0000467!3.51e-10!625;UBERON:0004535!5.95e-10!110;UBERON:0000480!5.96e-10!626;UBERON:0000486!1.16e-09!82;UBERON:0002199!1.22e-09!45;UBERON:0002416!1.22e-09!45;UBERON:0000058!1.35e-09!26;UBERON:0001009!1.57e-09!113;UBERON:0004111!2.87e-09!241;UBERON:0000468!4.44e-09!659;UBERON:0002097!4.83e-09!40;UBERON:0004211!7.19e-09!16;UBERON:0001285!7.19e-09!16;UBERON:0007684!7.19e-09!16;UBERON:0003220!7.19e-09!16;UBERON:0004208!7.19e-09!16;UBERON:0000353!8.00e-09!17;UBERON:0004876!9.40e-09!20;UBERON:0000080!9.68e-09!18;UBERON:0002120!9.68e-09!18;UBERON:0004875!9.68e-09!18;UBERON:0005721!9.68e-09!18;UBERON:0005754!9.68e-09!18;UBERON:0007297!9.68e-09!18;UBERON:0004290!1.06e-08!70;UBERON:0000487!1.45e-08!22;UBERON:0006555!1.98e-08!17;UBERON:0005103!1.98e-08!17;UBERON:0000083!1.98e-08!17;UBERON:0009201!1.98e-08!17;UBERON:0004819!1.98e-08!17;UBERON:0006553!1.98e-08!17;UBERON:0003074!1.98e-08!17;UBERON:0003060!1.98e-08!17;UBERON:0001048!4.32e-08!168;UBERON:0001637!1.01e-07!42;UBERON:0003509!1.01e-07!42;UBERON:0004572!1.01e-07!42;UBERON:0002113!1.98e-07!27;UBERON:0003918!1.98e-07!27;UBERON:0005095!1.98e-07!27;UBERON:0007687!1.98e-07!27;UBERON:0006914!2.34e-07!25;UBERON:0001444!2.72e-07!48;UBERON:0003887!4.01e-07!21;UBERON:0001225!4.45e-07!13;UBERON:0008987!4.45e-07!13;UBERON:0005172!7.13e-07!55;UBERON:0005173!7.13e-07!55;UBERON:0000466!7.70e-07!126;UBERON:0001986!7.74e-07!18;UBERON:0004638!7.74e-07!18;UBERON:0004852!7.74e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.59e-09;15!UBERON:0004819;1.59e-09;15!UBERON:0001285;1.59e-09;15!UBERON:0007684;1.59e-09;15!UBERON:0000353;3.11e-09;15!UBERON:0003914;4.37e-09;74!UBERON:0000487;8.92e-09;22!UBERON:0000490;6.77e-08;33!UBERON:0001225;1.17e-07;12!UBERON:0008987;1.17e-07;12!UBERON:0006914;1.34e-07;25!UBERON:0002097;2.17e-07;41!UBERON:0002113;4.44e-07;24!UBERON:0011143;4.44e-07;24!UBERON:0004638;5.37e-07;18!UBERON:0001986;5.37e-07;18!UBERON:0004852;5.37e-07;18!UBERON:0003102;5.88e-07;50!UBERON:0000055;6.23e-07;65!UBERON:0001456;7.18e-07;21!UBERON:0002049;8.03e-07;75!UBERON:0007798;8.03e-07;75!UBERON:0006554;8.34e-07;30!UBERON:0001008;8.34e-07;30!UBERON:0010371;9.19e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.58e-19,117;UBERON:0000490,5.51e-16,148;UBERON:0002049,1.03e-14,78;UBERON:0007798,1.03e-14,78;UBERON:0000119,3.08e-13,309;UBERON:0000483,9.74e-13,306;UBERON:0000055,3.20e-12,68;UBERON:0003104,3.68e-12,160;UBERON:0009142,3.68e-12,160;UBERON:0007503,5.43e-12,78;UBERON:0004872,9.07e-12,83;UBERON:0003102,1.82e-11,99;UBERON:0005256,2.19e-11,122;UBERON:0002100,5.60e-11,199;UBERON:0004535,1.62e-10,109;UBERON:0007500,3.72e-10,59;UBERON:0001981,3.72e-10,59;UBERON:0004537,3.72e-10,59;UBERON:0006965,3.72e-10,59;UBERON:0002199,4.54e-10,46;UBERON:0002416,4.54e-10,46;UBERON:0000486,4.85e-10,83;UBERON:0001009,6.98e-10,112;UBERON:0004211,1.55e-09,15;UBERON:0009773,1.55e-09,15;UBERON:0001231,1.55e-09,15;UBERON:0001285,1.55e-09,15;UBERON:0007684,1.55e-09,15;UBERON:0004208,1.55e-09,15;UBERON:0002097,2.26e-09,41;UBERON:0000353,3.14e-09,15;UBERON:0006555,4.98e-09,16;UBERON:0004819,4.98e-09,16;UBERON:0002329,5.55e-09,71;UBERON:0003059,5.55e-09,71;UBERON:0007282,5.55e-09,71;UBERON:0004290,5.55e-09,71;UBERON:0009618,5.55e-09,71;UBERON:0007524,6.97e-09,73;UBERON:0000487,7.81e-09,22;UBERON:0003077,1.48e-08,72;UBERON:0007285,1.48e-08,72;