FFCP PHASE1:Hg19::chr11:124622083..124622095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23584 | |EntrezGene=23584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17149 | |HGNC=17149 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000403470_5end | |association_with_transcript=0bp_to_ENST00000403470_5end | ||
|cluster_id=chr11:124622083..124622095,- | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_1_at_VSIG2_5end | |description=CAGE_peak_1_at_VSIG2_5end | ||
|id=chr11:124622083..124622095,- | |id=chr11:124622083..124622095,- | ||
|ontology_enrichment_celltype=CL:0002368!4.32e-07!13 | |ontology_enrichment_celltype=CL:0002368!4.32e-07!13 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.16e-11;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.66e-27!169;UBERON:0000925!3.66e-27!169;UBERON:0006595!3.66e-27!169;UBERON:0001007!5.94e-22!155;UBERON:0001555!5.94e-22!155;UBERON:0007026!5.94e-22!155;UBERON:0004921!1.27e-20!129;UBERON:0004185!1.27e-20!129;UBERON:0000077!1.19e-15!130;UBERON:0007023!1.49e-13!115;UBERON:0005911!2.85e-11!82;UBERON:0001041!2.98e-10!98;UBERON:0000466!4.33e-10!126;UBERON:0000160!2.16e-09!27;UBERON:0005409!2.39e-09!35;UBERON:0001004!2.71e-09!72;UBERON:0000481!1.71e-08!347;UBERON:0003929!2.20e-08!54;UBERON:0000065!4.47e-08!53;UBERON:0000161!5.37e-08!35;UBERON:0005177!5.63e-08!107;UBERON:0003104!9.21e-08!238;UBERON:0009142!9.21e-08!238;UBERON:0000059!1.46e-07!11;UBERON:0009569!3.72e-07!113;UBERON:0000464!5.96e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!3.66e-27!169;UBERON:0000925!3.66e-27!169;UBERON:0006595!3.66e-27!169;UBERON:0001007!5.94e-22!155;UBERON:0001555!5.94e-22!155;UBERON:0007026!5.94e-22!155;UBERON:0004921!1.27e-20!129;UBERON:0004185!1.27e-20!129;UBERON:0000077!1.19e-15!130;UBERON:0007023!1.49e-13!115;UBERON:0005911!2.85e-11!82;UBERON:0001041!2.98e-10!98;UBERON:0000466!4.33e-10!126;UBERON:0000160!2.16e-09!27;UBERON:0005409!2.39e-09!35;UBERON:0001004!2.71e-09!72;UBERON:0000481!1.71e-08!347;UBERON:0003929!2.20e-08!54;UBERON:0000065!4.47e-08!53;UBERON:0000161!5.37e-08!35;UBERON:0005177!5.63e-08!107;UBERON:0003104!9.21e-08!238;UBERON:0009142!9.21e-08!238;UBERON:0000059!1.46e-07!11;UBERON:0009569!3.72e-07!113;UBERON:0000464!5.96e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.75e-16;33!UBERON:0005409;1.03e-12;22!UBERON:0000160;1.15e-12;17!UBERON:0000059;2.87e-11;11!UBERON:0000341;1.26e-10;2!UBERON:0003127;2.72e-10;2!UBERON:0001155;3.66e-09;9!UBERON:0001555;1.98e-08;54!UBERON:0002110;1.59e-07;3!UBERON:0001723;6.01e-07;3!UBERON:0001033;6.01e-07;3!UBERON:0005178;6.47e-07;34!UBERON:0002224;6.47e-07;34!UBERON:0001007;7.99e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.25e-21,145;UBERON:0001555,1.25e-21,145;UBERON:0007026,1.25e-21,145;UBERON:0004119,1.27e-20,160;UBERON:0000925,1.27e-20,160;UBERON:0006595,1.27e-20,160;UBERON:0004921,8.28e-20,118;UBERON:0000160,1.16e-12,17;UBERON:0007023,1.88e-12,114;UBERON:0000059,2.84e-11,11;UBERON:0005409,4.31e-11,25;UBERON:0000341,1.20e-10,2;UBERON:0003127,2.36e-10,2;UBERON:0001155,3.66e-09,9;UBERON:0001041,4.53e-09,87;UBERON:0011216,1.18e-08,223;UBERON:0005178,6.63e-08,34;UBERON:0002224,6.63e-08,34;UBERON:0005181,1.21e-07,35;UBERON:0002110,1.69e-07,3;UBERON:0006242,1.69e-07,3;UBERON:0000161,2.50e-07,36;UBERON:0001723,5.31e-07,3;UBERON:0001033,5.31e-07,3;UBERON:0010056,5.31e-07,3;UBERON:0000065,5.35e-07,54;UBERON:0001004,7.22e-07,74 | |||
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| ||
|short_description=p1@VSIG2 | |short_description=p1@VSIG2 | ||
}} | }} |
Latest revision as of 11:56, 16 September 2015
Short description: | p1@VSIG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSIG2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000403470_5end |
EntrezGene: | VSIG2 |
HGNC: | 17149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.25e-21 | 145 |
digestive tract | 1.25e-21 | 145 |
primitive gut | 1.25e-21 | 145 |
endoderm-derived structure | 1.27e-20 | 160 |
endoderm | 1.27e-20 | 160 |
presumptive endoderm | 1.27e-20 | 160 |
subdivision of digestive tract | 8.28e-20 | 118 |
intestine | 1.16e-12 | 17 |
adult organism | 1.88e-12 | 114 |
large intestine | 2.84e-11 | 11 |
gastrointestinal system | 4.31e-11 | 25 |
throat | 1.20e-10 | 2 |
open tracheal system trachea | 2.36e-10 | 2 |
colon | 3.66e-09 | 9 |
foregut | 4.53e-09 | 87 |
organ system subdivision | 1.18e-08 | 223 |
thoracic cavity element | 6.63e-08 | 34 |
thoracic cavity | 6.63e-08 | 34 |
thoracic segment organ | 1.21e-07 | 35 |
gallbladder | 1.69e-07 | 3 |
gall bladder primordium | 1.69e-07 | 3 |
orifice | 2.50e-07 | 36 |
tongue | 5.31e-07 | 3 |
gustatory system | 5.31e-07 | 3 |
future tongue | 5.31e-07 | 3 |
respiratory tract | 5.35e-07 | 54 |
respiratory system | 7.22e-07 | 74 |