FFCP PHASE1:Hg19::chr16:85833109..85833158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10328 | |EntrezGene=10328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7864 | |HGNC=7864 | ||
|TSSclassifier=strong | |||
|UniProt=O43402,C9JB21,Q53Y03 | |UniProt=O43402,C9JB21,Q53Y03 | ||
|association_with_transcript=0bp_to_ENST00000253457,ENST00000435200,NM_001142288,NM_006067,uc002fjd.2,uc010vol.1_5end | |association_with_transcript=0bp_to_ENST00000253457,ENST00000435200,NM_001142288,NM_006067,uc002fjd.2,uc010vol.1_5end | ||
|cluster_id=chr16:85833109..85833158,- | |||
|description=CAGE_peak_1_at_COX4NB_5end | |description=CAGE_peak_1_at_COX4NB_5end | ||
|id=chr16:85833109..85833158,- | |id=chr16:85833109..85833158,- | ||
|ontology_enrichment_celltype=CL:0000066!1.58e-27!254;CL:0002321!2.77e-24!248;CL:0000220!5.56e-24!246;CL:0000548!4.70e-18!679;CL:0000004!4.70e-18!679;CL:0000255!4.70e-18!679;CL:0000012!3.03e-17!682;CL:0000222!5.20e-16!119;CL:0002078!1.65e-12!44;CL:0000076!3.38e-12!62;CL:0000213!5.22e-12!57;CL:0000215!5.22e-12!57;CL:0000115!1.37e-10!35;CL:0000055!1.76e-10!180;CL:0000144!3.75e-10!625;CL:0000071!4.76e-09!18;CL:0002546!4.76e-09!18;CL:0002139!7.08e-09!24;CL:0002371!1.37e-07!591;CL:0000003!1.55e-07!722;CL:1000449!1.93e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.58e-27!254;CL:0002321!2.77e-24!248;CL:0000220!5.56e-24!246;CL:0000548!4.70e-18!679;CL:0000004!4.70e-18!679;CL:0000255!4.70e-18!679;CL:0000012!3.03e-17!682;CL:0000222!5.20e-16!119;CL:0002078!1.65e-12!44;CL:0000076!3.38e-12!62;CL:0000213!5.22e-12!57;CL:0000215!5.22e-12!57;CL:0000115!1.37e-10!35;CL:0000055!1.76e-10!180;CL:0000144!3.75e-10!625;CL:0000071!4.76e-09!18;CL:0002546!4.76e-09!18;CL:0002139!7.08e-09!24;CL:0002371!1.37e-07!591;CL:0000003!1.55e-07!722;CL:1000449!1.93e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.79e-09;36!CL:0000071;4.55e-09;18!CL:0002139;6.41e-09;24!CL:0002078;1.03e-08;45!CL:1000449;8.26e-08;15!CL:0000213;2.62e-07;58!CL:0000215;2.62e-07;58!CL:0002681;6.82e-07;12!CL:0002584;6.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.30e-27,253;CL:0002321,1.32e-24,250;CL:0000222,2.92e-16,121;CL:0002078,6.31e-13,45;CL:0000213,2.10e-12,58;CL:0000215,2.10e-12,58;CL:0000076,6.16e-12,63;CL:0000115,5.27e-11,36;CL:0000071,4.76e-09,18;CL:0002546,4.76e-09,18;CL:0002139,7.08e-09,24;CL:1000449,7.37e-08,15;CL:0002681,6.40e-07,12;CL:0002584,6.40e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;4.55e-09;18 | |||
|ontology_enrichment_disease=DOID:162!1.60e-08!235;DOID:14566!2.93e-08!239 | |ontology_enrichment_disease=DOID:162!1.60e-08!235;DOID:14566!2.93e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.60e-08,235;DOID:14566,2.93e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.05e-11!118;UBERON:0000490!1.37e-10!138;UBERON:0002049!2.30e-10!79;UBERON:0007798!2.30e-10!79;UBERON:0002100!2.44e-10!216;UBERON:0000119!1.49e-09!312;UBERON:0000055!2.62e-09!69;UBERON:0006914!2.82e-09!25;UBERON:0000487!3.52e-09!22;UBERON:0000483!3.94e-09!309;UBERON:0001986!4.76e-09!18;UBERON:0004638!4.76e-09!18;UBERON:0004852!4.76e-09!18;UBERON:0003104!6.89e-09!238;UBERON:0009142!6.89e-09!238;UBERON:0005256!2.14e-08!143;UBERON:0001981!3.54e-08!60