FFCP PHASE1:Hg19::chr2:47596415..47596470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt=P16422 | |UniProt=P16422 | ||
|association_with_transcript=128bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | |association_with_transcript=128bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | ||
|cluster_id=chr2:47596415..47596470,+ | |||
|description=CAGE_peak_1_at_EPCAM_5end | |description=CAGE_peak_1_at_EPCAM_5end | ||
|id=chr2:47596415..47596470,+ | |id=chr2:47596415..47596470,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.09e-27!254;CL:0000223!2.91e-14!59;CL:0002076!3.70e-13!43 | |ontology_enrichment_celltype=CL:0000066!4.09e-27!254;CL:0000223!2.91e-14!59;CL:0002076!3.70e-13!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.73e-13;42!CL:0002251;7.21e-08;20!CL:1000507;2.41e-07;10!CL:1000494;2.41e-07;10!CL:0000039;2.67e-07;7!CL:0000586;2.67e-07;7!CL:0000082;5.73e-07;19!CL:1000497;7.36e-07;17!CL:0002518;7.36e-07;17 | |ontology_enrichment_celltype_v019=CL:0002076;8.73e-13;42!CL:0002251;7.21e-08;20!CL:1000507;2.41e-07;10!CL:1000494;2.41e-07;10!CL:0000039;2.67e-07;7!CL:0000586;2.67e-07;7!CL:0000082;5.73e-07;19!CL:1000497;7.36e-07;17!CL:0002518;7.36e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-30,253;CL:0000223,1.82e-18,58;CL:0002076,1.54e-16,42;CL:0002251,7.05e-08,20;CL:1000507,2.44e-07,10;CL:1000494,2.44e-07,10;CL:0000039,2.67e-07,7;CL:0000586,2.67e-07,7;CL:0000082,5.61e-07,19;CL:1000497,7.11e-07,17;CL:0002518,7.11e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;4.12e-10;58!UBERON:0001041;9.76e-10;30!UBERON:0006595;1.08e-07;86 | |ontology_enrichment_development_v019=CL:0000223;4.12e-10;58!UBERON:0001041;9.76e-10;30!UBERON:0006595;1.08e-07;86 | ||
|ontology_enrichment_disease=DOID:305!8.18e-28!106;DOID:0050687!2.77e-18!143;DOID:299!7.17e-12!25;DOID:1749!5.63e-09!14 | |ontology_enrichment_disease=DOID:305!8.18e-28!106;DOID:0050687!2.77e-18!143;DOID:299!7.17e-12!25;DOID:1749!5.63e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:299;2.10e-14;25!DOID:1749;1.52e-10;14!DOID:305;1.81e-10;106 | |ontology_enrichment_disease_v019=DOID:299;2.10e-14;25!DOID:1749;1.52e-10;14!DOID:305;1.81e-10;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.20e-31,106;DOID:0050687,6.48e-21,143;DOID:299,1.95e-14,25;DOID:1749,1.50e-10,14;DOID:162,3.34e-08,235;DOID:14566,1.62e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-19!169;UBERON:0000925!5.16e-19!169;UBERON:0006595!5.16e-19!169;UBERON:0001007!9.04e-17!155;UBERON:0001555!9.04e-17!155;UBERON:0007026!9.04e-17!155;UBERON:0004921!3.86e-16!129;UBERON:0004185!3.86e-16!129;UBERON:0005177!2.14e-14!107;UBERON:0000466!3.08e-14!126;UBERON:0000077!3.41e-13!130;UBERON:0000464!9.39e-13!104;UBERON:0000062!3.46e-12!511;UBERON:0005911!2.22e-11!82;UBERON:0001041!3.94e-10!98;UBERON:0007023!1.75e-09!115;UBERON:0000064!1.88e-09!219;UBERON:0000481!6.66e-09!347;UBERON:0009569!1.24e-08!113;UBERON:0001004!2.18e-08!72;UBERON:0005409!2.31e-08!35;UBERON:0001008!2.44e-08!45;UBERON:0005153!2.50e-08!37;UBERON:0006554!4.19e-08!44;UBERON:0005181!9.73e-08!35;UBERON:0005178!1.16e-07!34;UBERON:0002224!1.16e-07!34;UBERON:0000160!1.32e-07!27;UBERON:0000489!1.61e-07!32;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22;UBERON:0000922!3.85e-07!612;UBERON:0000065!4.99e