FFCP PHASE1:Hg19::chr8:4852426..4852444,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |||
|TSSclassifier=strong | |||
|UniProt=E5RIG2 | |||
|association_with_transcript=49bp_to_ENST00000520002_5end | |||
|cluster_id=chr8:4852426..4852444,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_CSMD1_5end | |||
|id=chr8:4852426..4852444,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.26e-19;82!UBERON:0006215;1.80e-13;3!UBERON:0006241;1.21e-12;3!UBERON:0003057;1.21e-12;3!UBERON:0010122;2.58e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.27e-82!57;UBERON:0005068!2.27e-82!57;UBERON:0006241!2.27e-82!57;UBERON:0007135!2.27e-82!57;UBERON:0001017!1.12e-76!82;UBERON:0005743!1.49e-72!86;UBERON:0001893!6.03e-70!34;UBERON:0002020!7.14e-70!34;UBERON:0003528!7.14e-70!34;UBERON:0002616!5.66e-68!59;UBERON:0002791!2.39e-67!33;UBERON:0001869!1.27e-65!32;UBERON:0000955!2.84e-65!69;UBERON:0006238!2.84e-65!69;UBERON:0002780!1.47e-64!41;UBERON:0001890!1.47e-64!41;UBERON:0006240!1.47e-64!41;UBERON:0000073!1.61e-64!94;UBERON:0001016!1.61e-64!94;UBERON:0002346!1.65e-63!90;UBERON:0003080!7.93e-63!42;UBERON:0003075!4.22e-61!86;UBERON:0007284!4.22e-61!86;UBERON:0002619!5.13e-56!22;UBERON:0001950!5.58e-51!20;UBERON:0000956!8.98e-49!25;UBERON:0000203!8.98e-49!25;UBERON:0007023!9.60e-49!115;UBERON:0003056!4.42e-43!61;UBERON:0000924!2.73e-35!173;UBERON:0006601!2.73e-35!173;UBERON:0000033!2.87e-35!123;UBERON:0000153!1.10e-34!129;UBERON:0007811!1.10e-34!129;UBERON:0004121!3.50e-33!169;UBERON:0002420!8.39e-23!9;UBERON:0007245!8.39e-23!9;UBERON:0010009!8.39e-23!9;UBERON:0010011!8.39e-23!9;UBERON:0000454!8.39e-23!9;UBERON:0002308!3.17e-22!9;UBERON:0000125!3.17e-22!9;UBERON:0000025!5.10e-20!194;UBERON:0003076!1.20e-19!15;UBERON:0003057!1.20e-19!15;UBERON:0009663!1.33e-17!7;UBERON:0000200!2.32e-17!6;UBERON:0001871!2.56e-17!7;UBERON:0002021!1.09e-14!5;UBERON:0001872!1.28e-14!5;UBERON:0000349!2.92e-14!5;UBERON:0004111!9.79e-14!241;UBERON:0004733!2.81e-13!12;UBERON:0002028!2.81e-13!12;UBERON:0007277!2.81e-13!12;UBERON:0000064!1.30e-12!219;UBERON:0004732!3.85e-12!13;UBERON:0000369!2.29e-11!4;UBERON:0002435!2.29e-11!4;UBERON:0000204!2.29e-11!4;UBERON:0010082!2.29e-11!4;UBERON:0000477!4.02e-11!286;UBERON:0002298!4.63e-11!8;UBERON:0000483!1.31e-10!309;UBERON:0002680!1.51e-10!9;UBERON:0001895!1.51e-10!9;UBERON:0010092!1.51e-10!9;UBERON:0000119!2.18e-10!312;UBERON:0002771!9.52e-10!3;UBERON:0005383!6.05e-09!3;UBERON:0005382!6.05e-09!3;UBERON:0002240!9.29e-09!3;UBERON:0000988!1.46e-08!3;UBERON:0006331!2.93e-08!3;UBERON:0000475!8.41e-08!365;UBERON:0001876!6.68e-07!2;UBERON:0001870!7.06e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.07e-85;22!UBERON:0001869;5.04e-78;32!UBERON:0001950;1.51e-77;20!UBERON:0003528;2.20e-76;34!UBERON:0002020;2.20e-76;34!UBERON:0000956;9.22e-75;25!UBERON:0000203;9.22e-75;25!UBERON:0002791;1.02e-72;32!UBERON:0001893;1.72e-71;34!UBERON:0002780;1.75e-