FFCP PHASE1:Hg19::chr10:45406779..45406811,+: Difference between revisions
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|id=chr10:45406779..45406811,+
|short_description=p1@TMEM72
|description=CAGE_peak_1_at_TMEM72_5end
|association_with_transcript=15bp_to_ENST00000544540,NM_00112337...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643236 | |EntrezGene=643236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31658 | |HGNC=31658 | ||
|TSSclassifier=strong | |||
|UniProt=A0PK05 | |UniProt=A0PK05 | ||
|association_with_transcript=15bp_to_ENST00000544540,NM_001123376,uc001jbn.2,uc009xmm.1_5end | |||
|cluster_id=chr10:45406779..45406811,+ | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_1_at_TMEM72_5end | |||
|id=chr10:45406779..45406811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.42e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!3.16e-18!3;UBERON:0005290!3.16e-18!3;UBERON:0010096!3.16e-18!3;UBERON:0000160!1.70e-15!27;UBERON:0001905!1.52e-12!2;UBERON:0002757!1.52e-12!2;UBERON:0010134!1.52e-12!2;UBERON:0002784!1.52e-12!2;UBERON:0005408!1.52e-12!2;UBERON:0001899!1.52e-12!2;UBERON:0002298!9.75e-12!8;UBERON:0005409!1.03e-11!35;UBERON:0007023!6.98e-11!115;UBERON:0001155!7.51e-11!9;UBERON:0001049!8.55e-10!57;UBERON:0005068!8.55e-10!57;UBERON:0006241!8.55e-10!57;UBERON:0007135!8.55e-10!57;UBERON:0002616!2.11e-09!59;UBERON:0000059!6.83e-09!11;UBERON:0002346!5.82e-08!90;UBERON:0004733!7.37e-08!12;UBERON:0002028!7.37e-08!12;UBERON:0007277!7.37e-08!12;UBERON:0000955!1.22e-07!69;UBERON:0006238!1.22e-07!69;UBERON:0004732!2.93e-07!13;UBERON:0001154!3.40e-07!1;UBERON:0001153!3.40e-07!1;UBERON:0003075!3.99e-07!86;UBERON:0007284!3.99e-07!86;UBERON:0005743!5.10e-07!86;UBERON:0002336!8.18e-07!1;UBERON:0001018!8.18e-07!1;UBERON:0002473!8.18e-07!1;UBERON:0005340!8.18e-07!1;UBERON:0002316!8.18e-07!1;UBERON:0003544!8.18e-07!1;UBERON:0001020!8.18e-07!1;UBERON:0005970!8.18e-07!1;UBERON:0002437!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;3.94e-21;9!UBERON:0000059;2.38e-17;11!UBERON:0001896;2.20e-16;3!UBERON:0005290;2.20e-16;3!UBERON:0000160;2.58e-16;17!UBERON:0001154;6.42e-13;1!UBERON:0001153;6.42e-13;1!UBERON:0009854;6.42e-13;1!UBERON:0005409;9.22e-13;22!UBERON:0002298;1.17e-08;6!UBERON:0004921;6.86e-08;33!UBERON:0001905;4.29e-07;2!UBERON:0002757;4.29e-07;2!UBERON:0010134;4.29e-07;2!UBERON:0006955;4.29e-07;2!UBERON:0005408;4.29e-07;2!UBERON:0004801;4.29e-07;2!UBERON:0001899;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,4.61e-21,9;UBERON:0000059,2.71e-17,11;UBERON:0001896,1.74e-16,3;UBERON:0005290,1.74e-16,3;UBERON:0010096,1.74e-16,3;UBERON:0000160,2.75e-16,17;UBERON:0001154,8.64e-13,1;UBERON:0001153,8.64e-13,1;UBERON:0001045,8.64e-13,1;UBERON:0005409,2.91e-11,25;UBERON:0002298,1.04e-08,6;UBERON:0007023,3.13e-07,114;UBERON:0006955,3.93e-07,2;UBERON:0004801,3.93e-07,2;UBERON:0001905,5.60e-07,2;UBERON:0002757,5.60e-07,2;UBERON:0010134,5.60e-07,2;UBERON:0005408,5.60e-07,2;UBERON:0001899,5.60e-07,2 | |||
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|short_description=p1@TMEM72 | |||
}} | }} |
Latest revision as of 06:54, 18 September 2015
Short description: | p1@TMEM72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM72_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 15bp_to_ENST00000544540, NM_001123376, uc001jbn.2, uc009xmm.1_5end |
EntrezGene: | TMEM72 |
HGNC: | 31658 |
UniProt: | A0PK05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
colon | 4.61e-21 | 9 |
large intestine | 2.71e-17 | 11 |
medulla oblongata | 1.74e-16 | 3 |
myelencephalon | 1.74e-16 | 3 |
future myelencephalon | 1.74e-16 | 3 |
intestine | 2.75e-16 | 17 |
vermiform appendix | 8.64e-13 | 1 |
caecum | 8.64e-13 | 1 |
midgut | 8.64e-13 | 1 |
gastrointestinal system | 2.91e-11 | 25 |
brainstem | 1.04e-08 | 6 |
adult organism | 3.13e-07 | 114 |
uterine epithelium | 3.93e-07 | 2 |
cervix epithelium | 3.93e-07 | 2 |
pineal body | 5.60e-07 | 2 |
regional part of epithalamus | 5.60e-07 | 2 |
secretory circumventricular organ | 5.60e-07 | 2 |
circumventricular organ | 5.60e-07 | 2 |
epithalamus | 5.60e-07 | 2 |