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!5.16e-19!169;UBERON:0000925!5.16e-19!169;UBERON:0006595!5.16e-19!169;UBERON:0001007!9.04e-17!155;UBERON:0001555!9.04e-17!155;UBERON:0007026!9.04e-17!155;UBERON:0004921!3.86e-16!129;UBERON:0004185!3.86e-16!129;UBERON:0005177!2.14e-14!107;UBERON:0000466!3.08e-14!126;UBERON:0000077!3.41e-13!130;UBERON:0000464!9.39e-13!104;UBERON:0000062!3.46e-12!511;UBERON:0005911!2.22e-11!82;UBERON:0001041!3.94e-10!98;UBERON:0007023!1.75e-09!115;UBERON:0000064!1.88e-09!219;UBERON:0000481!6.66e-09!347;UBERON:0009569!1.24e-08!113;UBERON:0001004!2.18e-08!72;UBERON:0005409!2.31e-08!35;UBERON:0001008!2.44e-08!45;UBERON:0005153!2.50e-08!37;UBERON:0006554!4.19e-08!44;UBERON:0005181!9.73e-08!35;UBERON:0005178!1.16e-07!34;UBERON:0002224!1.16e-07!34;UBERON:0000160!1.32e-07!27;UBERON:0000489!1.61e-07!32;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22;UBERON:0000922!3.85e-07!612;UBERON:0000065!4.99e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.12e-10;22!UBERON:0004921;6.51e-10;33!UBERON:0006554;7.60e-10;30!UBERON:0001008;7.60e-10;30!UBERON:0002048;1.30e-08;22!UBERON:0000117;1.30e-08;22!UBERON:0000171;1.30e-08;22!UBERON:0000170;1.30e-08;22!UBERON:0004807;2.20e-08;22!UBERON:0000160;2.29e-08;17!UBERON:0005178;2.96e-08;34!UBERON:0002224;2.96e-08;34!UBERON:0005181;6.77e-08;35!UBERON:0000489;8.33e-08;29!UBERON:0002113;9.39e-08;24!UBERON:0011143;9.39e-08;24!UBERON:0005911;2.20e-07;36!UBERON:0004211;2.41e-07;10!UBERON:0009773;2.41e-07;10!UBERON:0001231;2.41e-07;10!UBERON:0004810;2.41e-07;10!UBERON:0000922;4.35e-07;49!UBERON:0004802;5.73e-07;19!UBERON:0000115;5.73e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0005409;4.12e-10;22!UBERON:0004921;6.51e-10;33!UBERON:0006554;7.60e-10;30!UBERON:0001008;7.60e-10;30!UBERON:0002048;1.30e-08;22!UBERON:0000117;1.30e-08;22!UBERON:0000171;1.30e-08;22!UBERON:0000170;1.30e-08;22!UBERON:0004807;2.20e-08;22!UBERON:0000160;2.29e-08;17!UBERON:0005178;2.96e-08;34!UBERON:0002224;2.96e-08;34!UBERON:0005181;6.77e-08;35!UBERON:0000489;8.33e-08;29!UBERON:0002113;9.39e-08;24!UBERON:0011143;9.39e-08;24!UBERON:0005911;2.20e-07;36!UBERON:0004211;2.41e-07;10!UBERON:0009773;2.41e-07;10!UBERON:0001231;2.41e-07;10!UBERON:0004810;2.41e-07;10!UBERON:0000922;4.35e-07;49!UBERON:0004802;5.73e-07;19!UBERON:0000115;5.73e-07;19 | ||
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| ||
|short_description=p1@EPCAM | |short_description=p1@EPCAM | ||
}} | }} |
Latest revision as of 12:08, 17 September 2015
Short description: | p1@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | P16422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.61e-30 | 253 |
endodermal cell | 1.82e-18 | 58 |
endo-epithelial cell | 1.54e-16 | 42 |
epithelial cell of alimentary canal | 7.05e-08 | 20 |
kidney tubule cell | 2.44e-07 | 10 |
nephron tubule epithelial cell | 2.44e-07 | 10 |
germ line cell | 2.67e-07 | 7 |
germ cell | 2.67e-07 | 7 |
epithelial cell of lung | 5.61e-07 | 19 |
kidney cell | 7.11e-07 | 17 |
kidney epithelial cell | 7.11e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.20e-31 | 106 |
cell type cancer | 6.48e-21 | 143 |
adenocarcinoma | 1.95e-14 | 25 |
squamous cell carcinoma | 1.50e-10 | 14 |
cancer | 3.34e-08 | 235 |
disease of cellular proliferation | 1.62e-07 | 239 |