FFCP PHASE1:Hg19::chr6:29595998..29596020,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4070 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SUJ9,Q8IW08,Q9UBS5 | |||
|association_with_transcript=0bp_to_NM_021903,uc003nmp.3,uc003nms.3_5end | |||
|cluster_id=chr6:29595998..29596020,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GABBR1_5end | |||
|id=chr6:29595998..29596020,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.21e-23;82!UBERON:0006215;9.74e-14;3!UBERON:0010122;2.18e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-47!57;UBERON:0005068!1.49e-47!57;UBERON:0006241!1.49e-47!57;UBERON:0007135!1.49e-47!57;UBERON:0000073!5.39e-43!94;UBERON:0001016!5.39e-43!94;UBERON:0001017!5.72e-41!82;UBERON:0005743!1.84e-39!86;UBERON:0002780!4.51e-39!41;UBERON:0001890!4.51e-39!41;UBERON:0006240!4.51e-39!41;UBERON:0002616!5.29e-39!59;UBERON:0002346!2.86e-38!90;UBERON:0003080!8.62e-38!42;UBERON:0000955!1.62e-37!69;UBERON:0006238!1.62e-37!69;UBERON:0003075!7.83e-37!86;UBERON:0007284!7.83e-37!86;UBERON:0001893!6.13e-36!34;UBERON:0002020!6.50e-36!34;UBERON:0003528!6.50e-36!34;UBERON:0002791!8.50e-35!33;UBERON:0001869!9.31e-34!32;UBERON:0003056!4.34e-28!61;UBERON:0002619!3.09e-25!22;UBERON:0000956!4.43e-25!25;UBERON:0000203!4.43e-25!25;UBERON:0000924!7.39e-24!173;UBERON:0006601!7.39e-24!173;UBERON:0001950!7.68e-23!20;UBERON:0004121!1.50e-22!169;UBERON:0007023!1.01e-21!115;UBERON:0000033!1.47e-19!123;UBERON:0000153!9.61e-18!129;UBERON:0007811!9.61e-18!129;UBERON:0002420!1.48e-12!9;UBERON:0007245!1.48e-12!9;UBERON:0010009!1.48e-12!9;UBERON:0010011!1.48e-12!9;UBERON:0000454!1.48e-12!9;UBERON:0002308!2.65e-12!9;UBERON:0000125!2.65e-12!9;UBERON:0003076!9.60e-11!15;UBERON:0003057!9.60e-11!15;UBERON:0009663!3.70e-10!7;UBERON:0000200!1.42e-08!6;UBERON:0001871!3.06e-08!7;UBERON:0000025!3.75e-08!194;UBERON:0004733!7.13e-08!12;UBERON:0002028!7.13e-08!12;UBERON:0007277!7.13e-08!12;UBERON:0000349!1.13e-07!5;UBERON:0002298!1.34e-07!8;UBERON:0001872!2.00e-07!5;UBERON:0004732!4.54e-07!13;UBERON:0002021!4.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.45e-83;34!UBERON:0003528;6.14e-81;34!UBERON:0002020;6.14e-81;34!UBERON:0002791;1.47e-78;32!UBERON:0001869;1.49e-78;32!UBERON:0002780;1.34e-72;41!UBERON:0001890;1.34e-72;41!UBERON:0002619;2.93e-69;22!UBERON:0000073;1.56e-68;53!UBERON:0002616;1.56e-68;53!UBERON:0001950;3.36e-61;20!UBERON:0000956;1.07e-60;25!UBERON:0000203;1.07e-60;25!UBERON:0000955;7.43e-45;68!UBERON:0001017;2.21e-42;75!UBERON:0002420;1.35e-38;9!UBERON:0007245;1.35e-38;9!UBERON:0010009;1.35e-38;9!UBERON:0010011;1.35e-38;9!UBERON:0000454;1.35e-38;9!UBERON:0000125;7.25e-38;9!UBERON:0002308;7.25e-38;9!UBERON:0001016;9.11e-35;83!UBERON:0009663;1.49e-30;7!UBERON:0000200;4.67e-25;6!UBERON:0000349;4.21e-22;5!UBERON:0001872;3.80e-21;5!UBERON:0004733;9.57e-21;12!UBERON:0002028;9.57e-21;12!UBERON:0007023;1.17e-19;114!UBERON:0004732;4.71e-19;13!UBERON:0000369;6.25e-19;4!UBERON:0002435;6.25e-19;4!UBERON:0000204;6.25e-19;4!UBERON:0002298;1.90e-16;6!UBERON:0002680;3.50e-16;9!UBERON