FFCP PHASE1:Hg19::chr20:58179950..58179977,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KR7 | |UniProt=Q96KR7 | ||
|association_with_transcript=347bp_to_ENST00000371015,ENST00000395639,NM_080672,uc002yau.2_5end | |association_with_transcript=347bp_to_ENST00000371015,ENST00000395639,NM_080672,uc002yau.2_5end | ||
|cluster_id=chr20:58179950..58179977,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_PHACTR3_5end | |description=CAGE_peak_5_at_PHACTR3_5end | ||
|id=chr20:58179950..58179977,+ | |id=chr20:58179950..58179977,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-21;82!UBERON:0006215;1.42e-09;3!UBERON:0006241;1.70e-09;3!UBERON:0003057;1.70e-09;3!UBERON:0010122;5.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;5.67e-65;34!UBERON:0002020;5.67e-65;34!UBERON:0001893;6.08e-65;34!UBERON:0002791;3.73e-63;32!UBERON:0001869;6.43e-63;32!UBERON:0002619;5.90e-59;22!UBERON:0002780;1.56e-58;41!UBERON:0001890;1.56e-58;41!UBERON:0000073;1.28e-56;53!UBERON:0002616;1.28e-56;53!UBERON:0001950;7.20e-53;20!UBERON:0000956;1.78e-51;25!UBERON:0000203;1.78e-51;25!UBERON:0001017;3.30e-37;75!UBERON:0000955;6.44e-37;68!UBERON:0001016;1.85e-36;83!UBERON:0002420;1.57e-27;9!UBERON:0007245;1.57e-27;9!UBERON:0010009;1.57e-27;9!UBERON:0010011;1.57e-27;9!UBERON:0000454;1.57e-27;9!UBERON:0000125;1.81e-27;9!UBERON:0002308;1.81e-27;9!UBERON:0009663;9.13e-22;7!UBERON:0000200;1.69e-19;6!UBERON:0004732;4.44e-18;13!UBERON:0001871;1.03e-16;6!UBERON:0001872;1.34e-16;5!UBERON:0000349;2.63e-16;5!UBERON:0007023;2.06e-15;114!UBERON:0004733;2.33e-15;12!UBERON:0002028;2.33e-15;12!UBERON:0011216;4.57e-15;132!UBERON:0002298;3.60e-13;6!UBERON:0000369;1.60e-12;4!UBERON:0002435;1.60e-12;4!UBERON:0000204;1.60e-12;4!UBERON:0002680;7.57e-12;9!UBERON:0001895;7.57e-12;9!UBERON:0002021;3.98e-11;5!UBERON:0001870;9.56e-11;3!UBERON:0000988;3.11e-10;3!UBERON:0005383;1.06e-09;3!UBERON:0005382;1.06e-09;3!UBERON:0002240;1.70e-09;3!UBERON:0005174;1.70e-09;3!UBERON:0001137;1.70e-09;3!UBERON:0010314;1.11e-08;132!UBERON:0001897;3.53e-08;2!UBERON:0010225;3.53e-08;2!UBERON:0005162;3.78e-08;2!UBERON:0000122;3.78e-08;2!UBERON:0001894;7.53e-08;7!UBERON:0002702;9.70e-08;2!UBERON:0001954;1.04e-07;2!UBERON:0003022;1.04e-07;2!UBERON:0002421;1.04e-07;2!UBERON:0002600;1.04e-07;2!UBERON:0001875;1.16e-07;2!UBERON:0006514;1.16e-07;2!UBERON:0001876;1.84e-07;2!UBERON:0002771;1.96e-07;2!UBERON:0002148;2.13e-07;2!UBERON:0006331;2.13e-07;2!UBERON:0009662;2.13e-07;2!UBERON:0001873;5.