FFCP PHASE1:Hg19::chr1:46769261..46769302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10489 | |EntrezGene=10489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16917 | |HGNC=16917 | ||
|TSSclassifier=strong | |||
|UniProt=Q15345 | |UniProt=Q15345 | ||
|association_with_transcript=0bp_to_ENST00000343304_5end | |association_with_transcript=0bp_to_ENST00000343304_5end | ||
|cluster_id=chr1:46769261..46769302,- | |||
|description=CAGE_peak_5_at_LRRC41_5end | |description=CAGE_peak_5_at_LRRC41_5end | ||
|id=chr1:46769261..46769302,- | |id=chr1:46769261..46769302,- | ||
|ontology_enrichment_celltype=CL:0000220!2.76e-30!246;CL:0002321!4.65e-30!248;CL:0000222!5.16e-24!119;CL:0000055!1.17e-21!180;CL:0000548!8.06e-21!679;CL:0000004!8.06e-21!679;CL:0000255!8.06e-21!679;CL:0000012!3.45e-20!682;CL:0000144!9.18e-20!625;CL:0002371!2.44e-17!591;CL:0000066!5.38e-16!254;CL:0000183!2.01e-14!59;CL:0000680!2.62e-13!57;CL:0000056!2.62e-13!57;CL:0000355!2.62e-13!57;CL:0000192!6.04e-13!42;CL:0000514!6.04e-13!42;CL:0000187!9.41e-13!54;CL:0000003!2.95e-12!722;CL:0000393!1.38e-11!60;CL:0000211!1.38e-11!60;CL:0000057!4.36e-11!75;CL:0000359!5.89e-11!32;CL:0000213!1.61e-10!57;CL:0000215!1.61e-10!57;CL:1000449!1.03e-09!16;CL:0002078!1.28e-09!44;CL:1000497!2.70e-09!18;CL:0002518!2.70e-09!18;CL:0000115!4.36e-08!35;CL:0002681!4.79e-08!13;CL:0002584!4.79e-08!13;CL:1000507!1.30e-07!12;CL:1000494!1.30e-07!12 | |ontology_enrichment_celltype=CL:0000220!2.76e-30!246;CL:0002321!4.65e-30!248;CL:0000222!5.16e-24!119;CL:0000055!1.17e-21!180;CL:0000548!8.06e-21!679;CL:0000004!8.06e-21!679;CL:0000255!8.06e-21!679;CL:0000012!3.45e-20!682;CL:0000144!9.18e-20!625;CL:0002371!2.44e-17!591;CL:0000066!5.38e-16!254;CL:0000183!2.01e-14!59;CL:0000680!2.62e-13!57;CL:0000056!2.62e-13!57;CL:0000355!2.62e-13!57;CL:0000192!6.04e-13!42;CL:0000514!6.04e-13!42;CL:0000187!9.41e-13!54;CL:0000003!2.95e-12!722;CL:0000393!1.38e-11!60;CL:0000211!1.38e-11!60;CL:0000057!4.36e-11!75;CL:0000359!5.89e-11!32;CL:0000213!1.61e-10!57;CL:0000215!1.61e-10!57;CL:1000449!1.03e-09!16;CL:0002078!1.28e-09!44;CL:1000497!2.70e-09!18;CL:0002518!2.70e-09!18;CL:0000115!4.36e-08!35;CL:0002681!4.79e-08!13;CL:0002584!4.79e-08!13;CL:1000507!1.30e-07!12;CL:1000494!1.30e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.34e-12;15!CL:1000497;5.46e-12;17!CL:0002518;5.46e-12;17!CL:0002681;1.67e-10;12!CL:0002584;1.67e-10;12!CL:0000115;4.11e-10;36!CL:1000507;2.63e-09;10!CL:1000494;2.63e-09;10!CL:0000359;3.45e-09;32!CL:0000192;6.16e-09;43!CL:0002078;1.18e-08;45!CL:0002139;2.03e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.67e-25,250;CL:0000222,5.11e-25,121;CL:0000680,4.36e-13,58;CL:0000056,4.36e-13,58;CL:0000355,4.36e-13,58;CL:1000449,5.28e-13,15;CL:0002078,1.24e-12,45;CL:0000192,2.28e-12,43;CL:0000514,2.28e-12,43;CL:0000187,2.42e-12,55;CL:1000497,2.44e-12,17;CL:0002