55;41!UBERON:0001890;1.75e-55;41!UBERON:0000073;8.87e-50;53!UBERON:0002616;8.87e-50;53!UBERON:0001017;4.74e-39;75!UBERON:0000955;1.79e-38;68!UBERON:0001016;3.92e-33;83!UBERON:0000200;8.37e-26;6!UBERON:0001871;8.89e-22;6!UBERON:0002021;1.12e-21;5!UBERON:0001872;1.61e-21;5!UBERON:0000349;6.83e-21;5!UBERON:0000369;1.61e-16;4!UBERON:0002435;1.61e-16;4!UBERON:0000204;1.61e-16;4!UBERON:0002420;3.92e-16;9!UBERON:0007245;3.92e-16;9!UBERON:0010009;3.92e-16;9!UBERON:0010011;3.92e-16;9!UBERON:0000454;3.92e-16;9!UBERON:0002680;8.65e-16;9!UBERON:0001895;8.65e-16;9!UBERON:0004733;1.34e-15;12!UBERON:0002028;1.34e-15;12!UBERON:0000125;1.49e-15;9!UBERON:0002308;1.49e-15;9!UBERON:0004732;2.50e-14;13!UBERON:0007023;2.84e-14;114!UBERON:0001870;7.87e-14;3!UBERON:0011216;6.38e-13;132!UBERON:0005383;7.73e-13;3!UBERON:0005382;7.73e-13;3!UBERON:0002240;1.21e-12;3!UBERON:0005174;1.21e-12;3!UBERON:0001137;1.21e-12;3!UBERON:0000988;2.89e-12;3!UBERON:0002298;1.62e-10;6!UBERON:0002702;4.98e-10;2!UBERON:0002771;6.06e-10;2!UBERON:0001876;9.96e-10;2!UBERON:0009663;1.73e-09;7!UBERON:0001873;2.58e-09;2!UBERON:0001954;3.25e-09;2!UBERON:0003022;3.25e-09;2!UBERON:0002421;3.25e-09;2!UBERON:0002600;3.25e-09;2!UBERON:0010314;7.96e-09;132!UBERON:0002148;8.02e-09;2!UBERON:0006331;8.02e-09;2!UBERON:0009662;8.02e-09;2!UBERON:0002037;6.09e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.38e-103,56;UBERON:0005068,4.38e-103,56;UBERON:0006241,4.38e-103,56;UBERON:0007135,4.38e-103,56;UBERON:0000073,1.22e-92,53;UBERON:0002616,1.22e-92,53;UBERON:0001017,2.36e-88,81;UBERON:0003528,2.48e-88,34;UBERON:0002020,2.48e-88,34;UBERON:0001869,8.47e-88,32;UBERON:0002619,2.46e-85,22;UBERON:0000955,9.24e-83,68;UBERON:0006238,9.24e-83,68;UBERON:0001893,2.12e-82,34;UBERON:0002791,3.62e-81,32;UBERON:0001016,7.74e-79,89;UBERON:0002780,7.22e-78,41;UBERON:0001890,7.22e-78,41;UBERON:0003080,7.22e-78,41;UBERON:0006240,7.22e-78,41;UBERON:0001950,1.36e-77,20;UBERON:0000956,7.58e-75,25;UBERON:0000203,7.58e-75,25;UBERON:0002346,5.50e-72,86;UBERON:0003075,4.02e-68,82;UBERON:0007284,4.02e-68,82;UBERON:0010371,4.72e-52,104;UBERON:0003056,1.83e-50,61;UBERON:0007023,4.19e-44,114;UBERON:0010314,9.67e-42,132;UBERON:0004121,1.34e-41,171;UBERON:0000924,1.34e-41,171;UBERON:0006601,1.34e-41,171;UBERON:0011216,6.53e-30,223;UBERON:0000200,1.03e-25,6;UBERON:0003076,7.17e-25,15;UBERON:0003057,7.17e-25,15;UBERON:0000025,2.22e-24,192;UBERON:0001871,6.91e-22,6;UBERON:0002021,1.28e-21,5;UBERON:0001872,1.65e-21,5;UBERON:0000349,5.79e-21,5;UBERON:0004111,8.45e-18,240;UBERON:0000369,1.55e-16,4;UBERON:0002435,1.55e-16,4;UBERON:0000204,1.55e-16,4;UBERON:0010082,1.55e-16,4;UBERON:0002420,3.82e-16,9;UBERON:0007245,3.82e-16,9;UBERON:0010009,3.82e-16,9;UBERON:0010011,3.82e-16,9;UBERON:0000454,3.82e-16,9;UBERON:0002680,8.77e-16,9;UBERON:0001895,8.77e-16,9;UBERON:0010092,8.77e-16,9;UBERON:0004733,1.28e-15,12;UBERON:0002028,1.28e-15,12;UBERON:0007277