FFCP PHASE1:Hg19::chr3:190106022..190106042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10686 | |EntrezGene=10686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2037 | |HGNC=2037 | ||
|TSSclassifier=strong | |||
|UniProt=A0SDD8 | |UniProt=A0SDD8 | ||
|association_with_transcript=113bp_to_CU687000,DQ305102,HQ448426_5end | |association_with_transcript=113bp_to_CU687000,DQ305102,HQ448426_5end | ||
|cluster_id=chr3:190106022..190106042,+ | |||
|coexpression_cluster_id=C601 | |||
|description=CAGE_peak_2_at_CLDN16_5end | |description=CAGE_peak_2_at_CLDN16_5end | ||
|id=chr3:190106022..190106042,+ | |id=chr3:190106022..190106042,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.41e-24!12;CL:1000494!1.41e-24!12;CL:1000449!2.44e-18!16;CL:1000497!2.96e-16!18;CL:0002518!2.96e-16!18;CL:0002681!6.16e-16!13;CL:0002584!6.16e-16!13;CL:0002149!1.65e-13!6;CL:0002255!1.65e-13!6;CL:0000239!3.19e-12!3;CL:1000615!3.19e-12!3;CL:0002306!3.19e-12!3;CL:0002616!1.25e-09!1;CL:0000946!2.46e-09!1;CL:0000786!2.46e-09!1;CL:0000980!2.46e-09!1;CL:0000499!1.25e-07!27 | |ontology_enrichment_celltype=CL:1000507!1.41e-24!12;CL:1000494!1.41e-24!12;CL:1000449!2.44e-18!16;CL:1000497!2.96e-16!18;CL:0002518!2.96e-16!18;CL:0002681!6.16e-16!13;CL:0002584!6.16e-16!13;CL:0002149!1.65e-13!6;CL:0002255!1.65e-13!6;CL:0000239!3.19e-12!3;CL:1000615!3.19e-12!3;CL:0002306!3.19e-12!3;CL:0002616!1.25e-09!1;CL:0000946!2.46e-09!1;CL:0000786!2.46e-09!1;CL:0000980!2.46e-09!1;CL:0000499!1.25e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.24e-24;10!CL:1000494;2.24e-24;10!CL:0002149;1.34e-23;6!CL:0002255;1.34e-23;6!CL:0000239;4.69e-21;3!CL:1000615;4.69e-21;3!CL:0002306;4.69e-21;3!CL:1000449;2.18e-16;15!CL:1000497;1.67e-14;17!CL:0002518;1.67e-14;17!CL:0002681;6.11e-12;12!CL:0002584;6.11e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.46e-24,10;CL:1000494,2.46e-24,10;CL:0002149,1.15e-23,6;CL:0002255,1.15e-23,6;CL:0000239,4.94e-21,3;CL:1000615,4.94e-21,3;CL:0002306,4.94e-21,3;CL:1000449,2.31e-16,15;CL:1000497,1.76e-14,17;CL:0002518,1.76e-14,17;CL:0002681,6.11e-12,12;CL:0002584,6.11e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.13e-07;10!UBERON:0007687;4.13e-07;10!UBERON:0005795;5.26e-07;10 | |||
|ontology_enrichment_disease=DOID:4468!2.24e-18!2;DOID:3001!1.65e-13!6;DOID:120!5.97e-11!27;DOID:193!3.67e-10!29;DOID:2355!8.91e-10!1;DOID:3371!1.91e-09!1;DOID:4549!1.91e-09!1;DOID:5861!1.91e-09!1;DOID:6496!1.91e-09!1;DOID:299!1.72e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;6.27e-32;2!DOID:3001;1.34e-23;6!DOID:2355;2.08e-16;1!DOID:299;1.92e-15;25!DOID:120;2.65e-14;27!DOID:193;2.54e-13;29!DOID:74;7.21e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.27e-32,2;DOID:3001,1.15e-23,6;DOID:2355,2.25e-16,1;DOID:299,1.81e-15,25;DOID:120,2.50e-14,27;DOID:193,2.42e-13,29;DOID:74,7.49e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;2.24e-24;10!UBERON:0009773;2.24e-24;10!UBERON:0001231;2.24e-24;10!UBERON:0004810;2.24e-24;10!UBERON:0002113;1.60e-22;24!UBERON:0011143;1.60e-22;