FFCP PHASE1:Hg19::chr20:42187700..42187724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10110 | |EntrezGene=10110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13900 | |HGNC=13900 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000373077_5end | |association_with_transcript=6bp_to_ENST00000373077_5end | ||
|cluster_id=chr20:42187700..42187724,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_1_at_SGK2_5end | |description=CAGE_peak_1_at_SGK2_5end | ||
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|ontology_enrichment_celltype=CL:1000497!2.75e-13!18;CL:0002518!2.75e-13!18;CL:1000507!1.43e-12!12;CL:1000494!1.43e-12!12;CL:1000449!1.40e-10!16;CL:0000181!9.53e-09!12;CL:0000417!9.53e-09!12;CL:0000668!9.53e-09!12;CL:0000414!9.53e-09!12;CL:0000412!9.53e-09!12;CL:0000182!9.53e-09!12;CL:0000136!3.87e-08!15;CL:0002681!3.31e-07!13;CL:0002584!3.31e-07!13 | |ontology_enrichment_celltype=CL:1000497!2.75e-13!18;CL:0002518!2.75e-13!18;CL:1000507!1.43e-12!12;CL:1000494!1.43e-12!12;CL:1000449!1.40e-10!16;CL:0000181!9.53e-09!12;CL:0000417!9.53e-09!12;CL:0000668!9.53e-09!12;CL:0000414!9.53e-09!12;CL:0000412!9.53e-09!12;CL:0000182!9.53e-09!12;CL:0000136!3.87e-08!15;CL:0002681!3.31e-07!13;CL:0002584!3.31e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.42e-16;10!CL:1000494;1.42e-16;10!CL:1000497;1.30e-14;17!CL:0002518;1.30e-14;17!CL:0000182;1.33e-14;12!CL:1000449;1.35e-10;15!CL:0000239;2.42e-09;3!CL:1000615;2.42e-09;3!CL:0002306;2.42e-09;3!CL:0000136;4.47e-08;13!CL:0002681;7.01e-08;12!CL:0002584;7.01e-08;12 | |ontology_enrichment_celltype_v019=CL:1000507;1.42e-16;10!CL:1000494;1.42e-16;10!CL:1000497;1.30e-14;17!CL:0002518;1.30e-14;17!CL:0000182;1.33e-14;12!CL:1000449;1.35e-10;15!CL:0000239;2.42e-09;3!CL:1000615;2.42e-09;3!CL:0002306;2.42e-09;3!CL:0000136;4.47e-08;13!CL:0002681;7.01e-08;12!CL:0002584;7.01e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.31e-16,10;CL:1000494,1.31e-16,10;CL:1000497,1.17e-14,17;CL:0002518,1.17e-14,17;CL:0000182,1.45e-14,12;CL:1000449,1.28e-10,15;CL:0000239,1.98e-09,3;CL:1000615,1.98e-09,3;CL:0002306,1.98e-09,3;CL:0002681,6.74e-08,12;CL:0002584,6.74e-08,12;CL:0000223,1.09e-07,58;CL:0000136,6.89e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.30e-16;13!UBERON:0004161;8.06e-16;11!UBERON:0003104;3.39e-15;31!UBERON:0001041;1.61e-07;30 | |ontology_enrichment_development_v019=UBERON:0009497;1.30e-16;13!UBERON:0004161;8.06e-16;11!UBERON:0003104;3.39e-15;31!UBERON:0001041;1.61e-07;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:299;8.88e-08;25 | |ontology_enrichment_disease_v019=DOID:299;8.88e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,8.57e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.24e-22!55;UBERON:0005173!5.24e-22!55;UBERON:0002417!8.24e-22!61;UBERON:0000916!8.24e-22!61;UBERON:0007023!1.15e-18!115;UBERON:0005177!3.34e-15!107;UBERON:0000466!4.33e-15!126;UBERON:0002113!1.90e-14!27;UBERON:0003918!1.90e-14!27;UBERON:0005095!1.90e-14!27;UBERON:0007687!1.90e-14!27;UBERON:0000489!2.41e-14!32;UBERON:0009569!8.10e-14!113;UBERON:0004876!3.27e-13!20;UBERON:0000080!5.10e-13!18;UBERON:0002120!5.10e-13!18;UBERON:0004875!5.10e-13!18;UBERON:0005721!5.10e-13!18;UBERON:0005754!5.10e-13!18;UBERON:0007297!5.10e-13!18;UBERON:0000058!1.35e-12!26;UBERON:0009773!1.43e-12!12;UBERON:0001231!1.43e-12!12;UBERON:0004810!1.43e-12!12;UBERON:0006554!1.46e-12!44;UBERON:0004921!1.76e-12!129;UBERON:0004185!1.76e-12!129;UBERON:0003887!3.05e-12!21;UBERON:0001008!3.83e-12!45;UBERON:0006555!5.61e-12!17;UBERON:0005103!5.61e-12!17;UBERON:0000083!5.61e-12!17;UBERON:0009201!5.61e-12!17;UBERON:0004819!5.61e-12!17;UBERON:0006553!5.61e-12!17;UBERON:0003074!5.61e-12!17;UBERON:0003060!5.61e-12!17;UBERON:0003103!5.81e-12!69;UBERON:0009856!6.82e-12!26;UBERON:0002553!1.01e-11!70;UBERON:0000481!1.11e-11!347;UBERON:0003104!4.50e-11!238;UBERON:0009142!4.50e-11!238;UBERON:0009497!5.39e-11!25;UBERON:0000015!5.39e-11!25;UBERON:0002423!5.39e-11!25;UBERON:0006235!5.39e-11!25;UBERON:0004161!5.39e-11!25;UBERON:0003064!6.94e-11!37;UBERON:0007499!9.91e-11!25;UBERON:0004211!1.40e-10!16;UBERON:0001285!1.40e-10!16;UBERON:0007684!1.40e-10!16;UBERON:0003220!1.40e-10!16;UBERON:0004208!1.40e-10!16;UBERON:0001007!1.48e-10!155;UBERON:0001555!1.48e-10!155;UBERON:0007026!1.48e-10!155;UBERON:0009854!1.86e-10!23;UBERON:0003886!1.22e-09!63;UBERON:0002107!2.27e-09!19;UBERON:0006925!2.27e-09!19;UBERON:0008836!2.27e-09!19;UBERON:0008835!2.62e-09!22;UBERON:0003894!2.62e-09!22;UBERON:0004119!2.80e-09!169;UBERON:0000925!2.80e-09!169;UBERON:0006595!2.80e-09!169;UBERON:0000077!4.12e-09!130;UBERON:0002365!4.57e-09!31;UBERON:0002330!4.57e-09!31;UBERON:0000464!1.10e-08!104;UBERON:0004111!1.22e-08!241;UBERON:0005409!1.77e-08!35;UBERON:0003929!2.02e-08!54;UBERON:0005057!2.70e-08!26;UBERON:0002100!3.39e-08!216;UBERON:0002530!9.40e-08!59;UBERON:0000062!1.11e-07!511;UBERON:0003914!2.29e-07!118;UBERON:0001225!3.31e-07!13;UBERON:0008987!3.31e-07!13;UBERON:0000025!3.95e-07!194;UBERON:0000477!4.22e-07!286 | |ontology_enrichment_uberon=UBERON:0005172!5.24e-22!55;UBERON:0005173!5.24e-22!55;UBERON:0002417!8.24e-22!61;UBERON:0000916!8.24e-22!61;UBERON:0007023!1.15e-18!115;UBERON:0005177!3.34e-15!107;UBERON:0000466!4.33e-15!126;UBERON:0002113!1.90e-14!27;UBERON:0003918!1.90e-14!27;UBERON:0005095!1.90e-14!27;UBERON:0007687!1.90e-14!27;UBERON:0000489!2.41e-14!32;UBERON:0009569!8.10e-14!113;UBERON:0004876!3.27e-13!20;UBERON:0000080!5.10e-13!18;UBERON:0002120!5.10e-13!18;UBERON:0004875!5.10e-13!18;UBERON:0005721!5.10e-13!18;UBERON:0005754!5.10e-13!18