UBERON:0001048,2.75e-08,160;UBERON:0001637,1.03e-07,42;UBERON:0003509,1.03e-07,42;UBERON:0004572,1.03e-07,42;UBERON:0006914,1.15e-07,25;UBERON:0001225,1.18e-07,12;UBERON:0008987,1.18e-07,12;UBERON:0000058,2.34e-07,19;UBERON:0004111,2.99e-07,240;UBERON:0002113,3.66e-07,26;UBERON:0003918,3.66e-07,26;UBERON:0011143,3.66e-07,26;UBERON:0005095,3.66e-07,26;UBERON:0007687,3.66e-07,26;UBERON:0000033,3.77e-07,56;UBERON:0004638,4.85e-07,18;UBERON:0001986,4.85e-07,18;UBERON:0004852,4.85e-07,18;UBERON:0001444,9.96e-07,49 | |||
|phase1_expression=2.18014055124668,3.63970890614671,0.986680828671798,4.00293193412522,0,4.36169262050184,15.1979926900986,12.6343974685366,0,15.9727058725981,21.6318362071453,37.7903573785198,36.3998429955266,4.70312141248177,7.95353701746998,8.74022690387308,8.43772339233568,9.49403117503585,14.6379839637152,25.1166958476647,32.8441112903247,14.105462466514,8.87331560106276,20.2574149107869,49.3382573607575,0.229240217243854,0.492603536699674,0.314843125254717,0,0,0.154816123316076,14.7107395916628,22.891649827147,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,9.75227465255847,10.7312137552582,9.71755470010831,15.1804444001518,13.536123587169,6.37324683427624,21.4727205703797,8.75942766544745,13.7075484887898,35.6984329914728,22.6613747088265,7.46580730336962,26.229260757063,21.5054976814969,0.324547393654683,0.174129737299267,0,0,0,0,12.124506849369,42.1514951602001,26.7298186237848,24.3082415027324,14.6824802673467,25.5859779004263,23.6164312186596,41.0882647079233,54.4322381910667,29.455413923291,8.86224497640123,6.84244895146661,12.6912269925048,11.3975554907219,45.3679490813785,24.2895260932697,24.0246428710002,22.8601305381144,36.795992991812,33.2242980848845,33.5259191392645,0,0,5.23312862571041,28.3274012466332,22.286970052966,7.81214166797991,13.7681577959431,11.7040566125458,20.7450712052654,9.60740961567345,35.520126972071,12.4484414159907,7.9479296521116,8.3365570587864,4.38936540170301,4.60940739583999,33.2736433203991,17.1688042256676,25.6712319695002,12.5536891663513,44.1553714900556,44.353186756868,31.4609807013037,11.2284794190191,20.5133309910652,7.85275936935817,9.50402285825643,8.65434252474949,22.7540340484507,21.5585442544872,12.1202002046928,16.3905261032273,10.528436388399,22.3878586649227,28.5033650093088,9.91571188783539,7.48652408856139,38.7481613087942,27.5489031575952,12.7159140695737,33.3101116653687,19.0647179091112,20.6112432036503,20.4728541964749,30.2109634711867,20.3643340786905,27.2628476183644,21.9999257755095,10.5069936932228,56.0915156176251,41.0061039786496,22.8906799619158,27.6363020023514,52.0945090328494,28.3936549435114,0.487894824518382,0.662648841607426,1.85910308591229,1.65857688024593,0.504641701751257,0.36497735907583,21.9029345261742,12.2215778256648,26.2456350569713,5.57241513638375,3.60939740834793,5.20549920175313,6.57480291304597,6.98931986662098,6.72793233667603,6.10062443458737,6.64357733511071,3.50561401216427,4.12065076763227,3.07797725557112,56.8379700060979,49.084620831206,20.1671265552386,8.82052268313252,11.4079531339648,52.0898424839142,15.9513274803979,0,1.22988438543114,18.0146200813452,29.303326204103,4.49607013030478,6.43385423434437,6.29601427078001,9.44844085399942,15.5990217791937,34.6395220860656,9.73815401790645,21.0161562682121,13.5704460895409,31.0200293426329