FFCP PHASE1:Hg19::chr2:64681219..64681231,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:64681219..64681231,+ to FFCP PHASE1:Hg19::chr2:64681219..64681231,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29094 | |EntrezGene=29094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |HGNC=25012 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCW2 | |UniProt=Q3ZCW2 | ||
|association_with_transcript=-95bp_to_NM_014181,uc002scy.3_5end | |||
|cluster_id=chr2:64681219..64681231,+ | |||
|description=CAGE_peak_7_at_LGALSL_5end | |||
|id=chr2:64681219..64681231,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.57e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.17e-26;5!CL:0002537;7.45e-10;5!CL:0002321;1.50e-08;15!CL:1000746;2.43e-07;7!CL:1000612;2.43e-07;7!CL:0002681;3.65e-07;12!CL:0002584;3.65e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.27e-26,5;CL:0002537,4.67e-10,5;CL:1000746,2.75e-07,7;CL:1000612,2.75e-07,7;CL:0002681,5.09e-07,12;CL:0002584,5.09e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.14e-08;3!UBERON:0006298;6.37e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.70e-14!106;DOID:0050687!6.12e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.37e-07;1!DOID:1357;6.37e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.90e-07,1;DOID:1357,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.33e-10!129;UBERON:0004185!6.33e-10!129;UBERON:0001007!2.64e-09!155;UBERON:0001555!2.64e-09!155;UBERON:0007026!2.64e-09!155;UBERON:0000481!1.25e-08!347;UBERON:0004119!3.75e-08!169;UBERON:0000925!3.75e-08!169;UBERON:0006595!3.75e-08!169;UBERON:0000077!5.11e-08!130;UBERON:0000922!6.46e-08!612;UBERON:0000466!2.01e-07!126;UBERON:0000468!4.15e-07!659;UBERON:0000062!5.70e-07!511;UBERON:0000464!7.62e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.65e-11;2!UBERON:0000966;7.45e-10;5!UBERON:0005388;7.45e-10;5!UBERON:0001802;7.45e-10;5!UBERON:0001851;1.56e-08;15!UBERON:0000074;2.43e-07;7!UBERON:0001229;2.43e-07;7!UBERON:0001225;3.65e-07;12!UBERON:0008987;3.65e-07;12!UBERON:0000305;3.66e-07;7!UBERON:0001736;6.37e-07;1!UBERON:0001764;6.37e-07;1!UBERON:0001825;6.37e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.41e-11,2;UBERON:0004871,8.71e-11,8;UBERON:0001851,2.27e-08,15;UBERON:0000966,2.60e-08,6;UBERON:0005388,2.60e-08,6;UBERON:0001802,2.60e-08,6;UBERON:0004876,7.57e-08,11;UBERON:0000305,2.64e-07,7;UBERON:0010532,2.75e-07,7;UBERON:0000074,2.75e-07,7;UBERON:0001229,2.75e-07,7;UBERON:0001230,2.75e-07,7;UBERON:0003220,2.75e-07,7;UBERON:0005749,2.75e-07,7;UBERON:0004199,2.75e-07,7;UBERON:0004209,2.75e-07,7;UBERON:0004198,2.75e-07,7;UBERON:0001225,5.09e-07,12;UBERON:0008987,5.09e-07,12;UBERON:0001764,5.90e-07,1;UBERON:0001825,5.90e-07,1;UBERON:0001736,6.23e-07,1;UBERON:0006298,6.23e-07,1;UBERON:0002171,9.67e-07,1;UBERON:0006518,9.67e-07,1;UBERON:0008949,9.67e-07,1;UBERON:0000101,9.67e-07,1;UBERON:0002167,9.67e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.410623275218653,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,3.17131635936948,1.19276791489337,1.39432731443422,1.24393266018445,1.26160425437814,1.09493207722749,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0.581267877027924,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0,0.276242966807689,0,0,0,0.451199612907412,0.385076685522074,0,0,0,1.13733384070897,0,0.431831832204279,0,0,2.00675909541941,1.01950509218015,0,0,0,0.261435451024901,0.512900250232778,0.328014645699706,1.30151357865721,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0.4046311234222,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