,1.28e-15,12;UBERON:0000125,1.49e-15,9;UBERON:0002308,1.49e-15,9;UBERON:0004732,2.40e-14,13;UBERON:0001870,8.76e-14,3;UBERON:0005383,7.73e-13,3;UBERON:0005382,7.73e-13,3;UBERON:0002240,1.48e-12,3;UBERON:0005174,1.48e-12,3;UBERON:0001137,1.48e-12,3;UBERON:0000988,2.94e-12,3;UBERON:0000483,4.07e-12,306;UBERON:0000119,6.46e-12,309;UBERON:0002298,1.54e-10,6;UBERON:0002702,5.44e-10,2;UBERON:0002771,5.68e-10,2;UBERON:0001876,9.96e-10,2;UBERON:0009663,1.70e-09,7;UBERON:0001873,2.75e-09,2;UBERON:0010122,2.75e-09,2;UBERON:0001954,2.87e-09,2;UBERON:0003022,2.87e-09,2;UBERON:0002421,2.87e-09,2;UBERON:0002600,2.87e-09,2;UBERON:0002148,8.36e-09,2;UBERON:0006331,8.36e-09,2;UBERON:0009662,8.36e-09,2;UBERON:0000923,1.25e-07,560;UBERON:0010316,1.25e-07,560;UBERON:0005291,1.25e-07,560;UBERON:0006598,1.25e-07,560;UBERON:0010317,1.25e-07,560;UBERON:0002532,1.25e-07,560;UBERON:0002050,1.67e-07,564;UBERON:0005423,5.36e-07,581;UBERON:0002037,6.09e-07,6;UBERON:0006215,6.09e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,11.9297717731956,6.18945432206256,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,3.4324196319885,7.98455192004777,0,0,0,0,0,0,0,0,0,6.20018970069687,4.22087535188928,6.10326945268333,9.50981635408532,5.91095237907095,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,1.40558667435203,0,0,0,0,0,6.42752799424029,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,5.19148526838205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,3.97614844904652,6.40156008724405,0,0,0,0,0,5.77120788251234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74920573448497,2.11572162788304,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,15.0631590594388,8.66386480803938,11.767947486411,0,0.998361463831671,1.55241007353459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.899720157449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61377364172861,0,0,0,0,0,0,0,4.56027498184863,14.1696576325585,14.0477795970293,4.30744364905586,15.3763734695248,5.18679393481634,10.818868257334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14592020027391,10.15401528198,14.8814493480853,4.75618576454301,31.1775641140385,0,0,5.27613733078862,0,0,0,0,0,0,0,0,1.2914249265598,4.14368473445949,0,0,0,2.67096502857203,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,4.3187862765288,1.18818560130834,5.0718687310008,0,0,0,0,0,0,0,0,0,0.143339583151451,0,4.75940431336403,15.2722741619132,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.535928260312357,0,1.24119595034274,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CSMD1 | |||
}} |
Latest revision as of 09:37, 18 September 2015
Short description: | p5@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSMD1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 49bp_to_ENST00000520002_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | E5RIG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data