FFCP PHASE1:Hg19::chr2:105470599..105470610,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:105470599..105470610,+ to FFCP PHASE1:Hg19::chr2:105470599..105470610,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
| | |EntrezGene=5455 | ||
| | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:105470599..105470610,+ | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_6_at_POU3F3_5end | |||
|id=chr2:105470599..105470610,+ | |||
|ontology_enrichment_celltype=CL:0000128!3.79e-09!7;CL:0000126!3.79e-09!7;CL:0000127!3.79e-09!7;CL:0002453!3.79e-09!7;CL:0002319!9.77e-09!25;CL:1000507!1.83e-07!12;CL:1000494!1.83e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000128;9.71e-13;7!CL:0000126;9.71e-13;7!CL:0000127;9.71e-13;7!CL:0002319;7.33e-10;25!CL:0002605;9.94e-09;3!CL:0002603;5.95e-08;3!CL:1000507;1.01e-07;10!CL:1000494;1.01e-07;10!CL:0000239;2.12e-07;3!CL:1000615;2.12e-07;3!CL:0002306;2.12e-07;3!CL:0000047;5.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.30e-13,7;CL:0000126,8.30e-13,7;CL:0000127,8.30e-13,7;CL:0002453,8.30e-13,7;CL:0002319,7.07e-10,25;CL:0000047,4.78e-09,8;CL:0002605,8.19e-09,3;CL:0002603,5.96e-08,3;CL:1000507,9.75e-08,10;CL:1000494,9.75e-08,10;CL:0000239,2.00e-07,3;CL:1000615,2.00e-07,3;CL:0002306,2.00e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.49e-13;82!UBERON:0006241;9.49e-08;3!UBERON:0003057;9.49e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-64;34!UBERON:0003528;2.86e-62;34!UBERON:0002020;2.86e-62;34!UBERON:0002791;3.90e-62;32!UBERON:0001869;4.20e-62;32!UBERON:0000956;1.74e-53;25!UBERON:0000203;1.74e-53;25!UBERON:0002780;4.94e-52;41!UBERON:0001890;4.94e-52;41!UBERON:0000073;1.69e-49;53!UBERON:0002616;1.69e-49;53!UBERON:0002619;2.52e-46;22!UBERON:0001950;9.59e-42;20!UBERON:0001017;1.36e-33;75!UBERON:0000955;4.12e-32;68!UBERON:0001016;1.02e-29;83!UBERON:0002420;1.96e-21;9!UBERON:0007245;1.96e-21;9!UBERON:0010009;1.96e-21;9!UBERON:0010011;1.96e-21;9!UBERON:0000454;1.96e-21;9!UBERON:0000125;2.95e-21;9!UBERON:0002308;2.95e-21;9!UBERON:0004732;1.24e-20;13!UBERON:0004733;1.15e-18;12!UBERON:0002028;1.15e-18;12!UBERON:0009663;4.78e-17;7!UBERON:0002680;3.29e-16;9!UBERON:0001895;3.29e-16;9!UBERON:0002021;6.19e-14;5!UBERON:0001872;1.51e-13;5!UBERON:0001871;5.28e-13;6!UBERON:0007023;6.16e-13;114!UBERON:0000349;8.17e-13;5!UBERON:0000200;6.17e-11;6!UBERON:0002298;1.56e-10;6!UBERON:0000369;4.02e-10;4!UBERON:0002435;4.02e-10;4!UBERON:0000204;4.02e-10;4!UBERON:0011216;4.20e-10;132!UBERON:0002037;8.41e-10;6!UBERON:0000489;2.37e-09;29!UBERON:0000988;2.74e-08;3!UBERON:0006947;2.96e-08;3!UBERON:0004054;2.96e-08;3!UBERON:0010314;5.62e-08;132!UBERON:0005383;6.65e-08;3!UBERON:0005382;6.65e-08;3!UBERON:0002240;9.49e-08;3!UBERON:0005174;9.49e-08;3!UBERON:0001137;9.49e-08;3!UBERON:0004211;1.01e-07;10!UBERON:0009773;1.01e-07;10!UBERON:0001231;1.01e-07;10!UBERON:0004810;1.01e-07;10!UBERON:0006853;2.12e-07;3!UBERON:0007685;2.12e-07;3!UBERON:0004134;2.12e-07;3 | |||
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| ||
|short_description=p6@POU3F3 | |||
}} | }} |
Latest revision as of 04:05, 16 September 2015
Short description: | p6@POU3F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_POU3F3_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | POU3F3 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.30e-13 | 7 |
macroglial cell | 8.30e-13 | 7 |
astrocyte | 8.30e-13 | 7 |
oligodendrocyte precursor cell | 8.30e-13 | 7 |
neural cell | 7.07e-10 | 25 |
neuronal stem cell | 4.78e-09 | 8 |
astrocyte of the cerebral cortex | 8.19e-09 | 3 |
astrocyte of the cerebellum | 5.96e-08 | 3 |
kidney tubule cell | 9.75e-08 | 10 |
nephron tubule epithelial cell | 9.75e-08 | 10 |
brush border epithelial cell | 2.00e-07 | 3 |
kidney cortex tubule cell | 2.00e-07 | 3 |
epithelial cell of proximal tubule | 2.00e-07 | 3 |