FFCP PHASE1:Hg19::chr1:32042131..32042151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64129 | |EntrezGene=64129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19168 | |HGNC=19168 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZM7,B4DNS5 | |UniProt=Q9GZM7,B4DNS5 | ||
|association_with_transcript=0bp_to_ENST00000271064,ENST00000461030,ENST00000466998,ENST00000476960,ENST00000537531_5end | |association_with_transcript=0bp_to_ENST00000271064,ENST00000461030,ENST00000466998,ENST00000476960,ENST00000537531_5end | ||
|cluster_id=chr1:32042131..32042151,+ | |||
|description=CAGE_peak_2_at_TINAGL1_5end | |description=CAGE_peak_2_at_TINAGL1_5end | ||
|id=chr1:32042131..32042151,+ | |id=chr1:32042131..32042151,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.39e-29!254;CL:0000076!5.91e-19!62;CL:0000213!1.71e-15!57;CL:0000215!1.71e-15!57;CL:0002139!3.98e-14!24;CL:0002078!4.52e-13!44;CL:0000115!5.02e-13!35;CL:0000220!1.44e-12!246;CL:0002321!1.68e-12!248;CL:0000071!1.70e-11!18;CL:0002546!1.70e-11!18;CL:1000497!5.99e-10!18;CL:0002518!5.99e-10!18;CL:0000222!1.07e-09!119;CL:1000449!4.69e-09!16;CL:0000223!2.58e-08!59;CL:0002076!3.31e-08!43;CL:0002681!1.09e-07!13;CL:0002584!1.09e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.39e-29!254;CL:0000076!5.91e-19!62;CL:0000213!1.71e-15!57;CL:0000215!1.71e-15!57;CL:0002139!3.98e-14!24;CL:0002078!4.52e-13!44;CL:0000115!5.02e-13!35;CL:0000220!1.44e-12!246;CL:0002321!1.68e-12!248;CL:0000071!1.70e-11!18;CL:0002546!1.70e-11!18;CL:1000497!5.99e-10!18;CL:0002518!5.99e-10!18;CL:0000222!1.07e-09!119;CL:1000449!4.69e-09!16;CL:0000223!2.58e-08!59;CL:0002076!3.31e-08!43;CL:0002681!1.09e-07!13;CL:0002584!1.09e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.20e-15;24!CL:0000071;3.82e-12;18!CL:0000115;7.24e-12;36!CL:1000497;2.71e-11;17!CL:0002518;2.71e-11;17!CL:1000449;2.34e-10;15!CL:0000076;2.85e-10;63!CL:0000213;3.72e-10;58!CL:0000215;3.72e-10;58!CL:0002078;3.44e-09;45!CL:0002681;6.49e-09;12!CL:0002584;6.49e-09;12!CL:0002076;2.19e-07;42!CL:1000413;6.25e-07;9!CL:1000507;6.41e-07;10!CL:1000494;6.41e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-31,253;CL:0000076,2.30e-19,63;CL:0000213,7.38e-17,58;CL:0000215,7.38e-17,58;CL:0002139,5.94e-15,24;CL:0000115,4.15e-14,36;CL:0002078,5.63e-14,45;CL:0000071,3.78e-12,18;CL:0002546,3.78e-12,18;CL:1000497,2.77e-11,17;CL:0002518,2.77e-11,17;CL:0002321,3.32e-11,250;CL:1000449,2.42e-10,15;CL:0002076,3.87e-09,42;CL:0002681,6.61e-09,12;CL:0002584,6.61e-09,12;CL:0000223,7.22e-09,58;CL:0000222,1.60e-08,121;CL:1000413,6.31e-07,9;CL:1000507,6.55e-07,10;CL:1000494,6.