:0001895;3.50e-16;9!UBERON:0001871;3.21e-15;6!UBERON:0005383;1.09e-14;3!UBERON:0005382;1.09e-14;3!UBERON:0011216;6.67e-14;132!UBERON:0001870;1.26e-13;3!UBERON:0002021;1.34e-13;5!UBERON:0000988;1.37e-12;3!UBERON:0001873;2.18e-10;2!UBERON:0002784;2.84e-10;4!UBERON:0001894;3.91e-10;7!UBERON:0001897;4.98e-10;2!UBERON:0010225;4.98e-10;2!UBERON:0001875;6.92e-10;2!UBERON:0006514;6.92e-10;2!UBERON:0001954;8.07e-10;2!UBERON:0003022;8.07e-10;2!UBERON:0002421;8.07e-10;2!UBERON:0002600;8.07e-10;2!UBERON:0001876;8.99e-10;2!UBERON:0002702;8.99e-10;2!UBERON:0010314;1.25e-09;132!UBERON:0002771;1.61e-09;2!UBERON:0002148;4.72e-09;2!UBERON:0006331;4.72e-09;2!UBERON:0009662;4.72e-09;2!UBERON:0002037;4.45e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.01e-129,56;UBERON:0005068,2.01e-129,56;UBERON:0006241,2.01e-129,56;UBERON:0007135,2.01e-129,56;UBERON:0000073,2.34e-124,53;UBERON:0002616,2.34e-124,53;UBERON:0002780,3.09e-104,41;UBERON:0001890,3.09e-104,41;UBERON:0003080,3.09e-104,41;UBERON:0006240,3.09e-104,41;UBERON:0000955,3.98e-104,68;UBERON:0006238,3.98e-104,68;UBERON:0001017,1.15e-99,81;UBERON:0001893,1.30e-96,34;UBERON:0003528,1.55e-96,34;UBERON:0002020,1.55e-96,34;UBERON:0001869,2.59e-89,32;UBERON:0002791,4.41e-89,32;UBERON:0001016,4.67e-89,89;UBERON:0003075,3.54e-86,82;UBERON:0007284,3.54e-86,82;UBERON:0002346,8.14e-82,86;UBERON:0002619,1.82e-69,22;UBERON:0003056,3.84e-68,61;UBERON:0007023,5.01e-67,114;UBERON:0010371,2.69e-66,104;UBERON:0001950,1.92e-61,20;UBERON:0000956,7.00e-61,25;UBERON:0000203,7.00e-61,25;UBERON:0010314,2.49e-53,132;UBERON:0004121,6.72e-43,171;UBERON:0000924,6.72e-43,171;UBERON:0006601,6.72e-43,171;UBERON:0002420,1.11e-38,9;UBERON:0007245,1.11e-38,9;UBERON:0010009,1.11e-38,9;UBERON:0010011,1.11e-38,9;UBERON:0000454,1.11e-38,9;UBERON:0000125,8.09e-38,9;UBERON:0002308,8.09e-38,9;UBERON:0011216,1.43e-32,223;UBERON:0000025,4.79e-32,192;UBERON:0009663,1.53e-30,7;UBERON:0003076,2.94e-25,15;UBERON:0003057,2.94e-25,15;UBERON:0000200,3.41e-25,6;UBERON:0004111,6.94e-24,240;UBERON:0000349,3.70e-22,5;UBERON:0001872,2.55e-21,5;UBERON:0004733,1.36e-20,12;UBERON:0002028,1.36e-20,12;UBERON:0007277,1.36e-20,12;UBERON:0000369,6.12e-19,4;UBERON:0002435,6.12e-19,4;UBERON:0000204,6.12e-19,4;UBERON:0010082,6.12e-19,4;UBERON:0004732,6.50e-19,13;UBERON:0000483,8.14e-17,306;UBERON:0000119,1.45e-16,309;UBERON:0002298,2.11e-16,6;UBERON:0002680,4.48e-16,9;UBERON:0001895,4.48e-16,9;UBERON:0010092,4.48e-16,9;UBERON:0001871,2.49e-15,6;UBERON:0005383,1.09e-14,3;UBERON:0005382,1.09e-14,3;UBERON:0001870,1.32e-13,3;UBERON:0002021,1.46e-13,5;UBERON:0000988,1.32e-12,3;UBERON:0001873,2.19e-10,2;UBERON:0010122,2.19e-10,2;UBERON:0002784,3.08e-10,4;UBERON:0001894,4.01e-10,7;UBERON:0006222,4.01e-10,7;UBERON:0001897,5.56e-10,2;UBERON:0010225,5.56e-10,2;UBERON:0001875,6.35e-10,2;UBERON:0006514,6.35e-10,2;UBERON:0001876,7.24e-10,2;UBERON:0001954,9.00e-10,2;UBERON:0003022,9.00e-10,2;UBERON:0002421,9.00e-10,2;UBERON:0002600,9.00e-10,2;UBERON:0002702,9.40e-10,2;UBERON:0002771,1.51e-09,2;UBERON:0002148,5.13e-