FFCP PHASE1:Hg19::chr16:30042190..30042203,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83723 | |EntrezGene=83723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25295 | |HGNC=25295 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0F5,Q71RH2 | |UniProt=F1T0F5,Q71RH2 | ||
|association_with_transcript=0bp_to_ENST00000380495_5end | |association_with_transcript=0bp_to_ENST00000380495_5end | ||
|cluster_id=chr16:30042190..30042203,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_FAM57B_5end | |description=CAGE_peak_4_at_FAM57B_5end | ||
|id=chr16:30042190..30042203,- | |id=chr16:30042190..30042203,- | ||
|ontology_enrichment_celltype=CL:0000047!4.50e-15!8;CL:0002319!2.46e-12!25;CL:0000540!6.10e-12!6;CL:0000031!6.10e-12!6;CL:0000404!6.10e-12!6;CL:0002322!9.29e-10!5;CL:0000133!3.23e-09!59;CL:0000221!8.68e-07!71 | |ontology_enrichment_celltype=CL:0000047!4.50e-15!8;CL:0002319!2.46e-12!25;CL:0000540!6.10e-12!6;CL:0000031!6.10e-12!6;CL:0000404!6.10e-12!6;CL:0002322!9.29e-10!5;CL:0000133!3.23e-09!59;CL:0000221!8.68e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.18e-16;6!CL:0000404;1.18e-16;6!CL:0002322;4.19e-13;5!CL:0002319;1.19e-10;25!CL:0002321;1.31e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.51e-17,8;CL:0000540,7.92e-17,6;CL:0000031,7.92e-17,6;CL:0000404,7.92e-17,6;CL:0002322,1.29e-13,5;CL:0002319,1.02e-10,25;CL:0000133,2.33e-09,59;CL:0000221,5.12e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.18e-16;6!UBERON:0006601;2.19e-13;82!UBERON:0006215;2.20e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;6.27e-07;4 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.12e-78!82;UBERON:0005743!4.35e-76!86;UBERON:0000073!2.85e-75!94;UBERON:0001016!2.85e-75!94;UBERON:0001049!4.46e-64!57;UBERON:0005068!4.46e-64!57;UBERON:0006241!4.46e-64!57;UBERON:0007135!4.46e-64!57;UBERON:0000955!4.18e-57!69;UBERON:0006238!4.18e-57!69;UBERON:0002616!4.80e-53!59;UBERON:0002780!1.91e-47!41;UBERON:0001890!1.91e-47!41;UBERON:0006240!1.91e-47!41;UBERON:0003075!4.32e-47!86;UBERON:0007284!4.32e-47!86;UBERON:0002346!2.80e-46!90;UBERON:0003080!4.53e-46!42;UBERON:0000924!1.78e-40!173;UBERON:0006601!1.78e-40!173;UBERON:0004121!1.84e-40!169;UBERON:0002020!7.78e-37!34;UBERON:0003528!7.78e-37!34;UBERON:0001893!1.42e-36!34;UBERON:0002791!4.22e-35!33;UBERON:0003056!2.13e-34!61;UBERON:0001869!4.15e-34!32;UBERON:0000153!5.08e-34!129;UBERON:0007811!5.08e-34!129;UBERON:0000033!2.44e-32!123;UBERON:0002619!1.26e-31!22;UBERON:0007023!1.11e-30!115;UBERON:0000956!9.42e-30!25;UBERON:0000203!9.42e-30!25;UBERON:0001950!7.96e-29!20;UBERON:0003076!2.15e-18!15;UBERON:0003057!2.15e-18!15;UBERON:0004733!7.64e-14!12;UBERON:0002028!7.64e-14!12;UBERON:0007277!7.64e-14!12;UBERON:0000025!2.52e-13!194;UBERON:0004732!1.36e-12!13;UBERON:0001894!1.93e-12!7;UBERON:0006222!1.93e-12!7;UBERON:0000200!1.98e-11!6;UBERON:0001871!2.64e-11!7;UBERON:0002298!2.86e-10!8;UBERON:0001872!8.01e-10!5;UBERON:0004111!1.02e-09!241;UBERON:0002680!2.09e-09!9;UBERON:0001895!2.09e-09!9;UBERON:0010092!2.09e-09!9;UBERON:0000349!8.58e-09!5;UBERON:0002420!9.95e-09!9;UBERON:0007245!9.95e-09!9;UBERON:0010009!9.95e-09!9;UBERON:0010011!9.95e-09!9;UBERON:0000454!9.95e-09!9;UBERON:0002308!1.37e-08!9;UBERON:0000125!1.37e-08!9;UBERON:0000475!1.66e-08!365;UBERON:0000922!1.93e-08!612;UBERON:0003296!4.24e-08!4;UBERON:0010133!4.24e-08!4;UBERON:0000064!7.39e-08!219;UBERON:0000477!2.01e-07!286;UBERON:0000468!2.19e-07!659;UBERON:0000483!3.16e-07!309;UBERON:0000119!5.07e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.74