;UBERON:0007297!5.10e-13!18;UBERON:0000058!1.35e-12!26;UBERON:0009773!1.43e-12!12;UBERON:0001231!1.43e-12!12;UBERON:0004810!1.43e-12!12;UBERON:0006554!1.46e-12!44;UBERON:0004921!1.76e-12!129;UBERON:0004185!1.76e-12!129;UBERON:0003887!3.05e-12!21;UBERON:0001008!3.83e-12!45;UBERON:0006555!5.61e-12!17;UBERON:0005103!5.61e-12!17;UBERON:0000083!5.61e-12!17;UBERON:0009201!5.61e-12!17;UBERON:0004819!5.61e-12!17;UBERON:0006553!5.61e-12!17;UBERON:0003074!5.61e-12!17;UBERON:0003060!5.61e-12!17;UBERON:0003103!5.81e-12!69;UBERON:0009856!6.82e-12!26;UBERON:0002553!1.01e-11!70;UBERON:0000481!1.11e-11!347;UBERON:0003104!4.50e-11!238;UBERON:0009142!4.50e-11!238;UBERON:0009497!5.39e-11!25;UBERON:0000015!5.39e-11!25;UBERON:0002423!5.39e-11!25;UBERON:0006235!5.39e-11!25;UBERON:0004161!5.39e-11!25;UBERON:0003064!6.94e-11!37;UBERON:0007499!9.91e-11!25;UBERON:0004211!1.40e-10!16;UBERON:0001285!1.40e-10!16;UBERON:0007684!1.40e-10!16;UBERON:0003220!1.40e-10!16;UBERON:0004208!1.40e-10!16;UBERON:0001007!1.48e-10!155;UBERON:0001555!1.48e-10!155;UBERON:0007026!1.48e-10!155;UBERON:0009854!1.86e-10!23;UBERON:0003886!1.22e-09!63;UBERON:0002107!2.27e-09!19;UBERON:0006925!2.27e-09!19;UBERON:0008836!2.27e-09!19;UBERON:0008835!2.62e-09!22;UBERON:0003894!2.62e-09!22;UBERON:0004119!2.80e-09!169;UBERON:0000925!2.80e-09!169;UBERON:0006595!2.80e-09!169;UBERON:0000077!4.12e-09!130;UBERON:0002365!4.57e-09!31;UBERON:0002330!4.57e-09!31;UBERON:0000464!1.10e-08!104;UBERON:0004111!1.22e-08!241;UBERON:0005409!1.77e-08!35;UBERON:0003929!2.02e-08!54;UBERON:0005057!2.70e-08!26;UBERON:0002100!3.39e-08!216;UBERON:0002530!9.40e-08!59;UBERON:0000062!1.11e-07!511;UBERON:0003914!2.29e-07!118;UBERON:0001225!3.31e-07!13;UBERON:0008987!3.31e-07!13;UBERON:0000025!3.95e-07!194;UBERON:0000477!4.22e-07!286 | ||
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|short_description=p1@SGK2 | |short_description=p1@SGK2 | ||
}} | }} |
Latest revision as of 06:51, 16 September 2015
Short description: | p1@SGK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGK2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 6bp_to_ENST00000373077_5end |
EntrezGene: | SGK2 |
HGNC: | 13900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.31e-16 | 10 |
nephron tubule epithelial cell | 1.31e-16 | 10 |
kidney cell | 1.17e-14 | 17 |
kidney epithelial cell | 1.17e-14 | 17 |
hepatocyte | 1.45e-14 | 12 |
epithelial cell of nephron | 1.28e-10 | 15 |
brush border epithelial cell | 1.98e-09 | 3 |
kidney cortex tubule cell | 1.98e-09 | 3 |
epithelial cell of proximal tubule | 1.98e-09 | 3 |
kidney cortical cell | 6.74e-08 | 12 |
renal cortical epithelial cell | 6.74e-08 | 12 |
endodermal cell | 1.09e-07 | 58 |
fat cell | 6.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.57e-08 | 25 |