FFCP PHASE1:Hg19::chr11:125774362..125774414,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18698 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000530414_5end | |||
|cluster_id=chr11:125774362..125774414,+ | |||
|coexpression_cluster_id=C529 | |||
|description=CAGE_peak_1_at_DDX25_5end | |||
|id=chr11:125774362..125774414,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.68e-09!8;CL:0000133!3.18e-08!59;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10;CL:0000147!2.70e-07!14;CL:0000540!5.44e-07!6;CL:0000031!5.44e-07!6;CL:0000404!5.44e-07!6;CL:0002322!5.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.11e-10;6!CL:0000404;1.11e-10;6!CL:0002322;1.41e-10;5!CL:0002321;7.41e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.25e-13,8;CL:0000540,1.22e-10,6;CL:0000031,1.22e-10,6;CL:0000404,1.22e-10,6;CL:0002322,1.35e-10,5;CL:0000133,8.73e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.36e-20;82!CL:0000031;1.11e-10;6!UBERON:0006215;3.15e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.53e-57!86;UBERON:0000073!5.02e-56!94;UBERON:0001016!5.02e-56!94;UBERON:0001017!2.44e-55!82;UBERON:0001049!1.06e-52!57;UBERON:0005068!1.06e-52!57;UBERON:0006241!1.06e-52!57;UBERON:0007135!1.06e-52!57;UBERON:0002616!2.16e-45!59;UBERON:0002346!1.49e-44!90;UBERON:0003075!5.77e-43!86;UBERON:0007284!5.77e-43!86;UBERON:0000955!9.98e-43!69;UBERON:0006238!9.98e-43!69;UBERON:0002780!1.11e-41!41;UBERON:0001890!1.11e-41!41;UBERON:0006240!1.11e-41!41;UBERON:0003080!2.57e-40!42;UBERON:0007023!3.02e-37!115;UBERON:0000924!1.17e-34!173;UBERON:0006601!1.17e-34!173;UBERON:0002020!1.18e-34!34;UBERON:0003528!1.18e-34!34;UBERON:0001893!1.26e-34!34;UBERON:0002791!1.69e-33!33;UBERON:0004121!4.63e-33!169;UBERON:0001869!6.72e-33!32;UBERON:0003056!1.05e-32!61;UBERON:0000153!7.00e-28!129;UBERON:0007811!7.00e-28!129;UBERON:0000033!2.13e-26!123;UBERON:0002619!3.79e-25!22;UBERON:0000956!5.71e-25!25;UBERON:0000203!5.71e-25!25;UBERON:0001950!7.99e-23!20;UBERON:0003076!4.26e-13!15;UBERON:0003057!4.26e-13!15;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0002308!4.43e-11!9;UBERON:0000125!4.43e-11!9;UBERON:0004733!2.39e-10!12;UBERON:0002028!2.39e-10!12;UBERON:0007277!2.39e-10!12;UBERON:0004732!2.68e-09!13;UBERON:0009663!4.00e-09!7;UBERON:0001894!2.38e-08!7;UBERON:0006222!2.38e-08!7;UBERON:0000200!2.53e-08!6;UBERON:0001871!3.57e-08!7;UBERON:0000064!6.56e-08!219;UBERON:0000025!7.40e-08!194;UBERON:0002680!1.54e-07!9;UBERON:0001895!1.54e-07!9;UBERON:0010092!1.54e-07!9;UBERON:0000349!1.84e-07!5;UBERON:0001872!2.33e-07!5;UBERON:0002021!4.01e-07!5;UBERON:0002298!5.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.04e-45;41!UBERON:0001890;2.04e-45;41!UBERON:0001893;3.75e-44;34!UBERON:0003528;7.83e-44;34!UBERON:0002020;7.83e-44;34!UBERON:0001869;1.01e-43;32!UBERON:0002791;2.52e-43;32!UBERON:0000073;2.19e-42;53!UBERON:0002616;2.19e-42;53!UBERON:0002619;1.79e-41;22!UBERON:0001950;1.49e-37;20!UBERON:0000956;7.78e-36;25!UBERON:0000203;7.78e-36;25!UBERON:0001017;2.83e-31;75!UBERON:0000955;3.72e-30;68!UBERON:0001016;2.86e-28;83!UBERON:0002420;3.48e-18;9!UBERON:0007245;3.48e-18;9!UBERON:0010009;3.48e-18;9!UBERON:0010011;3.48e-18;9!UBERON:0000454;3.48e-18;9!UBERON:0000125;1.90e-17;9!UBERON:0002308;1.90e-17;9!UBERON:0009663;3.32e-14;7!UBERON:0007023;5.