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.43e-105,56;UBERON:0005068,1.43e-105,56;UBERON:0006241,1.43e-105,56;UBERON:0007135,1.43e-105,56;UBERON:0001016,2.28e-103,89;UBERON:0001017,4.73e-99,81;UBERON:0000073,2.30e-97,53;UBERON:0002616,2.30e-97,53;UBERON:0000955,9.64e-85,68;UBERON:0006238,9.64e-85,68;UBERON:0002780,6.16e-83,41;UBERON:0001890,6.16e-83,41;UBERON:0003080,6.16e-83,41;UBERON:0006240,6.16e-83,41;UBERON:0001893,9.75e-78,34;UBERON:0003528,2.26e-77,34;UBERON:0002020,2.26e-77,34;UBERON:0003075,1.35e-72,82;UBERON:0007284,1.35e-72,82;UBERON:0002791,1.66e-71,32;UBERON:0001869,3.69e-71,32;UBERON:0002346,9.84e-69,86;UBERON:0002619,7.07e-59,22;UBERON:0003056,7.83e-57,61;UBERON:0010371,5.43e-55,104;UBERON:0001950,9.83e-53,20;UBERON:0000956,2.09e-51,25;UBERON:0000203,2.09e-51,25;UBERON:0004121,1.02e-48,171;UBERON:0000924,1.02e-48,171;UBERON:0006601,1.02e-48,171;UBERON:0007023,3.74e-47,114;UBERON:0010314,4.10e-43,132;UBERON:0011216,3.29e-39,223;UBERON:0002420,1.70e-27,9;UBERON:0007245,1.70e-27,9;UBERON:0010009,1.70e-27,9;UBERON:0010011,1.70e-27,9;UBERON:0000454,1.70e-27,9;UBERON:0000125,1.99e-27,9;UBERON:0002308,1.99e-27,9;UBERON:0000025,2.80e-23,192;UBERON:0003076,1.22e-22,15;UBERON:0003057,1.22e-22,15;UBERON:0009663,1.09e-21,7;UBERON:0000200,2.49e-19,6;UBERON:0004732,3.24e-18,13;UBERON:0001871,1.11e-16,6;UBERON:0001872,1.63e-16,5;UBERON:0004111,1.87e-16,240;UBERON:0000349,2.32e-16,5;UBERON:0004733,1.78e-15,12;UBERON:0002028,1.78e-15,12;UBERON:0007277,1.78e-15,12;UBERON:0002298,2.44e-13,6;UBERON:0000369,1.96e-12,4;UBERON:0002435,1.96e-12,4;UBERON:0000204,1.96e-12,4;UBERON:0010082,1.96e-12,4;UBERON:0002680,7.06e-12,9;UBERON:0001895,7.06e-12,9;UBERON:0010092,7.06e-12,9;UBERON:0000483,1.94e-11,306;UBERON:0000119,3.18e-11,309;UBERON:0002021,3.73e-11,5;UBERON:0001870,1.07e-10,3;UBERON:0000988,2.65e-10,3;UBERON:0005383,1.16e-09,3;UBERON:0005382,1.16e-09,3;UBERON:0002240,1.53e-09,3;UBERON:0005174,1.53e-09,3;UBERON:0001137,1.53e-09,3;UBERON:0001897,3.60e-08,2;UBERON:0005162,3.60e-08,2;UBERON:0000122,3.60e-08,2;UBERON:0010225,3.60e-08,2;UBERON:0000923,6.80e-08,560;UBERON:0010316,6.80e-08,560;UBERON:0005291,6.80e-08,560;UBERON:0006598,6.80e-08,560;UBERON:0010317,6.80e-08,560;UBERON:0002532,6.80e-08,560;UBERON:0001894,8.09e-08,7;UBERON:0006222,8.09e-08,7;UBERON:0001954,8.93e-08,2;UBERON:0003022,8.93e-08,2;UBERON:0002421,8.93e-08,2;UBERON:0002600,8.93e-08,2;UBERON:0002050,9.59e-08,564;UBERON:0002702,1.13e-07,2;UBERON:0001875,1.13e-07,2;UBERON:0006514,1.13e-07,2;UBERON:0001876,1.67e-07,2;UBERON:0002148,1.96e-07,2;UBERON:0006331,1.96e-07,2;UBERON:0009662,1.96e-07,2;UBERON:0002771,2.16e-07,2;UBERON:0005423,3.94e-07,581;UBERON:0001873,5.42e-07,2;UBERON:0010122,5.42e-07,2;UBERON:0000922,9.42e-07,592 | |||
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|short_description=p5@PHACTR3 | |short_description=p5@PHACTR3 | ||
}} | }} |
Latest revision as of 07:53, 17 September 2015
Short description: | p5@PHACTR3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHACTR3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 347bp_to_ENST00000371015, ENST00000395639, NM_080672, uc002yau.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | Q96KR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data