.75894634753143,0.699869440489966,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.320472213382419,0,0.490080431962063,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,1.21360521749513,0,0,1.67121139316383,0.296964680832639,1.84296421259539,0,0.562677665642051,0.111308705022906,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0.306806047506464,0.123084805461069,0,0.0898683511473268,0.716084698702437,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.699679999969566,1.44999915086959,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0,0,0.442317039724898,0,0.219385397153973,0.10893846351899,0.278847488557207,0.230850775511391,0,0.69169171316418,0.448788222048861,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.424059214301822,0.432777279484182,0,0.796118080530053,0.611030144933625,0,0.123563938946503,0,0.404406797884062,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.522355239482415,0.52418000472609,0.51595809741485,0.290268993867255,0.292357268344742,0.492692742319255,0.484945082442097,0.441280633457501,2.03382666702479,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0.799238438328521,0,1.03082936549324,0.171594997861965,0,0,0.235694034616795,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0.669514372325618,0.470284307407084,0,1.16495949527454,0.630265458457789,0.988990300573997,1.01105315781277,0.295282444544246,0.254019996197353,0,0.136203406111576,0.964518890790115,1.51293380256957,0.83088067605837,0,0.77380195455795,0.0607495566580247,0,0.709251365692784,0.577000469484979,0.211200673038813,0.35857467866569,0.767660789277781,1.42939065274673,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0.453248366080503,0.293104467356165,0,0.129282956361551,0,1.19760786519031,0,0.427149650270779,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0.612691153526923,0,2.66991963625398,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0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| 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| ||
|short_description=p7@LGALSL | |||
}} | }} |
Latest revision as of 23:35, 17 September 2015
Short description: | p7@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | -95bp_to_NM_014181, uc002scy.3_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.27e-26 | 5 |
amnion mesenchymal stem cell | 4.67e-10 | 5 |
glomerular cell | 2.75e-07 | 7 |
kidney corpuscule cell | 2.75e-07 | 7 |
kidney cortical cell | 5.09e-07 | 12 |
renal cortical epithelial cell | 5.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.41e-11 | 2 |
somatic layer of lateral plate mesoderm | 8.71e-11 | 8 |
cortex | 2.27e-08 | 15 |
retina | 2.60e-08 | 6 |
photoreceptor array | 2.60e-08 | 6 |
posterior segment of eyeball | 2.60e-08 | 6 |
urogenital ridge | 7.57e-08 | 11 |
amnion | 2.64e-07 | 7 |
primitive nephron | 2.75e-07 | 7 |
renal glomerulus | 2.75e-07 | 7 |
renal corpuscle | 2.75e-07 | 7 |
glomerular capsule | 2.75e-07 | 7 |
metanephric mesenchyme | 2.75e-07 | 7 |
glomerular tuft | 2.75e-07 | 7 |
S-shaped body | 2.75e-07 | 7 |
renal vesicle | 2.75e-07 | 7 |
comma-shaped body | 2.75e-07 | 7 |
cortex of kidney | 5.09e-07 | 12 |
renal parenchyma | 5.09e-07 | 12 |
maxillary sinus | 5.90e-07 | 1 |
paranasal sinus | 5.90e-07 | 1 |
submandibular gland | 6.23e-07 | 1 |
submandibular gland primordium | 6.23e-07 | 1 |
lower lobe of right lung | 9.67e-07 | 1 |
right lung lobe | 9.67e-07 | 1 |
lower lobe of lung | 9.67e-07 | 1 |
lobe of lung | 9.67e-07 | 1 |
right lung | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.90e-07 | 1 |
maxillary sinus cancer | 5.90e-07 | 1 |