FFCP PHASE1:Hg19::chr4:5894777..5894799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1400 | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |HGNC=2365 | ||
|TSSclassifier=strong | |||
|UniProt=A0EJG6,B3KT07,Q96I11 | |UniProt=A0EJG6,B3KT07,Q96I11 | ||
|association_with_transcript=0bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | |association_with_transcript=0bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | ||
|cluster_id=chr4:5894777..5894799,- | |||
|description=CAGE_peak_3_at_CRMP1_5end | |description=CAGE_peak_3_at_CRMP1_5end | ||
|id=chr4:5894777..5894799,- | |id=chr4:5894777..5894799,- | ||
|ontology_enrichment_celltype=CL:0000047!4.50e-13!8;CL:0002319!1.16e-11!25;CL:0000540!2.72e-10!6;CL:0000031!2.72e-10!6;CL:0000404!2.72e-10!6;CL:0000133!1.07e-08!59;CL:0002322!1.65e-07!5 | |ontology_enrichment_celltype=CL:0000047!4.50e-13!8;CL:0002319!1.16e-11!25;CL:0000540!2.72e-10!6;CL:0000031!2.72e-10!6;CL:0000404!2.72e-10!6;CL:0000133!1.07e-08!59;CL:0002322!1.65e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.79e-14;6!CL:0000404;2.79e-14;6!CL:0002319;7.52e-09;25!CL:0002322;4.62e-07;5!CL:0002321;8.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.16e-18,8;CL:0000540,3.37e-14,6;CL:0000031,3.37e-14,6;CL:0000404,3.37e-14,6;CL:0002319,8.13e-09,25;CL:0002322,4.74e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-17;82!CL:0000031;2.79e-14;6!UBERON:0006215;2.81e-08;3!UBERON:0003056;1.18e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.79e-07!10 | |ontology_enrichment_disease=DOID:171!2.79e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.59e-79!94;UBERON:0001016!5.59e-79!94;UBERON:0001017!6.76e-78!82;UBERON:0005743!7.97e-76!86;UBERON:0001049!1.64e-67!57;UBERON:0005068!1.64e-67!57;UBERON:0006241!1.64e-67!57;UBERON:0007135!1.64e-67!57;UBERON:0000955!2.49e-59!69;UBERON:0006238!2.49e-59!69;UBERON:0002616!8.48e-57!59;UBERON:0002780!5.85e-54!41;UBERON:0001890!5.85e-54!41;UBERON:0006240!5.85e-54!41;UBERON:0003080!2.23e-52!42;UBERON:0002346!3.24e-51!90;UBERON:0003075!1.53e-48!86;UBERON:0007284!1.53e-48!86;UBERON:0000924!1.46e-44!173;UBERON:0006601!1.46e-44!173;UBERON:0001869!2.29e-44!32;UBERON:0001893!5.86e-44!34;UBERON:0002020!8.40e-44!34;UBERON:0003528!8.40e-44!34;UBERON:0002791!2.12e-42!33;UBERON:0004121!4.67e-42!169;UBERON:0003056!3.80e-38!61;UBERON:0000956!3.14e-35!25;UBERON:0000203!3.14e-35!25;UBERON:0002619!5.43e-35!22;UBERON:0007023!3.37e-32!115;UBERON:0001950!4.19e-32!20;UBERON:0000033!8.93e-31!123;UBERON:0000153!1.33e-29!129;UBERON:0007811!1.33e-29!129;UBERON:0003076!1.23e-15!15;UBERON:0003057!1.23e-15!15;UBERON:0000025!3.76e-14!194;UBERON:0004732!3.48e-13!13;UBERON:0001871!4.96e-13!7;UBERON:0004733!4.91e-12!12;UBERON:0002028!4.91e-12!12;UBERON:0007277!4.91e-12!12;UBERON:0001894!3.29e-11!7;UBERON:0006222!3.29e-11!7;UBERON:0002420!1.95e-10!9;UBERON:0007245!1.95e-10!9;UBERON:0010009!1.95e-10!9;UBERON:0010011!1.95e-10!9;UBERON:0000454!1.95e-10!9;UBERON:0000200!4.64e-10!6;UBERON:0002308!4.88e-10!9;UBERON:0000125!4.88e-10!9;UBERON:0000922!1.23e-09!612;UBERON:0004111!2.54e-09!241;UBERON:0000483!3.50e-09!309;UBERON:0001872!5.07e-09!5;UBERON:0002021!5.60e-09!5;UBERON:0000349!6.08e-09!5;UBERON:0000119!6.36e-09!312;UBERON:0000064!1.10e-08!