FFCP PHASE1:Hg19::chr2:74666983..74667014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6242 | |EntrezGene=6242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10466 | |HGNC=10466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=309bp_to_ENST00000460968_5end | |association_with_transcript=309bp_to_ENST00000460968_5end | ||
|cluster_id=chr2:74666983..74667014,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_RTKN_5end | |description=CAGE_peak_4_at_RTKN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.71e-22;82!UBERON:0006241;3.19e-13;3!UBERON:0003057;3.19e-13;3!UBERON:0002532;3.73e-07;206!UBERON:0010316;3.73e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;4.71e-22;82!UBERON:0006241;3.19e-13;3!UBERON:0003057;3.19e-13;3!UBERON:0002532;3.73e-07;206!UBERON:0010316;3.73e-07;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-72!115;UBERON:0001049!4.25e-68!57;UBERON:0005068!4.25e-68!57;UBERON:0006241!4.25e-68!57;UBERON:0007135!4.25e-68!57;UBERON:0001017!1.31e-59!82;UBERON:0005743!1.58e-58!86;UBERON:0002616!1.41e-55!59;UBERON:0000073!3.45e-54!94;UBERON:0001016!3.45e-54!94;UBERON:0000955!5.29e-53!69;UBERON:0006238!5.29e-53!69;UBERON:0002780!7.60e-53!41;UBERON:0001890!7.60e-53!41;UBERON:0006240!7.60e-53!41;UBERON:0003075!1.05e-51!86;UBERON:0007284!1.05e-51!86;UBERON:0003080!2.28e-51!42;UBERON:0002020!1.71e-49!34;UBERON:0003528!1.71e-49!34;UBERON:0001893!2.48e-49!34;UBERON:0002346!8.92e-49!90;UBERON:0002791!2.34e-47!33;UBERON:0001869!7.05e-45!32;UBERON:0002619!1.27e-39!22;UBERON:0001950!1.59e-35!20;UBERON:0003056!1.82e-34!61;UBERON:0000956!2.74e-34!25;UBERON:0000203!2.74e-34!25;UBERON:0004121!1.40e-32!169;UBERON:0000924!1.86e-31!173;UBERON:0006601!1.86e-31!173;UBERON:0000033!7.28e-30!123;UBERON:0000153!7.52e-28!129;UBERON:0007811!7.52e-28!129;UBERON:0000025!1.08e-20!194;UBERON:0004111!8.85e-18!241;UBERON:0003076!4.42e-17!15;UBERON:0003057!4.42e-17!15;UBERON:0002308!1.39e-16!9;UBERON:0000125!1.39e-16!9;UBERON:0002420!3.09e-16!9;UBERON:0007245!3.09e-16!9;UBERON:0010009!3.09e-16!9;UBERON:0010011!3.09e-16!9;UBERON:0000454!3.09e-16!9;UBERON:0000483!2.75e-15!309;UBERON:0000119!5.61e-15!312;UBERON:0000477!1.09e-14!286;UBERON:0002298!2.72e-14!8;UBERON:0000200!7.04e-14!6;UBERON:0001871!8.08e-14!7;UBERON:0004732!2.18e-13!13;UBERON:0009663!2.92e-12!7;UBERON:0000349!9.78e-12!5;UBERON:0000475!1.21e-11!365;UBERON:0002021!1.36e-11!5;UBERON:0004733!2.02e-11!12;UBERON:0002028!2.02e-11!12;UBERON:0007277!2.02e-11!12;UBERON:0000064!2.97e-11!219;UBERON:0000062!5.99e-09!511;UBERON:0006331!2.09e-08!3;UBERON:0000481!3.80e-08!347;UBERON:0000988!3.94e-08!3;UBERON:0002240!4.74e-08!3;UBERON:0002771!4.85e-08!3;UBERON:0001896!8.77e-08!3;UBERON:0005290!8.77e-08!3;UBERON:0010096!8.77e-08!3;UBERON:0001872!8.89e-08!5;UBERON:0002050!2.60e-07!605;UBERON:0005423!2.60e-07!605;UBERON:0000