25e-13;114!UBERON:0000200;6.65e-13;6!UBERON:0001894;6.87e-13;7!UBERON:0004733;3.99e-12;12!UBERON:0002028;3.99e-12;12!UBERON:0000349;1.91e-11;5!UBERON:0002298;2.66e-11;6!UBERON:0001872;2.93e-11;5!UBERON:0001871;3.38e-11;6!UBERON:0004732;4.85e-11;13!UBERON:0002021;7.35e-11;5!UBERON:0011216;2.69e-10;132!UBERON:0000369;1.58e-09;4!UBERON:0002435;1.58e-09;4!UBERON:0000204;1.58e-09;4!UBERON:0003296;2.70e-08;4!UBERON:0010133;2.70e-08;4!UBERON:0002784;7.08e-08;4!UBERON:0002680;9.27e-08;9!UBERON:0001895;9.27e-08;9!UBERON:0005383;1.32e-07;3!UBERON:0005382;1.32e-07;3!UBERON:0001870;2.93e-07;3!UBERON:0010314;5.15e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-86,89;UBERON:0001017,3.61e-86,81;UBERON:0001049,1.50e-79,56;UBERON:0005068,1.50e-79,56;UBERON:0006241,1.50e-79,56;UBERON:0007135,1.50e-79,56;UBERON:0000073,1.54e-74,53;UBERON:0002616,1.54e-74,53;UBERON:0000955,2.94e-65,68;UBERON:0006238,2.94e-65,68;UBERON:0002780,1.22e-63,41;UBERON:0001890,1.22e-63,41;UBERON:0003080,1.22e-63,41;UBERON:0006240,1.22e-63,41;UBERON:0002346,4.86e-55,86;UBERON:0003075,6.84e-54,82;UBERON:0007284,6.84e-54,82;UBERON:0003528,6.75e-52,34;UBERON:0002020,6.75e-52,34;UBERON:0001893,7.52e-52,34;UBERON:0001869,6.03e-49,32;UBERON:0002791,1.68e-48,32;UBERON:0004121,3.29e-46,171;UBERON:0000924,3.29e-46,171;UBERON:0006601,3.29e-46,171;UBERON:0010371,1.54e-44,104;UBERON:0003056,2.18e-43,61;UBERON:0002619,1.89e-41,22;UBERON:0007023,1.31e-38,114;UBERON:0001950,1.52e-37,20;UBERON:0000956,8.13e-36,25;UBERON:0000203,8.13e-36,25;UBERON:0010314,4.60e-33,132;UBERON:0011216,1.18e-26,223;UBERON:0002420,3.49e-18,9;UBERON:0007245,3.49e-18,9;UBERON:0010009,3.49e-18,9;UBERON:0010011,3.49e-18,9;UBERON:0000454,3.49e-18,9;UBERON:0000125,1.86e-17,9;UBERON:0002308,1.86e-17,9;UBERON:0003076,1.49e-16,15;UBERON:0003057,1.49e-16,15;UBERON:0009663,3.43e-14,7;UBERON:0000025,8.27e-14,192;UBERON:0001894,6.68e-13,7;UBERON:0006222,6.68e-13,7;UBERON:0000200,7.44e-13,6;UBERON:0004733,3.91e-12,12;UBERON:0002028,3.91e-12,12;UBERON:0007277,3.91e-12,12;UBERON:0000349,2.01e-11,5;UBERON:0002298,2.46e-11,6;UBERON:0001872,2.99e-11,5;UBERON:0001871,3.35e-11,6;UBERON:0004732,4.76e-11,13;UBERON:0002021,7.36e-11,5;UBERON:0000369,1.67e-09,4;UBERON:0002435,1.67e-09,4;UBERON:0000204,1.67e-09,4;UBERON:0010082,1.67e-09,4;UBERON:0004111,1.86e-08,240;UBERON:0003296,2.60e-08,4;UBERON:0010133,2.60e-08,4;UBERON:0002784,7.02e-08,4;UBERON:0000922,8.54e-08,592;UBERON:0002680,9.27e-08,9;UBERON:0001895,9.27e-08,9;UBERON:0010092,9.27e-08,9;UBERON:0005383,1.32e-07,3;UBERON:0005382,1.32e-07,3;UBERON:0000483,2.34e-07,306;UBERON:0001870,2.93e-07,3;UBERON:0000119,3.71e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.221729397462564,0.175669571386252,26.0648360240448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9803994056038,16.0361019668997,21.3796854879914,11.7136992167369,14.3822884999108,7.66452454059243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.25248486685276,1.8414389344729,0.763976851116555,1.17217447210047,0,0.205654985406647,0.300343057843917,0.857479297891735,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,14.3153839243384,7.73288812777695,11.2235897774014,5.74144876487847,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,1.02580050046556,0,0.976135183992909,