219;UBERON:0002680!1.91e-08!9;UBERON:0001895!1.91e-08!9;UBERON:0010092!1.91e-08!9;UBERON:0000475!8.79e-08!365;UBERON:0009663!1.44e-07!7;UBERON:0003296!2.65e-07!4;UBERON:0010133!2.65e-07!4;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0000477!3.53e-07!286;UBERON:0002050!3.76e-07!605;UBERON:0005423!3.76e-07!605;UBERON:0000468!7.88e-07!659;UBERON:0000369!8.24e-07!4;UBERON:0002435!8.24e-07!4;UBERON:0000204!8.24e-07!4;UBERON:0010082!8.24e-07!4;UBERON:0002298!8.83e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!5.59e-79!94;UBERON:0001016!5.59e-79!94;UBERON:0001017!6.76e-78!82;UBERON:0005743!7.97e-76!86;UBERON:0001049!1.64e-67!57;UBERON:0005068!1.64e-67!57;UBERON:0006241!1.64e-67!57;UBERON:0007135!1.64e-67!57;UBERON:0000955!2.49e-59!69;UBERON:0006238!2.49e-59!69;UBERON:0002616!8.48e-57!59;UBERON:0002780!5.85e-54!41;UBERON:0001890!5.85e-54!41;UBERON:0006240!5.85e-54!41;UBERON:0003080!2.23e-52!42;UBERON:0002346!3.24e-51!90;UBERON:0003075!1.53e-48!86;UBERON:0007284!1.53e-48!86;UBERON:0000924!1.46e-44!173;UBERON:0006601!1.46e-44!173;UBERON:0001869!2.29e-44!32;UBERON:0001893!5.86e-44!34;UBERON:0002020!8.40e-44!34;UBERON:0003528!8.40e-44!34;UBERON:0002791!2.12e-42!33;UBERON:0004121!4.67e-42!169;UBERON:0003056!3.80e-38!61;UBERON:0000956!3.14e-35!25;UBERON:0000203!3.14e-35!25;UBERON:0002619!5.43e-35!22;UBERON:0007023!3.37e-32!115;UBERON:0001950!4.19e-32!20;UBERON:0000033!8.93e-31!123;UBERON:0000153!1.33e-29!129;UBERON:0007811!1.33e-29!129;UBERON:0003076!1.23e-15!15;UBERON:0003057!1.23e-15!15;UBERON:0000025!3.76e-14!194;UBERON:0004732!3.48e-13!13;UBERON:0001871!4.96e-13!7;UBERON:0004733!4.91e-12!12;UBERON:0002028!4.91e-12!12;UBERON:0007277!4.91e-12!12;UBERON:0001894!3.29e-11!7;UBERON:0006222!3.29e-11!7;UBERON:0002420!1.95e-10!9;UBERON:0007245!1.95e-10!9;UBERON:0010009!1.95e-10!9;UBERON:0010011!1.95e-10!9;UBERON:0000454!1.95e-10!9;UBERON:0000200!4.64e-10!6;UBERON:0002308!4.88e-10!9;UBERON:0000125!4.88e-10!9;UBERON:0000922!1.23e-09!612;UBERON:0004111!2.54e-09!241;UBERON:0000483!3.50e-09!309;UBERON:0001872!5.07e-09!5;UBERON:0002021!5.60e-09!5;UBERON:0000349!6.08e-09!5;UBERON:0000119!6.36e-09!312;UBERON:0000064!1.10e-08!219;UBERON:0002680!1.91e-08!9;UBERON:0001895!1.91e-08!9;UBERON:0010092!1.91e-08!9;UBERON:0000475!8.79e-08!365;UBERON:0009663!1.44e-07!7;UBERON:0003296!2.65e-07!4;UBERON:0010133!2.65e-07!4;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0000477!3.53e-07!286;UBERON:0002050!3.76e-07!605;UBERON:0005423!3.76e-07!605;UBERON:0000468!7.88e-07!659;UBERON:0000369!8.24e-07!4;UBERON:0002435!8.24e-07!4;UBERON:0000204!8.24e-07!4;UBERON:0010082!8.24e-07!4;UBERON:0002298!8.83e-07!8 | ||
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| ||
|short_description=p3@CRMP1 | |short_description=p3@CRMP1 | ||
}} | }} |
Latest revision as of 04:03, 18 September 2015
Short description: | p3@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324989, NM_001014809, uc003gis.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | A0EJG6B3KT07Q96I11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.16e-18 | 8 |
neuron | 3.37e-14 | 6 |
neuroblast | 3.37e-14 | 6 |
electrically signaling cell | 3.37e-14 | 6 |
neural cell | 8.13e-09 | 25 |
embryonic stem cell | 4.74e-07 | 5 |