FFCP PHASE1:Hg19::chr5:161494744..161494768,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:161494744..161494768,+ to FFCP PHASE1:Hg19::chr5:161494744..161494768,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2566 | |EntrezGene=2566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4087 | |HGNC=4087 | ||
|TSSclassifier=strong | |||
|UniProt=F5HB82 | |UniProt=F5HB82 | ||
|association_with_transcript=-12bp_to_ENST00000414552_5end | |||
|cluster_id=chr5:161494744..161494768,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GABRG2_5end | |||
|id=chr5:161494744..161494768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.29e-22;82!UBERON:0006215;2.16e-11;3!UBERON:0006241;1.78e-10;3!UBERON:0003057;1.78e-10;3!UBERON:0010122;1.18e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-112!57;UBERON:0005068!2.06e-112!57;UBERON:0006241!2.06e-112!57;UBERON:0007135!2.06e-112!57;UBERON:0001017!9.67e-101!82;UBERON:0005743!5.57e-99!86;UBERON:0002616!4.36e-95!59;UBERON:0000073!1.32e-91!94;UBERON:0001016!1.32e-91!94;UBERON:0002780!3.49e-90!41;UBERON:0001890!3.49e-90!41;UBERON:0006240!3.49e-90!41;UBERON:0000955!1.05e-89!69;UBERON:0006238!1.05e-89!69;UBERON:0003080!7.88e-88!42;UBERON:0003075!1.39e-79!86;UBERON:0007284!1.39e-79!86;UBERON:0002346!1.78e-75!90;UBERON:0002020!1.91e-72!34;UBERON:0003528!1.91e-72!34;UBERON:0001893!3.31e-72!34;UBERON:0002791!2.20e-69!33;UBERON:0001869!8.58e-68!32;UBERON:0003056!1.04e-60!61;UBERON:0007023!2.63e-59!115;UBERON:0002619!1.02e-56!22;UBERON:0001950!1.24e-51!20;UBERON:0000033!1.82e-49!123;UBERON:0000956!2.06e-49!25;UBERON:0000203!2.06e-49!25;UBERON:0000153!1.42e-46!129;UBERON:0007811!1.42e-46!129;UBERON:0004121!3.12e-45!169;UBERON:0000924!7.20e-44!173;UBERON:0006601!7.20e-44!173;UBERON:0000025!3.66e-29!194;UBERON:0002420!2.32e-24!9;UBERON:0007245!2.32e-24!9;UBERON:0010009!2.32e-24!9;UBERON:0010011!2.32e-24!9;UBERON:0000454!2.32e-24!9;UBERON:0003076!2.62e-24!15;UBERON:0003057!2.62e-24!15;UBERON:0002308!2.74e-24!9;UBERON:0000125!2.74e-24!9;UBERON:0004111!7.63e-21!241;UBERON:0009663!3.73e-19!7;UBERON:0001894!7.00e-19!7;UBERON:0006222!7.00e-19!7;UBERON:0000200!4.60e-18!6;UBERON:0004733!1.20e-17!12;UBERON:0002028!1.20e-17!12;UBERON:0007277!1.20e-17!12;UBERON:0001871!2.88e-17!7;UBERON:0000477!2.14e-16!286;UBERON:0002298!3.81e-16!8;UBERON:0004732!3.81e-16!13;UBERON:0000483!1.00e-15!309;UBERON:0000119!1.92e-15!312;UBERON:0001872!1.06e-14!5;UBERON:0002021!1.06e-14!5;UBERON:0000349!1.36e-14!5;UBERON:0000064!1.13e-13!219;UBERON:0000369!9.97e-13!4;UBERON:0002435!9.97e-13!4;UBERON:0000204!9.97e-13!4;UBERON:0010082!9.97e-13!4;UBERON:0000475!4.61e-12!365;UBERON:0003296!7.32e-12!4;UBERON:0010133!7.32e-12!4;UBERON:0002680!3.37e-11!9;UBERON:0001895!3.37e-11!9;UBERON:0010092!3.37e-11!9;UBERON:0005383!5.15e-10!3;UBERON:0005382!5.15e-10!3;UBERON:0002771!1.06e-09!3;UBERON:0000988!1.42e-09!3;UBERON:0000062!2.41e-09!511;UBERON:0000481!4.06e-09!347;UBERON:0006331!6.57e-09!3;UBERON:0001896!1.13e-08!3;UBERON:0005290!1.13e-08!3;UBERON:0010096!1.13e-08!3;UBERON:0002240!1.19e-08!3;UBERON:0001870!2.24e-07!2;UBERON:0000922!2.79e-07!612;UBERON:0001905!3.39e-07!2;UBERON:0002757!3.39e-07!2;UBERON:0010134!3.39e-07!2;UBERON:0002784!3.39e-07!2;UBERON:0005408!3.39e-07!2;UBERON:0001899!3.39e-07!2;UBERON:0001873!3.71e-07!2;UBERON:0010122!3.71e-07!2;UBERON:0000923!5.17e-07!604;UBERON:0005291!5.17e-07!604;UBERON:0006598!5.17e-07!604;UBERON:0002532!5.17e-07!604;UBERON:0002050!5.64e-07!605;UBERON:0005423!5.64e-07!605;UBERON:0001876!6.82e-07!2;UBERON:0002148!8.10e-07!2;UBERON:0009662!8.10e-07!2;UBERON:0000467!8.54e-07!625;UBERON:0000480!9.29e-07!626 