FFCP PHASE1:Hg19::chr11:26743550..26743567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159963 | |EntrezGene=159963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28750 | |HGNC=28750 | ||
|TSSclassifier=strong | |||
|UniProt=Q1EHB4 | |UniProt=Q1EHB4 | ||
|association_with_transcript=3bp_to_ENST00000396005_5end | |association_with_transcript=3bp_to_ENST00000396005_5end | ||
|cluster_id=chr11:26743550..26743567,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_SLC5A12_5end | |description=CAGE_peak_1_at_SLC5A12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.62e-19;1!UBERON:0007297;2.72e-10;2!UBERON:0003918;3.25e-08;10!UBERON:0007687;3.25e-08;10 | |ontology_enrichment_development_v019=UBERON:0004140;5.62e-19;1!UBERON:0007297;2.72e-10;2!UBERON:0003918;3.25e-08;10!UBERON:0007687;3.25e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.82e-09!1;UBERON:0002079!5.31e-09!1;UBERON:0007029!6.22e-09!1;UBERON:0002135!7.27e-09!1;UBERON:0000160!5.67e-07!27 | |ontology_enrichment_uberon=UBERON:0001301!2.82e-09!1;UBERON:0002079!5.31e-09!1;UBERON:0007029!6.22e-09!1;UBERON:0002135!7.27e-09!1;UBERON:0000160!5.67e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.93e-33;4!UBERON:0000160;3.47e-25;17!UBERON:0005409;9.28e-20;22!UBERON:0001301;3.25e-19;1!UBERON:0004921;4.37e-12;33!UBERON:0000922;1.38e-09;49!UBERON:0001155;5.75e-09;9!UBERON:0000059;1.70e-07;11!UBERON:0006947;2.79e-07;3!UBERON:0004054;2.79e-07;3!UBERON:0002114;3.06e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.93e-33;4!UBERON:0000160;3.47e-25;17!UBERON:0005409;9.28e-20;22!UBERON:0001301;3.25e-19;1!UBERON:0004921;4.37e-12;33!UBERON:0000922;1.38e-09;49!UBERON:0001155;5.75e-09;9!UBERON:0000059;1.70e-07;11!UBERON:0006947;2.79e-07;3!UBERON:0004054;2.79e-07;3!UBERON:0002114;3.06e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.78e-33,4;UBERON:0000160,3.47e-25,17;UBERON:0001301,3.25e-19,1;UBERON:0005409,1.69e-17,25;UBERON:0001155,5.87e-09,9;UBERON:0000059,1.73e-07,11;UBERON:0006947,2.79e-07,3;UBERON:0004054,2.79e-07,3;UBERON:0002114,2.97e-07,2;UBERON:0002113,7.26e-07,26;UBERON:0003918,7.26e-07,26;UBERON:0011143,7.26e-07,26;UBERON:0005095,7.26e-07,26;UBERON:0007687,7.26e-07,26 | |||
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|short_description=p1@SLC5A12 | |short_description=p1@SLC5A12 | ||
}} | }} |
Latest revision as of 11:33, 17 September 2015
Short description: | p1@SLC5A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A12_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 3bp_to_ENST00000396005_5end |
EntrezGene: | SLC5A12 |
HGNC: | 28750 |
UniProt: | Q1EHB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.78e-33 | 4 |
intestine | 3.47e-25 | 17 |
epididymis | 3.25e-19 | 1 |
gastrointestinal system | 1.69e-17 | 25 |
colon | 5.87e-09 | 9 |
large intestine | 1.73e-07 | 11 |
male genital duct | 2.79e-07 | 3 |
internal male genitalia | 2.79e-07 | 3 |
duodenum | 2.97e-07 | 2 |
kidney | 7.26e-07 | 26 |
kidney mesenchyme | 7.26e-07 | 26 |
upper urinary tract | 7.26e-07 | 26 |
kidney rudiment | 7.26e-07 | 26 |
kidney field | 7.26e-07 | 26 |