;UBERON:0007500!3.54e-08!60;UBERON:0004537!3.54e-08!60;UBERON:0006965!3.54e-08!60;UBERON:0004872!3.77e-08!84;UBERON:0004211!1.93e-07!16;UBERON:0001285!1.93e-07!16;UBERON:0007684!1.93e-07!16;UBERON:0003220!1.93e-07!16;UBERON:0004208!1.93e-07!16;UBERON:0000353!3.56e-07!17;UBERON:0000486!5.42e-07!82;UBERON:0006555!9.43e-07!17;UBERON:0005103!9.43e-07!17;UBERON:0000083!9.43e-07!17;UBERON:0009201!9.43e-07!17;UBERON:0004819!9.43e-07!17;UBERON:0006553!9.43e-07!17;UBERON:0003074!9.43e-07!17;UBERON:0003060!9.43e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.32e-09;25!UBERON:0000487;3.25e-09;22!UBERON:0004638;4.55e-09;18!UBERON:0001986;4.55e-09;18!UBERON:0004852;4.55e-09;18!UBERON:0000490;1.35e-08;33!UBERON:0006555;8.26e-08;15!UBERON:0004819;8.26e-08;15!UBERON:0001285;8.26e-08;15!UBERON:0007684;8.26e-08;15!UBERON:0003914;1.02e-07;74!UBERON:0000353;3.09e-07;15!UBERON:0001225;6.82e-07;12!UBERON:0008987;6.82e-07;12!UBERON:0001851;6.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.23e-12,148;UBERON:0002100,3.13e-11,199;UBERON:0003914,4.98e-11,117;UBERON:0002049,4.20e-10,78;UBERON:0007798,4.20e-10,78;UBERON:0000119,2.12e-09,309;UBERON:0006914,2.82e-09,25;UBERON:0003104,3.27e-09,160;UBERON:0009142,3.27e-09,160;UBERON:0000487,3.52e-09,22;UBERON:0004638,4.76e-09,18;UBERON:0001986,4.76e-09,18;UBERON:0004852,4.76e-09,18;UBERON:0000055,4.77e-09,68;UBERON:0000483,5.57e-09,306;UBERON:0007503,2.49e-08,78;UBERON:0007500,6.38e-08,59;UBERON:0001981,6.38e-08,59;UBERON:0004537,6.38e-08,59;UBERON:0006965,6.38e-08,59;UBERON:0004872,6.48e-08,83;UBERON:0004211,7.37e-08,15;UBERON:0009773,7.37e-08,15;UBERON:0001231,7.37e-08,15;UBERON:0001285,7.37e-08,15;UBERON:0007684,7.37e-08,15;UBERON:0004208,7.37e-08,15;UBERON:0006554,2.36e-07,47;UBERON:0000353,2.86e-07,15;UBERON:0005256,3.29e-07,122;UBERON:0006555,4.22e-07,16;UBERON:0004819,4.22e-07,16;UBERON:0001225,6.40e-07,12;UBERON:0008987,6.40e-07,12;UBERON:0000486,6.43e-07,83;UBERON:0001851,7.08e-07,15;UBERON:0001008,9.27e-07,48 | |||
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| ||
|short_description=p1@COX4NB | |short_description=p1@COX4NB | ||
}} | }} |
Latest revision as of 06:00, 18 September 2015
Short description: | p1@COX4NB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COX4NB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000253457, ENST00000435200, NM_001142288, NM_006067, uc002fjd.2, uc010vol.1_5end |
EntrezGene: | COX4NB |
HGNC: | 7864 |
UniProt: | O43402C9JB21Q53Y03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.30e-27 | 253 |
embryonic cell | 1.32e-24 | 250 |
mesodermal cell | 2.92e-16 | 121 |
meso-epithelial cell | 6.31e-13 | 45 |
lining cell | 2.10e-12 | 58 |
barrier cell | 2.10e-12 | 58 |
squamous epithelial cell | 6.16e-12 | 63 |
endothelial cell | 5.27e-11 | 36 |
blood vessel endothelial cell | 4.76e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.76e-09 | 18 |
endothelial cell of vascular tree | 7.08e-09 | 24 |
epithelial cell of nephron | 7.37e-08 | 15 |
kidney cortical cell | 6.40e-07 | 12 |
renal cortical epithelial cell | 6.40e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.60e-08 | 235 |
disease of cellular proliferation | 2.93e-08 | 239 |