FFCP PHASE1:Hg19::chr10:18429342..18429359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=Q08289,Q6TME3,A6PVM6 | |UniProt=Q08289,Q6TME3,A6PVM6 | ||
|association_with_transcript=-246bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | |association_with_transcript=-246bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | ||
|cluster_id=chr10:18429342..18429359,+ | |||
|coexpression_cluster_id=C3004 | |coexpression_cluster_id=C3004 | ||
|description=CAGE_peak_3_at_CACNB2_5end | |description=CAGE_peak_3_at_CACNB2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.36e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.36e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@CACNB2 | |short_description=p3@CACNB2 | ||
}} | }} |
Latest revision as of 11:52, 17 September 2015
Short description: | p3@CACNB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNB2_5end |
Coexpression cluster: | C3004_smooth_putamen_bladder_vagina_neuroectodermal_caudate_salivary |
Association with transcript: | -246bp_to_ENST00000324631, NM_201593, NM_201596, NM_201597, uc001ipr.2, uc001ips.2, uc001ipt.2, uc009xjz.1_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | Q08289Q6TME3A6PVM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data