922!5.37e-07!612;UBERON:0000467!6.97e-07!625;UBERON:0000923!7.35e-07!604;UBERON:0005291!7.35e-07!604;UBERON:0006598!7.35e-07!604;UBERON:0002532!7.35e-07!604;UBERON:0000480!7.71e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!3.68e-72!115;UBERON:0001049!4.25e-68!57;UBERON:0005068!4.25e-68!57;UBERON:0006241!4.25e-68!57;UBERON:0007135!4.25e-68!57;UBERON:0001017!1.31e-59!82;UBERON:0005743!1.58e-58!86;UBERON:0002616!1.41e-55!59;UBERON:0000073!3.45e-54!94;UBERON:0001016!3.45e-54!94;UBERON:0000955!5.29e-53!69;UBERON:0006238!5.29e-53!69;UBERON:0002780!7.60e-53!41;UBERON:0001890!7.60e-53!41;UBERON:0006240!7.60e-53!41;UBERON:0003075!1.05e-51!86;UBERON:0007284!1.05e-51!86;UBERON:0003080!2.28e-51!42;UBERON:0002020!1.71e-49!34;UBERON:0003528!1.71e-49!34;UBERON:0001893!2.48e-49!34;UBERON:0002346!8.92e-49!90;UBERON:0002791!2.34e-47!33;UBERON:0001869!7.05e-45!32;UBERON:0002619!1.27e-39!22;UBERON:0001950!1.59e-35!20;UBERON:0003056!1.82e-34!61;UBERON:0000956!2.74e-34!25;UBERON:0000203!2.74e-34!25;UBERON:0004121!1.40e-32!169;UBERON:0000924!1.86e-31!173;UBERON:0006601!1.86e-31!173;UBERON:0000033!7.28e-30!123;UBERON:0000153!7.52e-28!129;UBERON:0007811!7.52e-28!129;UBERON:0000025!1.08e-20!194;UBERON:0004111!8.85e-18!241;UBERON:0003076!4.42e-17!15;UBERON:0003057!4.42e-17!15;UBERON:0002308!1.39e-16!9;UBERON:0000125!1.39e-16!9;UBERON:0002420!3.09e-16!9;UBERON:0007245!3.09e-16!9;UBERON:0010009!3.09e-16!9;UBERON:0010011!3.09e-16!9;UBERON:0000454!3.09e-16!9;UBERON:0000483!2.75e-15!309;UBERON:0000119!5.61e-15!312;UBERON:0000477!1.09e-14!286;UBERON:0002298!2.72e-14!8;UBERON:0000200!7.04e-14!6;UBERON:0001871!8.08e-14!7;UBERON:0004732!2.18e-13!13;UBERON:0009663!2.92e-12!7;UBERON:0000349!9.78e-12!5;UBERON:0000475!1.21e-11!365;UBERON:0002021!1.36e-11!5;UBERON:0004733!2.02e-11!12;UBERON:0002028!2.02e-11!12;UBERON:0007277!2.02e-11!12;UBERON:0000064!2.97e-11!219;UBERON:0000062!5.99e-09!511;UBERON:0006331!2.09e-08!3;UBERON:0000481!3.80e-08!347;UBERON:0000988!3.94e-08!3;UBERON:0002240!4.74e-08!3;UBERON:0002771!4.85e-08!3;UBERON:0001896!8.77e-08!3;UBERON:0005290!8.77e-08!3;UBERON:0010096!8.77e-08!3;UBERON:0001872!8.89e-08!5;UBERON:0002050!2.60e-07!605;UBERON:0005423!2.60e-07!605;UBERON:0000922!5.37e-07!612;UBERON:0000467!6.97e-07!625;UBERON:0000923!7.35e-07!604;UBERON:0005291!7.35e-07!604;UBERON:0006598!7.35e-07!604;UBERON:0002532!7.35e-07!604;UBERON:0000480!7.71e-07!626 | ||
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|short_description=p4@RTKN | |short_description=p4@RTKN | ||
}} | }} |
Latest revision as of 10:59, 18 September 2015
Short description: | p4@RTKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RTKN_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 309bp_to_ENST00000460968_5end |
EntrezGene: | RTKN |
HGNC: | 10466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data