FFCP PHASE1:Hg19::chr7:27183263..27183284,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27183263..27183284,- to FFCP PHASE1:Hg19::chr7:27183263..27183284,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3202 | |EntrezGene=3202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5106 | |HGNC=5106 | ||
|TSSclassifier=strong | |||
|UniProt=P20719 | |UniProt=P20719 | ||
|association_with_transcript=2bp_to_ENST00000222726,NM_019102,uc003syn.1_5end | |||
|cluster_id=chr7:27183263..27183284,- | |||
|coexpression_cluster_id=C4680 | |||
|description=CAGE_peak_2_at_HOXA5_5end | |||
|id=chr7:27183263..27183284,- | |||
|ontology_enrichment_celltype=CL:1000497!1.34e-11!18;CL:0002518!1.34e-11!18;CL:1000449!1.39e-10!16;CL:1000507!4.68e-09!12;CL:1000494!4.68e-09!12;CL:0002681!1.09e-08!13;CL:0002584!1.09e-08!13;CL:0000222!4.38e-08!119;CL:0002334!2.15e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.79e-14;17!CL:0002518;1.79e-14;17!CL:1000449;4.44e-13;15!CL:1000507;3.93e-11;10!CL:1000494;3.93e-11;10!CL:0002681;3.16e-10;12!CL:0002584;3.16e-10;12!CL:0002334;4.23e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.13e-14,17;CL:0002518,3.13e-14,17;CL:1000449,1.07e-12,15;CL:1000507,6.00e-11,10;CL:1000494,6.00e-11,10;CL:0002681,7.04e-10,12;CL:0002584,7.04e-10,12;CL:0002334,3.61e-09,12;CL:0000222,4.68e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!4.84e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.65e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0009569!2.90e-18!113;UBERON:0000489!4.31e-14!32;UBERON:0002100!3.85e-13!216;UBERON:0001008!8.90e-13!45;UBERON:0006554!1.40e-12!44;UBERON:0002417!2.05e-12!61;UBERON:0000916!2.05e-12!61;UBERON:0002113!2.26e-12!27;UBERON:0003918!2.26e-12!27;UBERON:0005095!2.26e-12!27;UBERON:0007687!2.26e-12!27;UBERON:0003887!5.18e-12!21;UBERON:0000080!1.30e-11!18;UBERON:0002120!1.30e-11!18;UBERON:0004875!1.30e-11!18;UBERON:0005721!1.30e-11!18;UBERON:0005754!1.30e-11!18;UBERON:0007297!1.30e-11!18;UBERON:0005177!1.33e-11!107;UBERON:0003914!1.44e-11!118;UBERON:0006555!2.60e-11!17;UBERON:0005103!2.60e-11!17;UBERON:0000083!2.60e-11!17;UBERON:0009201!2.60e-11!17;UBERON:0004819!2.60e-11!17;UBERON:0006553!2.60e-11!17;UBERON:0003074!2.60e-11!17;UBERON:0003060!2.60e-11!17;UBERON:0004876!6.16e-11!20;UBERON:0000926!1.03e-10!448;UBERON:0004120!1.03e-10!448;UBERON:0006603!1.03e-10!448;UBERON:0004211!1.39e-10!16;UBERON:0001285!1.39e-10!16;UBERON:0007684!1.39e-10!16;UBERON:0003220!1.39e-10!16;UBERON:0004208!1.39e-10!16;UBERON:0000464!5.27e-10!104;UBERON:0003886!5.47e-10!63;UBERON:0000466!5.72e-10!126;UBERON:0005172!1.68e-09!55;UBERON:0005173!1.68e-09!55;UBERON:0003103!2.10e-09!69;UBERON:0009773!4.68e-09!12;UBERON:0001231!4.68e-09!12;UBERON:0004810!4.68e-09!12;UBERON:0001225!1.09e-08!13;UBERON:0008987!1.09e-08!13;UBERON:0000058!4.89e-08!26;UBERON:0000353!5.84e-08!17;UBERON:0002553!6.71e-08!70;UBERON:0003064!7.21e-08!37;UBERON:0000915!8.40e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.25e-17;30!UBERON:0001008;1.25e-17;30!UBERON:0000489;3.76e-17;29!UBERON:0002113;2.73e-15;24!UBERON:0011143;2.73e-15;24!UBERON:0006555;4.44e-13;15!UBERON:0004819;4.44e-13;15!UBERON:0001285;4.44e-13;15!UBERON:0007684;4.44e-13;15!UBERON:0004211;3.93e-11;10!UBERON:0009773;3.93e-11;10!UBERON:0001231;3.93e-11;10!UBERON:0004810;3.93e-11;10!UBERON:0000353;6.64e-11;15!UBERON:0001225;3.16e-10;12!UBERON:0008987;3.16e-10;12!UBERON:0001851;1.46e-07;15!UBERON:0003688;2.27