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;3.82e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.55e-25!286;UBERON:0004111!5.52e-24!241;UBERON:0000119!5.46e-21!312;UBERON:0000483!2.01e-20!309;UBERON:0000481!4.67e-19!347;UBERON:0003914!4.81e-19!118;UBERON:0000468!9.51e-18!659;UBERON:0000025!4.93e-17!194;UBERON:0000467!5.15e-17!625;UBERON:0000480!9.82e-17!626;UBERON:0004119!4.62e-15!169;UBERON:0000925!4.62e-15!169;UBERON:0006595!4.62e-15!169;UBERON:0000466!1.95e-14!126;UBERON:0003104!4.63e-13!238;UBERON:0009142!4.63e-13!238;UBERON:0000464!2.09e-12!104;UBERON:0000922!2.99e-12!612;UBERON:0003103!3.63e-12!69;UBERON:0000475!5.43e-12!365;UBERON:0005177!5.82e-12!107;UBERON:0002049!7.43e-12!79;UBERON:0007798!7.43e-12!79;UBERON:0001007!1.15e-11!155;UBERON:0001555!1.15e-11!155;UBERON:0007026!1.15e-11!155;UBERON:0002050!1.35e-11!605;UBERON:0005423!1.35e-11!605;UBERON:0000487!1.52e-11!22;UBERON:0001986!1.70e-11!18;UBERON:0004638!1.70e-11!18;UBERON:0004852!1.70e-11!18;UBERON:0000055!2.38e-11!69;UBERON:0000923!2.67e-11!604;UBERON:0005291!2.67e-11!604;UBERON:0006598!2.67e-11!604;UBERON:0002532!2.67e-11!604;UBERON:0000064!4.30e-11!219;UBERON:0002553!4.35e-11!70;UBERON:0001008!4.86e-11!45;UBERON:0004872!8.00e-11!84;UBERON:0006554!9.20e-11!44;UBERON:0009569!1.23e-10!113;UBERON:0001048!2.94e-10!168;UBERON:0003886!3.12e-10!63;UBERON:0003064!3.39e-10!37;UBERON:0002100!3.61e-10!216;UBERON:0004921!4.19e-10!129;UBERON:0004185!4.19e-10!129;UBERON:0000490!4.29e-10!138;UBERON:0006914!1.02e-09!25;UBERON:0000077!1.15e-09!130;UBERON:0004876!1.87e-09!20;UBERON:0001981!2.11e-09!60;UBERON:0007500!2.11e-09!60;UBERON:0004537!2.11e-09!60;UBERON:0006965!2.11e-09!60;UBERON:0000062!2.60e-09!511;UBERON:0000080!2.94e-09!18;UBERON:0002120!2.94e-09!18;UBERON:0004875!2.94e-09!18;UBERON:0005721!2.94e-09!18;UBERON:0005754!2.94e-09!18;UBERON:0007297!2.94e-09!18;UBERON:0006555!2.95e-09!17;UBERON:0005103!2.95e-09!17;UBERON:0000083!2.95e-09!17;UBERON:0009201!2.95e-09!17;UBERON:0004819!2.95e-09!17;UBERON:0006553!2.95e-09!17;UBERON:0003074!2.95e-09!17;UBERON:0003060!2.95e-09!17;UBERON:0000058!4.52e-09!26;UBERON:0004211!4.69e-09!16;UBERON:0001285!4.69e-09!16;UBERON:0007684!4.69e-09!16;UBERON:0003220!4.69e-09!16;UBERON:0004208!4.69e-09!16;UBERON:0003887!5.13e-09!21;UBERON:0002417!7.80e-09!61;UBERON:0000916!7.80e-09!61;UBERON:0005172!9.93e-09!55;UBERON:0005173!9.93e-09!55;UBERON:0000489!6.30e-08!32;UBERON:0001009!1.06e-07!113;UBERON:0001225!1.09e-07!13;UBERON:0008987!1.09e-07!13;UBERON:0005911!1.25e-07!82;UBERON:0000353!1.35e-07!17;UBERON:0007023!2.27e-07!115;UBERON:0002113!2.54e-07!27;UBERON:0003918!2.54e-07!27;UBERON:0005095!2.54e-07!27;UBERON:0007687!2.54e-07!27;UBERON:0001041!3.66e-07!98;UBERON:0001851!4.66e-07!16;UBERON:0004535!9.60e-07!110 | |ontology_enrichment_uberon=UBERON:0000477!4.55e-25!286;UBERON:0004111!5.52e-24!241;UBERON:0000119!5.46e-21!312;UBERON:0000483!2.01e-20!309;UBERON:0000481!4.67e-19!347;UBERON:0003914!4.81e-19!118;UBERON:0000468!9.51e-18!659;UBERON:0000025!4.93e-17!194;UBERON:0000467!5.15e-17!625;UBERON:0000480!9.82e-17!626;UBERON:0004119!4.62e-15!169;UBERON:0000925!4.62e-15!169;UBERON:0006595!4.62e-15!169;UBERON:0000466!1.95e-14!126;UBERON:0003104!4.63e-13!238;UBERON:0009142!4.63e-13!238;UBERON:0000464!2.09e-12!104;UBERON:0000922!2.99e-12!612;UBERON:0003103!3.63e-12!69;UBERON:0000475!5.43e-12!365;UBERON:0005177!5.82e-12!107;UBERON:0002049!7.43e-12!79;UBERON:0007798!7.43e-12!79;UBERON:0001007!1.15e-11!155;UBERON:0001555!1.15e-11!155;UBERON:0007026!1.15e-11!155;UBERON:0002050!1.35e-11!605;UBERON:0005423!1.35e-11!605;UBERON:0000487!1.52e-11!22;UBERON:0001986!1.70e-11!18;UBERON:0004638!1.70e-11!18;UBERON:0004852!1.70e-11!18;UBERON:0000055!2.38e-11!69;UBERON:0000923!2.67e-11!604;UBERON:0005291!2.67e-11!604;UBERON:0006598!2.67e-11!604;UBERON:0002532!2.67e-11!604;UBERON:0000064!4.30e-11!219;UBERON:0002553!4.35e-11!70;UBERON:0001008!4.86e-11!45;UBERON:0004872!8.00e-11!84;UBERON:0006554!9.20e-11!44;UBERON:0009569!1.23e-10!113;UBERON:0001048!2.94e-10!168;UBERON:0003886!3.12e-10!63;UBERON:0003064!3.39e-10!37;UBERON:0002100!3.61e-10!216;UBERON:0004921!4.19e-10!129;UBERON:0004185!4.19e-10!129;UBERON:0000490!4.29e-10!138;UBERON:0006914!1.02e-09!25;UBERON:0000077!1.15e-09!130;UBERON:0004876!1.87e-09!20;UBERON:0001981!2.11e-09!60;UBERON:0007500!2.11e-09!60;UBERON:0004537!2.11e-09!60;UBERON:0006965!2.11e-09!60;UBERON:0000062!2.60e-09!511;UBERON:0000080!2.94e-09!18;UBERON:0002120!2.94e-09!18;UBERON:0004875!2.94e-09!18;UBERON:0005721!2.94e-09!18;UBERON:0005754!2.94e-09!18;UBERON:0007297!2.94e-09!18;UBERON:0006555!2.95e-09!17;UBERON:0005103!2.95e-09!17;UBERON:0000083!2.95e-09!17;UBERON:0009201!2.95e-09!17;UBERON:0004819!2.95e-09!17;UBERON:0006553!2.95e-09!17;UBERON:0003074!2.95e-09!17;UBERON:0003060!2.95e-09!17;UBERON:0000058!4.52e-09!26;UBERON:0004211!4.69e-09!16;UBERON:0001285!4.69e-09!16;UBERON:0007684!4.69e-09!16;UBERON:0003220!4.69e-09!16;UBERON:0004208!4.69e-09!16;UBERON:0003887!5.13e-09!21;UBERON:0002417!7.80e-09!61;UBERON:0000916!7.80e-09!61;UBERON:0005172!9.93e-09!55;UBERON:0005173!9.93e-09!55;UBERON:0000489!6.30e-08!32;UBERON:0001009!1.06e-07!113;UBERON:0001225!1.09e-07!13;UBERON:0008987!1.09e-07!13;UBERON:0005911!1.25e-07!82;UBERON:0000353!1.35e-07!17;UBERON:0007023!2.27e-07!115;UBERON:0002113!2.54e-07!27;UBERON:0003918!2.54e-07!27;UBERON:0005095!2.54e-07!27;UBERON:0007687!2.54e-07!27;UBERON:0001041!3.66e-07!98;UBERON:0001851!4.66e-07!16;UBERON:0004535!9.60e-07!110 | ||