e-38;22!UBERON:0001950;5.53e-38;20!UBERON:0000956;2.88e-33;25!UBERON:0000203;2.88e-33;25!UBERON:0000073;3.42e-30;53!UBERON:0002616;3.42e-30;53!UBERON:0001869;6.05e-30;32!UBERON:0002780;1.54e-27;41!UBERON:0001890;1.54e-27;41!UBERON:0002791;1.89e-27;32!UBERON:0003528;2.04e-27;34!UBERON:0002020;2.04e-27;34!UBERON:0001893;2.28e-27;34!UBERON:0000955;1.93e-24;68!UBERON:0001016;5.12e-21;83!UBERON:0001017;8.83e-21;75!UBERON:0000200;1.13e-15;6!UBERON:0001871;9.48e-14;6!UBERON:0001872;1.05e-13;5!UBERON:0004733;2.28e-13;12!UBERON:0002028;2.28e-13;12!UBERON:0004732;3.13e-12;13!UBERON:0002298;7.19e-11;6!UBERON:0001894;8.73e-10;7!UBERON:0001896;1.56e-08;3!UBERON:0001870;1.56e-08;3!UBERON:0005290;1.56e-08;3!UBERON:0011216;2.24e-08;132!UBERON:0002680;1.41e-07;9!UBERON:0001895;1.41e-07;9!UBERON:0003296;4.74e-07;4!UBERON:0010133;4.74e-07;4!UBERON:0002784;4.74e-07;4!UBERON:0001905;5.35e-07;2!UBERON:0002757;5.35e-07;2!UBERON:0010134;5.35e-07;2!UBERON:0005408;5.35e-07;2!UBERON:0001899;5.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.78e-67,89;UBERON:0001017,2.40e-65,81;UBERON:0001049,4.50e-56,56;UBERON:0005068,4.50e-56,56;UBERON:0006241,4.50e-56,56;UBERON:0007135,4.50e-56,56;UBERON:0000073,8.64e-53,53;UBERON:0002616,8.64e-53,53;UBERON:0000955,1.03e-49,68;UBERON:0006238,1.03e-49,68;UBERON:0002780,2.97e-40,41;UBERON:0001890,2.97e-40,41;UBERON:0003080,2.97e-40,41;UBERON:0006240,2.97e-40,41;UBERON:0003075,5.72e-40,82;UBERON:0007284,5.72e-40,82;UBERON:0002346,8.16e-40,86;UBERON:0002619,3.06e-38,22;UBERON:0001950,4.64e-38,20;UBERON:0004121,8.90e-37,171;UBERON:0000924,8.90e-37,171;UBERON:0006601,8.90e-37,171;UBERON:0001869,4.35e-34,32;UBERON:0000956,3.17e-33,25;UBERON:0000203,3.17e-33,25;UBERON:0010371,3.19e-33,104;UBERON:0003528,5.87e-32,34;UBERON:0002020,5.87e-32,34;UBERON:0001893,8.58e-32,34;UBERON:0002791,5.85e-31,32;UBERON:0003056,2.53e-29,61;UBERON:0011216,1.01e-27,223;UBERON:0010314,7.74e-24,132;UBERON:0007023,1.74e-19,114;UBERON:0003076,2.15e-16,15;UBERON:0003057,2.15e-16,15;UBERON:0000200,4.48e-16,6;UBERON:0001871,9.51e-14,6;UBERON:0001872,1.03e-13,5;UBERON:0004733,2.32e-13,12;UBERON:0002028,2.32e-13,12;UBERON:0007277,2.32e-13,12;UBERON:0000025,3.31e-13,192;UBERON:0004732,3.17e-12,13;UBERON:0002298,7.19e-11,6;UBERON:0001894,6.55e-10,7;UBERON:0006222,6.55e-10,7;UBERON:0004111,2.67e-09,240;UBERON:0001870,1.35e-08,3;UBERON:0001896,1.55e-08,3;UBERON:0005290,1.55e-08,3;UBERON:0010096,1.55e-08,3;UBERON:0002680,1.43e-07,9;UBERON:0001895,1.43e-07,9;UBERON:0010092,1.43e-07,9;UBERON:0000922,3.71e-07,592;UBERON:0002784,4.08e-07,4;UBERON:0003296,4.35e-07,4;UBERON:0010133,4.35e-07,4;UBERON:0001905,5.23e-07,2;UBERON:0002757,5.23e-07,2;UBERON:0010134,5.23e-07,2;UBERON:0005408,5.23e-07,2;UBERON:0001899,5.23e-07,2;UBERON:0000483,6.55e-07,306;UBERON:0000119,9.51e-07,309;UBERON:0002771,9.86e-07,2 | |||
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|short_description=p4@FAM57B | |short_description=p4@FAM57B | ||
}} | }} |
Latest revision as of 05:41, 16 September 2015
Short description: | p4@FAM57B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM57B_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000380495_5end |
EntrezGene: | FAM57B |
HGNC: | 25295 |
UniProt: | F1T0F5Q71RH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.51e-17 | 8 |
neuron | 7.92e-17 | 6 |
neuroblast | 7.92e-17 | 6 |
electrically signaling cell | 7.92e-17 | 6 |
embryonic stem cell | 1.29e-13 | 5 |
neural cell | 1.02e-10 | 25 |
neurectodermal cell | 2.33e-09 | 59 |
ectodermal cell | 5.12e-07 | 72 |