e-07;6!UBERON:0002358;2.27e-07;6!UBERON:0003684;2.27e-07;6!UBERON:0001178;2.27e-07;6!UBERON:0002417;3.06e-07;58!UBERON:0000916;3.06e-07;58!UBERON:0011135;9.48e-07;5!UBERON:0002216;9.48e-07;5!UBERON:0011134;9.48e-07;5!UBERON:0002209;9.48e-07;5!UBERON:0002213;9.48e-07;5!UBERON:0007844;9.48e-07;5!UBERON:0011138;9.48e-07;5!UBERON:0001130;9.48e-07;5!UBERON:0001066;9.48e-07;5!UBERON:0001468;9.48e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.46e-20,112;UBERON:0000489,1.46e-18,31;UBERON:0002113,1.23e-16,26;UBERON:0003918,1.23e-16,26;UBERON:0011143,1.23e-16,26;UBERON:0005095,1.23e-16,26;UBERON:0007687,1.23e-16,26;UBERON:0006555,8.92e-14,16;UBERON:0004819,8.92e-14,16;UBERON:0002100,1.92e-13,199;UBERON:0006554,9.55e-13,47;UBERON:0004211,1.07e-12,15;UBERON:0009773,1.07e-12,15;UBERON:0001231,1.07e-12,15;UBERON:0001285,1.07e-12,15;UBERON:0007684,1.07e-12,15;UBERON:0004208,1.07e-12,15;UBERON:0002417,1.35e-12,60;UBERON:0000916,1.35e-12,60;UBERON:0001008,2.72e-12,48;UBERON:0005177,5.20e-11,101;UBERON:0004810,6.00e-11,10;UBERON:0000353,1.33e-10,15;UBERON:0001225,7.04e-10,12;UBERON:0008987,7.04e-10,12;UBERON:0003103,8.02e-10,68;UBERON:0005172,8.08e-09,54;UBERON:0005173,8.08e-09,54;UBERON:0003914,1.76e-08,117;UBERON:0000915,2.07e-08,52;UBERON:0003104,4.54e-08,160;UBERON:0009142,4.54e-08,160;UBERON:0001851,2.65e-07,15;UBERON:0000080,3.11e-07,9;UBERON:0002120,3.11e-07,9;UBERON:0004875,3.11e-07,9;UBERON:0005721,3.11e-07,9;UBERON:0005754,3.11e-07,9;UBERON:0007297,3.11e-07,9;UBERON:0003688,3.80e-07,6;UBERON:0002358,3.80e-07,6;UBERON:0003684,3.80e-07,6;UBERON:0001178,3.80e-07,6;UBERON:0004876,7.02e-07,11;UBERON:0005103,9.57e-07,8;UBERON:0000083,9.57e-07,8;UBERON:0009201,9.57e-07,8;UBERON:0006553,9.57e-07,8;UBERON:0003074,9.57e-07,8;UBERON:0003060,9.57e-07,8 | |||
|phase1_expression=1.63510541343501,1.92690471501885,10.5715803071978,1.0007329835313,6.70441641640932,0.872338524100369,0,1.26343974685366,0.783556884599516,13.2696325710815,0.697801167972428,0,0,5.44571953024205,6.2965501388304,4.70627602516243,3.61616716814386,4.38186054232424,3.41552959153355,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.464858073811369,0.822335776043652,0.619412741790207,0.863077176966451,0.768482119587302,0,2.75796544589295,3.87290810150296,0,0.564727018627814,0.818718450173537,0.449446968890169,0.918251677112708,1.28371610830437,0,0,0,0,1.7412554317715,1.13477044938228,0.622822248995575,0.502497330513487,0,0.217188844705117,3.02699751316684,1.84138817993782,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,3.20898734969396,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0,1.69592382577203,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0,1.20848795132744,1.52054421143703,0.488124115096339,0.735326160691737,2.43042584364528,4.19708722935175,1.34717623575702,3.60356737546631,3.06633274931766,2.84779697870439,2.19842092716489,0,7.75560528296651,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,2.15585442544872,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,5.16708818237254,2.80483547606892,0.8231480226628,4.41026134156626,0,0,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0.433099343283221,1.85194205030644,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0,0,0,0,1.70161193135412,2.3250715081117,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,1.04007436911366,3.08648849114571,0,3.46348832720929,0.428933980974443,0,0,0,0,0,8.741741934728,21.7883364650074