518,2.44e-12,17;CL:0000115,5.73e-12,36;CL:0000393,2.63e-11,61;CL:0000211,2.63e-11,61;CL:0000213,3.03e-11,58;CL:0000215,3.03e-11,58;CL:0002681,9.81e-11,12;CL:0002584,9.81e-11,12;CL:0000359,2.04e-10,32;CL:0000066,3.34e-10,253;CL:1000507,1.72e-09,10;CL:1000494,1.72e-09,10;CL:0000057,2.08e-08,76;CL:0002139,6.17e-08,24;CL:1000746,7.26e-07,7;CL:1000612,7.26e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000514;6.16e-09;43!CL:0000222;3.97e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;1.34e-12;15!UBERON:0004819;1.34e-12;15!UBERON:0001285;1.34e-12;15!UBERON:0007684;1.34e-12;15!UBERON:0003914;1.59e-11;74!UBERON:0000353;4.37e-11;15!UBERON:0001225;1.67e-10;12!UBERON:0008987;1.67e-10;12!UBERON:0001637;4.79e-10;42!UBERON:0003509;4.79e-10;42!UBERON:0004572;4.79e-10;42!UBERON:0004573;4.88e-10;33!UBERON:0004571;4.88e-10;33!UBERON:0002113;8.13e-10;24!UBERON:0011143;8.13e-10;24!UBERON:0006554;1.04e-09;30!UBERON:0001008;1.04e-09;30!UBERON:0000055;2.42e-09;65!UBERON:0004211;2.63e-09;10!UBERON:0009773;2.63e-09;10!UBERON:0001231;2.63e-09;10!UBERON:0004810;2.63e-09;10!UBERON:0007500;6.76e-09;56!UBERON:0001981;6.76e-09;56!UBERON:0004537;6.76e-09;56!UBERON:0002049;8.23e-09;75!UBERON:0007798;8.23e-09;75!UBERON:0000025;1.42e-08;93!UBERON:0001851;1.59e-08;15!UBERON:0000947;4.51e-07;21!UBERON:0010191;4.51e-07;21!UBERON:0000489;6.59e-07;29 | |||
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| ||
|short_description=p5@LRRC41 | |short_description=p5@LRRC41 | ||
}} | }} |
Latest revision as of 08:54, 18 September 2015
Short description: | p5@LRRC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC41_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343304_5end |
EntrezGene: | LRRC41 |
HGNC: | 16917 |
UniProt: | Q15345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.67e-25 | 250 |
mesodermal cell | 5.11e-25 | 121 |
muscle precursor cell | 4.36e-13 | 58 |
myoblast | 4.36e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.36e-13 | 58 |
epithelial cell of nephron | 5.28e-13 | 15 |
meso-epithelial cell | 1.24e-12 | 45 |
smooth muscle cell | 2.28e-12 | 43 |
smooth muscle myoblast | 2.28e-12 | 43 |
muscle cell | 2.42e-12 | 55 |
kidney cell | 2.44e-12 | 17 |
kidney epithelial cell | 2.44e-12 | 17 |
endothelial cell | 5.73e-12 | 36 |
electrically responsive cell | 2.63e-11 | 61 |
electrically active cell | 2.63e-11 | 61 |
lining cell | 3.03e-11 | 58 |
barrier cell | 3.03e-11 | 58 |
kidney cortical cell | 9.81e-11 | 12 |
renal cortical epithelial cell | 9.81e-11 | 12 |
vascular associated smooth muscle cell | 2.04e-10 | 32 |
epithelial cell | 3.34e-10 | 253 |
kidney tubule cell | 1.72e-09 | 10 |
nephron tubule epithelial cell | 1.72e-09 | 10 |
fibroblast | 2.08e-08 | 76 |
endothelial cell of vascular tree | 6.17e-08 | 24 |
glomerular cell | 7.26e-07 | 7 |
kidney corpuscule cell | 7.26e-07 | 7 |