24!UBERON:0006853;4.69e-21;3!UBERON:0007685;4.69e-21;3!UBERON:0004134;4.69e-21;3!UBERON:0000489;1.28e-18;29!UBERON:0006554;5.40e-18;30!UBERON:0001008;5.40e-18;30!UBERON:0006555;2.18e-16;15!UBERON:0004819;2.18e-16;15!UBERON:0001285;2.18e-16;15!UBERON:0007684;2.18e-16;15!UBERON:0001225;6.11e-12;12!UBERON:0008987;6.11e-12;12!UBERON:0001851;1.13e-09;15!UBERON:0000353;1.13e-09;15!UBERON:0000995;9.74e-09;17!UBERON:0003975;2.78e-08;18!UBERON:0005172;2.28e-07;52!UBERON:0005173;2.28e-07;52!UBERON:0004175;3.57e-07;21 | |||
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|short_description=p2@CLDN16 | |short_description=p2@CLDN16 | ||
}} | }} |
Latest revision as of 09:56, 17 September 2015
Short description: | p2@CLDN16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN16_5end |
Coexpression cluster: | C601_endometrial_clear_thyroid_kidney_Renal_serous_endometrioid |
Association with transcript: | 113bp_to_CU687000, DQ305102, HQ448426_5end |
EntrezGene: | CLDN16 |
HGNC: | 2037 |
UniProt: | A0SDD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.46e-24 | 10 |
nephron tubule epithelial cell | 2.46e-24 | 10 |
epithelial cell of uterus | 1.15e-23 | 6 |
stromal cell of endometrium | 1.15e-23 | 6 |
brush border epithelial cell | 4.94e-21 | 3 |
kidney cortex tubule cell | 4.94e-21 | 3 |
epithelial cell of proximal tubule | 4.94e-21 | 3 |
epithelial cell of nephron | 2.31e-16 | 15 |
kidney cell | 1.76e-14 | 17 |
kidney epithelial cell | 1.76e-14 | 17 |
kidney cortical cell | 6.11e-12 | 12 |
renal cortical epithelial cell | 6.11e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.46e-24 | 10 |
renal cortex tubule | 4.94e-21 | 3 |
region of nephron tubule | 4.94e-21 | 3 |
proximal tubule | 4.94e-21 | 3 |
kidney | 9.28e-21 | 26 |
kidney mesenchyme | 9.28e-21 | 26 |
upper urinary tract | 9.28e-21 | 26 |
kidney rudiment | 9.28e-21 | 26 |
kidney field | 9.28e-21 | 26 |
cavitated compound organ | 2.17e-17 | 31 |
nephron epithelium | 2.31e-16 | 15 |
renal tubule | 2.31e-16 | 15 |
nephron tubule | 2.31e-16 | 15 |
nephron | 2.31e-16 | 15 |
uriniferous tubule | 2.31e-16 | 15 |
nephrogenic mesenchyme | 2.31e-16 | 15 |
excretory tube | 2.31e-15 | 16 |
kidney epithelium | 2.31e-15 | 16 |
cortex of kidney | 6.11e-12 | 12 |
renal parenchyma | 6.11e-12 | 12 |
urinary system structure | 2.09e-11 | 47 |
renal system | 3.66e-11 | 48 |
abdomen element | 6.77e-10 | 54 |
abdominal segment element | 6.77e-10 | 54 |
cortex | 1.13e-09 | 15 |
parenchyma | 1.13e-09 | 15 |
abdominal segment of trunk | 7.02e-09 | 60 |
abdomen | 7.02e-09 | 60 |
compound organ | 8.39e-08 | 68 |
uterus | 3.42e-07 | 21 |
embryonic uterus | 6.89e-07 | 22 |
internal female genitalia | 6.89e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.27e-32 | 2 |
female reproductive endometrioid cancer | 1.15e-23 | 6 |
anemia | 2.25e-16 | 1 |
adenocarcinoma | 1.81e-15 | 25 |
female reproductive organ cancer | 2.50e-14 | 27 |
reproductive organ cancer | 2.42e-13 | 29 |
hematopoietic system disease | 7.49e-09 | 2 |