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98565681822056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0.296964680832639,0,31.8127247285215,21.5224207108085,0,0,3.3780065300479,0.796991953004279,0.276283915531148,8.56571342704538,0,0,0,0,0,0,0,0,0,24.2333186523805,17.2548662581043,21.9575177801314,0,0,0,0,0,0,4.82640722538051,0,0,21.2577932595321,23.63690197058,25.9388951739042,16.4763097297525,20.0972380888412,20.8416127296274,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,5.66169517037687,0,15.6957178635977,0,0,0,0,0,25.4040392153307,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,3.16373037092745,0,0,25.7674939540426,0,0,0,0,0,0,3.94668495082519,0,0,0,0,0,0,0,21.0147101048426,7.9405119757356,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,30.2187282127535,18.2512564189511,6.10861964167073,8.25236619583403,8.3088067605837,0.2249738915515,0.77380195455795,28.0055456193494,0,0.945668487590378,1.46872846777995,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,11.7844575180931,0,0,14.8675399815783,10.9753059446433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4934999592737,27.5779358678437,18.6534486752685,12.0415931094915,7.98689171065336,13.1023410206319,8.43926673111008,0,0.606596470166591,7.99302933925909,0,1.40500471742064,8.55034068803868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,17.4205629551181,0.194860308839388,0,0.327130788511688,0.982829546539238,0,0,0,0,0,0,0,0,0,6.26682419387893,4.52864207866064,5.34704202310048,1.20130602011215,0,11.0538958452875,3.09839410647505,0,0,0,0,0,0,21.0029566065423,29.7562810283728,14.3670473151436,20.7167527883163,17.6450187355203,20.4705467294085,20.9918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1937378009,28.8998896487124,22.7355476151302,20.6101383130197,17.503193888583,0,0,0.175871244359621,0,17.6781605839835,9.07966049990825,16.9950369186257,10.700122993511,0,0,0,11.6907940720151,25.3882905952597,0,0,0,30.4804244437044,0,0.913158720509496,0,0,7.00470132931232,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,1.16969731731053,0,0.713520544665411,0,0.989464650708862,15.3982100438007,0.0771741581079447,0.437119121007915,0.940634592723046,0.245148321753905,0,12.1711249611266,5.94092800654172,8.8757702792514,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,3.44014999563483,0,18.9696257632652,14.3995727812325,0.5290268405154,0,0,0,0.126166424835079,1.52971800749174,0,0.61193297845189,20.5757402054482,3.30821638325442,9.77759403240263,51.0748425990934,87.088342300758,5.80418607621146,7.55060869791835,0.426467963801962,1.90451545170992,0.193766729508018,0.31037357147929,0,1.59117895695412,2.62752345645685,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p1@DDX25 | |||
}} |
Latest revision as of 13:46, 16 September 2015
Short description: | p1@DDX25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX25_5end |
Coexpression cluster: | C529_testis_temporal_amygdala_occipital_insula_brain_putamen |
Association with transcript: | 0bp_to_ENST00000530414_5end |
EntrezGene: | DDX25 |
HGNC: | 18698 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.25e-13 | 8 |
neuron | 1.22e-10 | 6 |
neuroblast | 1.22e-10 | 6 |
electrically signaling cell | 1.22e-10 | 6 |
embryonic stem cell | 1.35e-10 | 5 |
neurectodermal cell | 8.73e-07 | 59 |