FFCP PHASE1:Hg19::chr16:86542652..86542692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400550 | |EntrezGene=400550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-186bp_to_ENST00000501311,NR_033925,NR_036444,uc002fjk.1_5end | |association_with_transcript=-186bp_to_ENST00000501311,NR_033925,NR_036444,uc002fjk.1_5end | ||
|cluster_id=chr16:86542652..86542692,- | |||
|description=CAGE_peak_2_at_LOC400550_5end | |description=CAGE_peak_2_at_LOC400550_5end | ||
|id=chr16:86542652..86542692,- | |id=chr16:86542652..86542692,- | ||
|ontology_enrichment_celltype=CL:0000192!1.02e-08!42;CL:0000514!1.02e-08!42;CL:0002552!1.75e-07!5 | |ontology_enrichment_celltype=CL:0000192!1.02e-08!42;CL:0000514!1.02e-08!42;CL:0002552!1.75e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.02e-11;3!CL:0002504;1.75e-11;3!CL:1000279;1.75e-11;3!CL:1000280;1.75e-11;3!CL:0002556;1.97e-09;6!CL:1000487;1.28e-08;2!CL:0002195;2.99e-08;2!CL:0002571;2.99e-08;2!CL:0002552;5.60e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,5.72e-12,3;CL:0002504,2.04e-11,3;CL:1000279,2.04e-11,3;CL:1000280,2.04e-11,3;CL:0002556,2.27e-09,6;CL:1000487,1.29e-08,2;CL:0002195,3.12e-08,2;CL:0002571,3.12e-08,2;CL:0002552,6.37e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;6.82e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.12e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.76e-18!155;UBERON:0001555!2.76e-18!155;UBERON:0007026!2.76e-18!155;UBERON:0004119!1.15e-16!169;UBERON:0000925!1.15e-16!169;UBERON:0006595!1.15e-16!169;UBERON:0000481!1.77e-14!347;UBERON:0004921!8.63e-13!129;UBERON:0004185!8.63e-13!129;UBERON:0000077!1.26e-10!130;UBERON:0003104!1.96e-10!238;UBERON:0009142!1.96e-10!238;UBERON:0000059!1.42e-08!11;UBERON:0001737!1.45e-08!9;UBERON:0001155!2.26e-08!9;UBERON:0000475!2.56e-08!365;UBERON:0001135!2.91e-08!15;UBERON:0000160!8.71e-08!27;UBERON:0005256!1.18e-07!143;UBERON:0000477!1.19e-07!286;UBERON:0000062!4.43e-07!511;UBERON:0001046!8.84e-07!19;UBERON:0002100!9.00e-07!216 | |ontology_enrichment_uberon=UBERON:0001007!2.76e-18!155;UBERON:0001555!2.76e-18!155;UBERON:0007026!2.76e-18!155;UBERON:0004119!1.15e-16!169;UBERON:0000925!1.15e-16!169;UBERON:0006595!1.15e-16!169;UBERON:0000481!1.77e-14!347;UBERON:0004921!8.63e-13!129;UBERON:0004185!8.63e-13!129;UBERON:0000077!1.26e-10!130;UBERON:0003104!1.96e-10!238;UBERON:0009142!1.96e-10!238;UBERON:0000059!1.42e-08!11;UBERON:0001737!1.45e-08!9;UBERON:0001155!2.26e-08!9;UBERON:0000475!2.56e-08!365;UBERON:0001135!2.91e-08!15;UBERON:0000160!8.71e-08!27;UBERON:0005256!1.18e-07!143;UBERON:0000477!1.19e-07!286;UBERON:0000062!4.43e-07!511;UBERON:0001046!8.84e-07!19;UBERON:0002100!9.00e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.38e-26;17!UBERON:0005409;6.15e-24;22!UBERON:0000059;6.54e-20;11!UBERON:0001155;4.61e-19;9!UBERON:0004921;7.89e-17;33!UBERON:0001555;4.84e-15;54!UBERON:0002367;8.16e-12;11!UBERON:0010147;8.16e-12;11!UBERON:0001007;8.86e-11;81!UBERON:0003937;9.05e-11;12!UBERON:0005399;9.05e-11;12!UBERON:0001758;1.97e-09;6!UBERON:0003672;1.97e-09;6!UBERON:0003129;4.30e-08;7!UBERON:0011137;8.17e-08;11!UBERON:0010323;8.17e-08;11!UBERON:0000077;1.33e-07;27!UBERON:0003101;2.42e-07;22!UBERON:0000079;2.42e-07;22!UBERON:0004119;4.72e-07;158!UBERON:0002108;4.74e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.79e-32,145;UBERON:0001555,4.79e-32,145;UBERON:0007026,4.79e-32,145;UBERON:0004119,3.81e-28,160;UBERON:0000925,3.81e-28,160;UBERON:0006595,3.81e-28,160;UBERON:0000160,4.69e-27,17;UBERON:0004921,1.42e-21,118;UBERON:0005409,3.84e-21,25;UBERON:0000059,2.04e-20,11;UBERON:0001155,1.88e-19,9;UBERON:0001046,7.76e-18,19;UBERON:0000162,4.91e-16,14;UBERON:0001353,4.91e-16,14;UBERON:0000163,4.91e-16,14;UBERON:0006866,4.91e-16,14;UBERON:0000164,4.91e-16,14;UBERON:0000931,4.91e-16,14;UBERON:0004122,7.17e-15,15;UBERON:0011216,7.47e-14,223;UBERON:0000161,3.27e-12,36;UBERON:0002367,6.06e-12,11;UBERON:0010147,6.06e-12,11;UBERON:0009846,6.06e-12,11;UBERON:0003353,6.06e-12,11;UBERON:0004902,6.06e-12,11;UBERON:0003820,6.06e-12,11;UBERON:0009847,6.06e-12,11;UBERON:0003937,6.91e-11,12;UBERON:0005399,6.91e-11,12;UBERON:0001758,2.27e-09,6;UBERON:0003672,2.27e-09,6;UBERON:0003064,3.57e-09,28;UBERON:0003929,1.43e-08,54;UBERON:0003129,4.86e-08,7;UBERON:0010323,8.99e-08,11;UBERON:0005911,1.36e-07,82;UBERON:0003102,2.02e-07,99;UBERON:0003101,2.04e-07,22;UBERON:0000079,2.04e-07,22;UBERON:0005157,3.46e-07,47;UBERON:0002108,4.76e-07,4;UBERON:0000077,5.12e-07,29 | |||
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| ||
|short_description=p2@LOC400550 | |short_description=p2@LOC400550 | ||
}} | }} |
Latest revision as of 06:41, 18 September 2015
Short description: | p2@LOC400550 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC400550_5end |
Coexpression cluster: | NA |
Association with transcript: | -186bp_to_ENST00000501311, NR_033925, NR_036444, uc002fjk.1_5end |
EntrezGene: | LOC400550 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 5.72e-12 | 3 |
enteric smooth muscle cell | 2.04e-11 | 3 |
smooth muscle cell of large intestine | 2.04e-11 | 3 |
smooth muscle cell of colon | 2.04e-11 | 3 |
fibroblast of periodontium | 2.27e-09 | 6 |
smooth muscle cell of prostate | 1.29e-08 | 2 |
hepatic stem cell | 3.12e-08 | 2 |
hepatic mesenchymal stem cell | 3.12e-08 | 2 |
fibroblast of gingiva | 6.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.12e-08 | 2 |