,15.3958406420368,0,0,0,0,0,0,1.01346914667305,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,3.31267027641678,5.00170521059677,8.13795071099207,0,0,0,0,0.902838299183157,0,1.03473071292505,0.664225598535437,0.737476674166813,0,0,0,0,0,0.106727557803444,0,0,0,1.48864684691266,1.84154367945675,0.561320188866147,10.7636885374789,2.04682899626681,8.36440389946759,10.3892646511494,1.54209693802656,3.01854933032316,1.8067974323038,5.71179872101983,1.16210378459959,0.120859449591622,0.601519410909855,0.368323955743585,0,1.27463817604702,0,2.25599806453706,6.00719629414435,2.35304930753057,4.38417673959782,12.0328856937878,1.13733384070897,3.06168669497728,4.31831832204279,3.08454505380579,7.04460737614017,9.53210570324221,2.03901018436031,4.15538004464362,3.35812132083267,0,0,0,0,0,7.83111688522689,0.732555718546747,0.495056999523528,0.574265537996172,0.650060246036521,0,0.676695028044854,3.85121542786611,3.22357716924872,0.137836572484531,0,0,2.55679882248303,0.445160178233687,0,0,0,0,3.71876439437829,1.5740617341532,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,1.71567174531442,4.35026245229268,8.13084077264449,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,28.5144782868603,23.2430322864862,0,0.141405431953713,6.78048699721457,15.4382296192915,0,0,9.260408548267,15.0855792970726,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,5.93105944893709,1.29151611801369,3.36942951335251,2.66058092122005,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,4.54470716384378,2.80797178113459,0,0,0,0,0,0,0.425846237690326,3.09154810280188,0.614481528616916,0.447352215784832,1.00109485027145,0,0,0,0,0,0,0,0.879049075631364,0,0,9.09235669780522,0,0.296964680832639,0,0,0,0,0,0,1.39473591775749,0.552567831062295,1.0077309914171,0.818149460017238,0,0,0,0,0,1.479651084554,0,0,0,0,0,0.260427761085233,0,3.62499787717397,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.435753854075961,0,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,21.7099634851666,0,0,0,2.4768118060935,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,6.31335044559025,4.83962864194656,0.30607276163049,0,3.15679180770434,12.8573357332586,0,1.65495977937749,0.313932918407225,0,0.569219092059585,0,3.47119476670262,2.35181753794506,2.00236175134926,7.33852006616527,1.37588825977293,0.0967563312890851,0.292357268344742,0.328461828212837,3.68558262655994,0,0,0,0,0,0,0,0.85381197895741,0.19980960958213,0.72045208577053,26.5724903104924,5.66263492944483,0,0,3.53541051925193,0.135904206073614,0,0.101998217636322,16.4701836243866,0,0,0,0.4297654414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| ||
|short_description=p2@HOXA5 | |||
}} | }} |
Latest revision as of 01:30, 18 September 2015
Short description: | p2@HOXA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXA5_5end |
Coexpression cluster: | C4680_Smooth_clear_gastric_Mesothelial_glioma_rectum_melanoma |
Association with transcript: | 2bp_to_ENST00000222726, NM_019102, uc003syn.1_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.13e-14 | 17 |
kidney epithelial cell | 3.13e-14 | 17 |
epithelial cell of nephron | 1.07e-12 | 15 |
kidney tubule cell | 6.00e-11 | 10 |
nephron tubule epithelial cell | 6.00e-11 | 10 |
kidney cortical cell | 7.04e-10 | 12 |
renal cortical epithelial cell | 7.04e-10 | 12 |
preadipocyte | 3.61e-09 | 12 |
mesodermal cell | 4.68e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.65e-07 | 14 |