,8.75169100279152,0,0,0,0,0,37.4935335947108,36.2841396909537,36.4361999912933,6.80644772541647,6.97521452433509,11.5014803749563,2.46331618947972,13.8236041400765,0.207328115540772,0.432359860250884,0.37872730027914,9.65167993240969,16.8074907245642,49.2313278282197,32.503764744314,16.7608813106417,24.6281307432012,35.4424776461917,13.7921233744794,19.6182030974976,11.4407725880682,24.3030825624622,10.7296933755565,16.90605505112,22.604739909714,26.0018592278415,23.4058710578549,17.0218958427934,40.7625933894632,0.714889968290738,0,6.58592269424615,13.0294473717494,0,3.95975936466715,13.2633325906218,25.2744702994085,24.493382839604,0,0,0,9.82461907515489,3.44585807502342,18.5427976552934,13.75422413342,13.7669136108757,6.08807275015645,0,0,0,0,0,1.30139853857622,3.09315525111078,2.51274398001523,5.10351001322531,0,0,0,6.50264906111441,11.5039219843726,17.0896964930833,12.2702808303176,18.1997568573105,16.874158408631,23.1940001685572,9.93122129101472,13.6444502433591,15.5209606938757,20.5909935545985,34.1082961802151,11.555520724255,6.46143819627044,8.92172901908225,0,0,0,9.09382714338778,21.6366071363646,20.5625399464183,8.18755765801964,11.6631099698927,9.82310330515758,7.30393150757495,7.16390148693385,11.903190164627,2.96836132889982,41.3281979391117,41.1943202726455,33.7542611216756,16.6161417338759,41.2546843532855,0.846016147141356,31.8805287782223,3.22283461275637,6.19998020088876,10.3791965763829,5.11385218341754,25.2671783228151,24.4908771992039,33.7270400746048,64.3012588474347,41.4817901549001,55.7293581947393,35.8897718133448,38.2171171500787,63.2331736030186,33.3264118178939,51.6740467070499,25.4876273045038,26.5944322857192,25.073972528884,0,0,30.2611147637339,65.2749144942414,39.3707857543807,22.0507764926126,2.83865340936865,3.63041799650587,24.6934181338354,15.6014459048765,32.1367859688319,20.590862996222,17.7155909681841,12.4337976528165,25.0862561921846,8.70103983433016,9.1360517165964,19.0907645412066,17.8064071293475,9.58652509093673,15.759585523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| |||
|short_description=p1@FAM176A | |||
}} |
Latest revision as of 12:48, 18 September 2015
Short description: | p1@FAM176A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM176A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393913, ENST00000410113, ENST00000485891, ENST00000490746_5end |
EntrezGene: | FAM176A |
HGNC: | 25816 |
UniProt: | Q9H8M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.61e-27 | 250 |
mesodermal cell | 1.09e-19 | 121 |
epithelial cell | 1.82e-17 | 253 |
fibroblast | 1.69e-16 | 76 |
lining cell | 2.28e-12 | 58 |
barrier cell | 2.28e-12 | 58 |
endothelial cell | 3.96e-11 | 36 |
meso-epithelial cell | 3.78e-10 | 45 |
skin fibroblast | 6.28e-10 | 23 |
kidney cell | 6.34e-10 | 17 |
kidney epithelial cell | 6.34e-10 | 17 |
epithelial cell of nephron | 1.55e-09 | 15 |
endothelial cell of vascular tree | 3.36e-09 | 24 |
kidney cortical cell | 1.18e-07 | 12 |
renal cortical epithelial cell | 1.18e-07 | 12 |
squamous epithelial cell | 1.41e-07 | 63 |
muscle precursor cell | 2.86e-07 | 58 |
myoblast | 2.86e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.86e-07 | 58 |
blood vessel endothelial cell | 4.85e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.85e-07 | 18 |
muscle cell | 5.12e-07 | 55 |