09,2;UBERON:0006331,5.13e-09,2;UBERON:0009662,5.13e-09,2;UBERON:0000923,1.76e-07,560;UBERON:0010316,1.76e-07,560;UBERON:0005291,1.76e-07,560;UBERON:0006598,1.76e-07,560;UBERON:0010317,1.76e-07,560;UBERON:0002532,1.76e-07,560;UBERON:0002050,2.32e-07,564;UBERON:0002037,5.48e-07,6;UBERON:0006215,5.48e-07,6;UBERON:0005423,7.28e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0,0.598390972864896,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.504867548488229,0.184099797284599,0.161646056818812,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0.414415513436035,0,0.500170521059677,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0.242721043499027,0,0,0,0.296964680832639,0,3.97659059106519,6.6114625712941,0.111308705022906,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,4.84666373047609,3.06134723934109,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,13.2861207872076,13.8685904419219,3.05163472634166,5.19722521676756,4.13766666534966,2.63262476584767,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,2.49384192028505,0,5.85661114313348,0,0,0,0,0,0.91821828489147,0,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,3.35547218566157,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,5.4037825983881,4.65478288232776,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,7.08257711780193,0.160753148465019,0.275078873194468,0,0,0,3.58422384282346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,2.58565912723101,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,2.80660409274515,4.63206443614049,0.573409195690071,2.10765197920019,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0,5.3920790099175,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.218419276384028,0,0.212574920101683,0.123935764259002,0.558644917973244,0.318004350653419,0.0788617450012534,0,0,0,7.38636088609285,1.41696576325585,4.62938191265739,3.07674546361133,0.504143392443436,3.18123361335402,6.29755017964219,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,2.97165372320936,3.90539049306924,6.82066428453907,4.94643319512473,1.09394961803644,0,0.992422356778588,0.351742488719241,0,0,1.3451348888753,0.606965604236632,0,0,0.115233987555779,0,1.42736439251347,3.6175025459567,0,0,0,11.9407848336161,0,0,0,0.9555033757741,0.214429632529969,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0.109940516745429,0,0,0,0,0.245148321753905,0,2.94462700672418,2.0793248022896,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,1.00337708206016,0,3.60354898011848,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.203977659483963,0.534434810531121,0.275684698604535,0,0.227336094654718,0,8.29169439458779,4.2407528303377,0,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p5@GABBR1 | |||
}} |
Latest revision as of 14:09, 17 September 2015
Short description: | p5@GABBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_021903, uc003nmp.3, uc003nms.3_5end |
EntrezGene: | GABBR1 |
HGNC: | 4070 |
UniProt: | Q5SUJ9Q8IW08Q9UBS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data