FFCP PHASE1:Hg19::chr5:161275118..161275138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=178bp_to_ENST00000393943,NM_001127644,uc010jiy.2_5end | |association_with_transcript=178bp_to_ENST00000393943,NM_001127644,uc010jiy.2_5end | ||
|cluster_id=chr5:161275118..161275138,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_GABRA1_5end | |description=CAGE_peak_3_at_GABRA1_5end | ||
|id=chr5:161275118..161275138,+ | |id=chr5:161275118..161275138,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.14e-20;82!UBERON:0006215;3.98e-12;3!UBERON:0010122;2.42e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-82!57;UBERON:0005068!3.55e-82!57;UBERON:0006241!3.55e-82!57;UBERON:0007135!3.55e-82!57;UBERON:0005743!5.68e-81!86;UBERON:0001017!1.10e-76!82;UBERON:0000073!1.98e-74!94;UBERON:0001016!1.98e-74!94;UBERON:0002616!2.31e-72!59;UBERON:0000955!3.59e-71!69;UBERON:0006238!3.59e-71!69;UBERON:0002780!7.57e-69!41;UBERON:0001890!7.57e-69!41;UBERON:0006240!7.57e-69!41;UBERON:0003080!5.74e-67!42;UBERON:0003075!8.19e-65!86;UBERON:0007284!8.19e-65!86;UBERON:0002346!1.26e-63!90;UBERON:0001893!1.04e-58!34;UBERON:0002020!1.69e-58!34;UBERON:0003528!1.69e-58!34;UBERON:0002791!2.10e-56!33;UBERON:0001869!3.84e-55!32;UBERON:0003056!1.46e-50!61;UBERON:0002619!8.78e-47!22;UBERON:0007023!2.50e-45!115;UBERON:0000153!4.49e-43!129;UBERON:0007811!4.49e-43!129;UBERON:0001950!1.19e-42!20;UBERON:0000033!1.88e-42!123;UBERON:0000956!1.48e-40!25;UBERON:0000203!1.48e-40!25;UBERON:0000924!9.25e-39!173;UBERON:0006601!9.25e-39!173;UBERON:0004121!1.20e-38!169;UBERON:0002420!1.36e-19!9;UBERON:0007245!1.36e-19!9;UBERON:0010009!1.36e-19!9;UBERON:0010011!1.36e-19!9;UBERON:0000454!1.36e-19!9;UBERON:0002308!3.13e-19!9;UBERON:0000125!3.13e-19!9;UBERON:0000025!5.13e-19!194;UBERON:0003076!5.47e-16!15;UBERON:0003057!5.47e-16!15;UBERON:0009663!2.42e-15!7;UBERON:0000200!5.23e-15!6;UBERON:0001871!2.50e-14!7;UBERON:0004733!4.34e-14!12;UBERON:0002028!4.34e-14!12;UBERON:0007277!4.34e-14!12;UBERON:0000064!5.01e-14!219;UBERON:0004111!2.85e-13!241;UBERON:0004732!7.49e-13!13;UBERON:0002298!1.06e-12!8;UBERON:0002021!1.56e-12!5;UBERON:0001872!2.42e-12!5;UBERON:0000349!3.42e-12!5;UBERON:0000483!1.55e-11!309;UBERON:0000477!1.64e-11!286;UBERON:0000119!2.79e-11!312;UBERON:0001894!2.97e-11!7;UBERON:0006222!2.97e-11!7;UBERON:0000475!8.44e-11!365;UBERON:0000369!4.79e-10!4;UBERON:0002435!4.79e-10!4;UBERON:0000204!4.79e-10!4;UBERON:0010082!4.79e-10!4;UBERON:0002680!5.62e-09!9;UBERON:0001895!5.62e-09!9;UBERON:0010092!5.62e-09!9;UBERON:0002771!3.19e-08!3;UBERON:0005383!7.68e-08!3;UBERON:0005382!7.68e-08!3;UBERON:0000062!8.43e-08!511;UBERON:0000988!1.45e-07!3;UBERON:0000481!2.26e-07!347;UBERON:0000922!2.51e-07!612;UBERON:0001896!3.12e-07!3;UBERON:0005290!3.12e-07!3;UBERON:0010096!3.12e-07!3;UBERON:0006331!4.14e-07!3;UBERON:0002050!4.20e-07!605;UBERON:0005423!4.20e-07!605 | |ontology_enrichment_uberon=UBERON:0001049!3.55e-82!57;UBERON:0005068!3.55e-82!57;UBERON:0006241!3.55e-82!57;UBERON:0007135!3.55e-82!57;UBERON:0005743!5.68e-81!86;UBERON:0001017!1.10e-76!82;UBERON:0000073!1.98e-74!94;UBERON:0001016!1.98e-74!94;UBERON:0002616!2.31e-72!59;UBERON:0000955!3.59e-71!69;UBERON:0006238!3.59e-71!69;UBERON:0002780!7.57e-69!41;UBERON:0001890!7.57e-69!41;UBERON:0006240!7.57e-69!41;UBERON:0003080!5.74e-67!42;UBERON:0003075!8.19e-65!86;UBERON:0007284!8.19e-65!86;UBERON:0002346!1.26e-63!90;UBERON:0001893!1.04e-58!34;UBERON:0002020!1.69e-58!34;UBERON:0003528!1.69e-58!34;UBERON:0002791!2.10e-56!33;UBERON:0001869!3.84e-55!32;UBERON:0003056!1.46e-50!61;UBERON:0002619!8.78e-47!22;UBERON:0007023!2.50e-45!115;UBERON:0000153!4.49e-43!129;UBERON:0007811!4.49e-43!129;UBERON:0001950!1.19e-42!20;UBERON:0000033!1.88e-42!123;UBERON:0000956!1.48e-40!25;UBERON:0000203!1.48e-40!25;UBERON:0000924!9.25e-39!173;UBERON:0006601!9.25e-39!173;UBERON:0004121!1.20e-38!169;UBERON:0002420!1.36e-19!9;UBERON:0007245!1.36e-19!9;UBERON:0010009!1.36e-19!9;UBERON:0010011!1.36e-19!9;UBERON:0000454!1.36e-19!9;UBERON:0002308!3.13e-19!9;UBERON:0000125!3.13e-19!9;UBERON:0000025!5.13e-19!194;UBERON:0003076!5.47e-16!15;UBERON:0003057!5.47e-16!15;UBERON:0009663!2.42e-15!7;UBERON:0000200!5.23e-15!6;UBERON:0001871!2.50e-14!7;UBERON:0004733!4.34e-14!12;UBERON:0002028!4.34e-14!12;UBERON:0007277!4.34e-14!12;UBERON:0000064!5.01e-14!219;UBERON:0004111!2.85e-13!241;UBERON:0004732!7.49e-13!13;UBERON:0002298!1.06e-12!8;UBERON:0002021!1.56e-12!5;UBERON:0001872!2.42e-12!5;UBERON:0000349!3.42e-12!5;UBERON:0000483!1.55e-11!309;UBERON:0000477!1.64e-11!286;UBERON:0000119!2.79e-11!312;UBERON:0001894!2.97e-11!7;UBERON:0006222!2.97e-11!7;UBERON:0000475!8.44e-11!365;UBERON:0000369!4.79e-10!4;UBERON:0002435!4.79e-10!4;UBERON:0000204!4.79e-10!4;UBERON:0010082!4.79e-10!4;UBERON:0002680!5.62e-09!9;UBERON:0001895!5.62e-09!9;UBERON:0010092!5.62e-09!9;UBERON:0002771!3.19e-08!3;UBERON:0005383!7.68e-08!3;UBERON:0005382!7.68e-08!3;UBERON:0000062!8.43e-08!511;UBERON:0000988!1.45e-07!3;UBERON:0000481!2.26e-07!347;UBERON:0000922!2.51e-07!612;UBERON:0001896!3.12e-07!3;UBERON:0005290!3.12e-07!3;UBERON:0010096!3.12e-07!3;UBERON:0006331!4.14e-07!3;UBERON:0002050!4.20e-07!605;UBERON:0005423!4.20e-07!605 | ||
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|short_description=p3@GABRA1 | |short_description=p3@GABRA1 | ||
}} | }} |
Latest revision as of 17:20, 16 September 2015
Short description: | p3@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 178bp_to_ENST00000393943, NM_001127644, uc010jiy.2_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data