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.70e-129,56;UBERON:0005068,5.70e-129,56;UBERON:0006241,5.70e-129,56;UBERON:0007135,5.70e-129,56;UBERON:0000073,1.35e-119,53;UBERON:0002616,1.35e-119,53;UBERON:0000955,1.93e-103,68;UBERON:0006238,1.93e-103,68;UBERON:0001017,1.84e-101,81;UBERON:0002780,1.83e-97,41;UBERON:0001890,1.83e-97,41;UBERON:0003080,1.83e-97,41;UBERON:0006240,1.83e-97,41;UBERON:0001016,1.85e-90,89;UBERON:0003075,3.18e-85,82;UBERON:0007284,3.18e-85,82;UBERON:0002346,8.21e-81,86;UBERON:0003528,9.31e-81,34;UBERON:0002020,9.31e-81,34;UBERON:0001869,2.88e-80,32;UBERON:0001893,3.00e-75,34;UBERON:0002791,3.36e-74,32;UBERON:0002619,1.80e-71,22;UBERON:0010371,4.06e-65,104;UBERON:0001950,4.97e-65,20;UBERON:0003056,4.03e-63,61;UBERON:0000956,1.55e-62,25;UBERON:0000203,1.55e-62,25;UBERON:0007023,6.17e-54,114;UBERON:0010314,1.28e-51,132;UBERON:0004121,1.36e-42,171;UBERON:0000924,1.36e-42,171;UBERON:0006601,1.36e-42,171;UBERON:0011216,2.10e-36,223;UBERON:0003076,1.33e-30,15;UBERON:0003057,1.33e-30,15;UBERON:0000025,1.66e-30,192;UBERON:0001894,1.95e-23,7;UBERON:0006222,1.95e-23,7;UBERON:0000200,2.11e-22,6;UBERON:0004111,2.82e-22,240;UBERON:0004733,3.70e-22,12;UBERON:0002028,3.70e-22,12;UBERON:0007277,3.70e-22,12;UBERON:0002298,1.80e-20,6;UBERON:0004732,2.54e-20,13;UBERON:0002420,2.90e-19,9;UBERON:0007245,2.90e-19,9;UBERON:0010009,2.90e-19,9;UBERON:0010011,2.90e-19,9;UBERON:0000454,2.90e-19,9;UBERON:0000125,3.42e-19,9;UBERON:0002308,3.42e-19,9;UBERON:0001871,2.66e-18,6;UBERON:0001872,3.74e-18,5;UBERON:0002021,3.74e-18,5;UBERON:0000349,5.15e-18,5;UBERON:0000369,1.17e-15,4;UBERON:0002435,1.17e-15,4;UBERON:0000204,1.17e-15,4;UBERON:0010082,1.17e-15,4;UBERON:0000483,3.62e-15,306;UBERON:0000119,6.45e-15,309;UBERON:0003296,1.45e-14,4;UBERON:0010133,1.45e-14,4;UBERON:0002784,2.06e-14,4;UBERON:0002680,5.57e-14,9;UBERON:0001895,5.57e-14,9;UBERON:0010092,5.57e-14,9;UBERON:0009663,4.08e-13,7;UBERON:0005383,3.12e-12,3;UBERON:0005382,3.12e-12,3;UBERON:0001870,3.48e-12,3;UBERON:0000988,1.12e-11,3;UBERON:0001896,1.53e-10,3;UBERON:0005290,1.53e-10,3;UBERON:0010096,1.53e-10,3;UBERON:0002240,1.64e-10,3;UBERON:0005174,1.64e-10,3;UBERON:0001137,1.64e-10,3;UBERON:0001905,1.11e-08,2;UBERON:0002757,1.11e-08,2;UBERON:0010134,1.11e-08,2;UBERON:0005408,1.11e-08,2;UBERON:0001899,1.11e-08,2;UBERON:0001873,1.24e-08,2;UBERON:0010122,1.24e-08,2;UBERON:0002702,1.29e-08,2;UBERON:0002771,1.50e-08,2;UBERON:0001876,2.68e-08,2;UBERON:0002148,3.33e-08,2;UBERON:0006331,3.33e-08,2;UBERON:0009662,3.33e-08,2;UBERON:0001954,5.48e-08,2;UBERON:0003022,5.48e-08,2;UBERON:0002421,5.48e-08,2;UBERON:0002600,5.48e-08,2;UBERON:0000923,1.29e-07,560;UBERON:0010316,1.29e-07,560;UBERON:0005291,1.29e-07,560;UBERON:0006598,1.29e-07,560;UBERON:0010317,1.29e-07,560;UBERON:0002532,1.29e-07,560;UBERON:0000007,1.35e-07,2;UBERON:0002050,1.77e-07,564;UBERON:0001897,1.90e-07,2;UBERON:0010225,1.90e-07,2;UBERON:0000922,3.61e-07,592;UBERON:0005423,6.51e-07,581 | |||
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| ||
|short_description=p5@GABRG2 | |||
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Latest revision as of 17:38, 16 September 2015
Short description: | p5@GABRG2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABRG2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -12bp_to_ENST00000414552_5end |
EntrezGene: | GABRG2 |
HGNC: | 4087 |
UniProt: | F5HB82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data