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|phase1_expression=5.08699461957559,1.49870366723688,4.22863212287913,6.00439790118782,1.78784437770915,13.9574163856059,20.2639902534648,0,0,72.4915112679451,174.450291993107,20.0966062359758,19.2549894106771,1.23766352960047,1.32558950291166,0,0,0,0,1.96993692922861,5.30401797235058,0.313454721478088,0.85870796139317,0.136874425072884,2.51085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0.619264493264304,50.568167346341,34.3374747407205,20.7062245693401,0,0,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.04841031644363,56.1316646493098,8.31310050484502,5.0133791063589,5.93870727739377,0,3.89307896242109,4.72674085820339,11.0864698731282,13.5265569967414,15.3900413709812,48.8155686312007,18.5392221392215,0,0,0,0,0,0,24.6465385134714,61.936890847641,57.2781827652531,45.2246353539208,154.795291961455,96.2913146790236,48.6958272030769,48.8407674830032,49.4515105134527,49.2039300764065,98.2903533746319,63.8628568803551,67.1170658257466,76.8415837922866,71.2924914135948,38.5774826187225,54.1115788029069,43.2428085055957,42.9286584904473,42.7169546805658,72.5478905964413,0,0,54.9478505699593,44.7274756525787,27.4788210312138,0.794455084879313,4.58938593198102,6.38403087957043,29.1552352074,19.2148192313469,12.0867098724408,1.8672662123986,5.38842688278752,18.6346569549343,1.66493170409425,0,0,0,7.41613368007784,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,13.6524204290704,7.90479955997862,0.168336113954066,0.375355559615893,0.277064115484183,0,0.919463387397059,6.91095070970345,8.73427810332162,1.07633781413317,0.427114777637135,0,1.20036438433761,0.309157587715317,10.0479810617795,8.56137539125313,0.168776332241266,1.36411807225678,0.504867548488229,0.368199594569197,2.42469085228218,0.710019185033229,0.201504196455281,2.20428770003634,39.6184748984759,35.7297417973993,97.5135624322613,1.46368447355514,1.45782745153634,1.16193942869518,3.31715376049185,3.02785021050754,1.45990943630332,0,5.78916844373597,0,0.464367928031979,0,3.43089720115547,3.03452442140583,2.41011029883482,4.30146493656336,3.05031221729369,4.27087114399974,4.85392709376592,2.5508790466295,2.69323009862473,197.825661839406,16.8290128564135,11.9356463286106,14.7008711385542,0,0.982827216677626,14.7697476670351,0,7.2563178740437,30.367502422839,17.3405450945628,20.2323155863715,21.4126711236774,10.4624943029138,0,0,21.649701303791,2.89826012437692,26.2995475088241,35.9472454925074,21.2973335785241,34.8165098589315,0,0,0,0,0,33.7441802352397,59.9696197669929,34.3095735326575,31.7037170368083,42.4325550230384,55.5904884789556,0.492663237895943,0,0.414656231081544,0.720599767084807,0.25248486685276,0,0,0,10.2643467613623,0,0,0,8.29770024155669,32.2610450936627,3.9602674343313,1.93907573636667,25.0359512096318,2.535908257668,0.797814349754612,0,2.31486636835928,0,1.0656887160644,8.14974563851441,1.62786481617433,0.823240336780769,1.95441710576241,6.04166312862328,0.791951872933429,34.6655283618524,70.5942101466238,38.6895475874561,0,0,0,6.9491208092559,16.0806710167759,0,0,0.61642896765115,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,1.59498939234882,1.50051156317903,0.542530047399471,26.2043285528817,1.42743191037729,4.41566762095017,2.34282829985426,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.521301686808497,1.56640925970192,0.686286847621712,0,0,0,3.94065842880137,4.99306318531491,3.93107381328584,3.2254015016441,4.29693525206575,3.36792113319688,4.86928767171664,6.14048698880044,4.02134802859019,25.2310712956485,0.154209693802656,2.30830242907065,0.410635780069046,0.519254429183621,1.62694529843943,14.0196961526282,136.344399806234,15.5616871301665,0.918515585316854,0.182091168006717,0.786746489756545,49.1807578069079,28.418659391529,130.986411452535,42.3803751494456,19.8437062318606,159.226737699255,119.405781104114,44.0468468848364,112.585894463911,92.3927352024538,116.893717308181,48.1716156055122,72.303612776799,30.8947161516606,0,0,4.35965212697862,22.30499590758,2.92840555197873,53.3752440335201,0,0,11.4853107599234,18.2016868890226,4.82051789532479,0.676695028044854,2.15668063960502,0.307007349452259,2.75673144969061,0.214840489736547,0.435050081742686,2.04543905798642,0.267096106940212,36.5279662947762,39.9755340119421,59.3399113099816,24.1767096244764,0.464845549297286,2.20368642781448,0.6970372701606,3.69640296211307,12.2430386972915,0.869932992075073,8.15426564057248,26.1918542737844,2.97726695487734,29.7396659235602,10.4846606658104,2.303080121802,0.42793898803392,0.318203247925937,4.70969184119538,0,1.64722217841633,0.942499218765491,10.5134890418124,15.8510321173008,2.94880919367287,1.46290121726877,41.4312932373184,1.05650146756755,14.6054905206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| ||
|short_description=p2@TINAGL1 | |short_description=p2@TINAGL1 | ||
}} | }} |
Latest revision as of 13:34, 17 September 2015
Short description: | p2@TINAGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TINAGL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000271064, ENST00000461030, ENST00000466998, ENST00000476960, ENST00000537531_5end |
EntrezGene: | TINAGL1 |
HGNC: | 19168 |
UniProt: | Q9GZM7B4DNS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.96e-31 | 253 |
squamous epithelial cell | 2.30e-19 | 63 |
lining cell | 7.38e-17 | 58 |
barrier cell | 7.38e-17 | 58 |
endothelial cell of vascular tree | 5.94e-15 | 24 |
endothelial cell | 4.15e-14 | 36 |
meso-epithelial cell | 5.63e-14 | 45 |
blood vessel endothelial cell | 3.78e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.78e-12 | 18 |
kidney cell | 2.77e-11 | 17 |
kidney epithelial cell | 2.77e-11 | 17 |
embryonic cell | 3.32e-11 | 250 |
epithelial cell of nephron | 2.42e-10 | 15 |
endo-epithelial cell | 3.87e-09 | 42 |
kidney cortical cell | 6.61e-09 | 12 |
renal cortical epithelial cell | 6.61e-09 | 12 |
endodermal cell | 7.22e-09 | 58 |
mesodermal cell | 1.60e-08 | 121 |
endothelial cell of artery | 6.31e-07 | 9 |
kidney tubule cell | 6.55e-07 | 10 |
nephron tubule epithelial cell | 6.55e-07 | 10 |