FFCP PHASE1:Hg19::chr11:117695415..117695426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000533281_5end | |||
|cluster_id=chr11:117695415..117695426,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_FXYD2_5end | |||
|id=chr11:117695415..117695426,- | |||
|ontology_enrichment_celltype=CL:1000497!7.25e-39!18;CL:0002518!7.25e-39!18;CL:1000507!9.48e-37!12;CL:1000494!9.48e-37!12;CL:1000449!3.48e-32!16;CL:0002681!2.05e-22!13;CL:0002584!2.05e-22!13;CL:0000239!9.07e-13!3;CL:1000615!9.07e-13!3;CL:0002306!9.07e-13!3;CL:0000650!9.68e-12!3;CL:1000618!9.68e-12!3;CL:1001318!9.68e-12!3;CL:0002173!9.68e-12!3;CL:1000500!9.68e-12!3;CL:1000612!9.72e-09!7;CL:1000746!9.72e-09!7;CL:0000669!3.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000497;9.51e-43;17!CL:0002518;9.51e-43;17!CL:1000507;1.34e-36;10!CL:1000494;1.34e-36;10!CL:1000449;2.60e-31;15!CL:0000239;7.31e-24;3!CL:1000615;7.31e-24;3!CL:0002306;7.31e-24;3!CL:0002681;2.50e-22;12!CL:0002584;2.50e-22;12!CL:0002581;5.11e-09;1!CL:0002616;8.49e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.11e-42,17;CL:0002518,1.11e-42,17;CL:1000507,1.71e-36,10;CL:1000494,1.71e-36,10;CL:1000449,2.99e-31,15;CL:0000239,7.91e-24,3;CL:1000615,7.91e-24,3;CL:0002306,7.91e-24,3;CL:0002681,2.75e-22,12;CL:0002584,2.75e-22,12;CL:0002581,4.54e-09,1;CL:0002616,7.85e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.11e-12;10!UBERON:0007687;1.11e-12;10!UBERON:0006242;2.04e-09;1!UBERON:0003104;1.13e-08;31 | |||
|ontology_enrichment_disease=DOID:4468!5.86e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.57e-37!27;UBERON:0003918!1.57e-37!27;UBERON:0005095!1.57e-37!27;UBERON:0007687!1.57e-37!27;UBERON:0009773!9.48e-37!12;UBERON:0001231!9.48e-37!12;UBERON:0004810!9.48e-37!12;UBERON:0006555!2.26e-35!17;UBERON:0005103!2.26e-35!17;UBERON:0000083!2.26e-35!17;UBERON:0009201!2.26e-35!17;UBERON:0004819!2.26e-35!17;UBERON:0006553!2.26e-35!17;UBERON:0003074!2.26e-35!17;UBERON:0003060!2.26e-35!17;UBERON:0000080!3.08e-33!18;UBERON:0002120!3.08e-33!18;UBERON:0004875!3.08e-33!18;UBERON:0005721!3.08e-33!18;UBERON:0005754!3.08e-33!18;UBERON:0007297!3.08e-33!18;UBERON:0004211!3.48e-32!16;UBERON:0001285!3.48e-32!16;UBERON:0007684!3.48e-32!16;UBERON:0003220!3.48e-32!16;UBERON:0004208!3.48e-32!16;UBERON:0005172!2.22e-31!55;UBERON:0005173!2.22e-31!55;UBERON:0000489!5.44e-31!32;UBERON:0004876!1.31e-29!20;UBERON:0003887!4.71e-28!21;UBERON:0002417!1.04e-27!61;UBERON:0000916!1.04e-27!61;UBERON:0001225!2.05e-22!13;UBERON:0008987!2.05e-22!13;UBERON:0000058!4.49e-22!26;UBERON:0006554!2.26e-21!44;UBERON:0001008!8.40e-21!45;UBERON:0001851!6.84e-18!16;UBERON:0005177!6.87e-18!107;UBERON:0000353!9.72e-17!17;UBERON:0003064!1.27e-14!37;UBERON:0009569!1.02e-13!113;UBERON:0003886!1.70e-13!63;UBERON:0006853!9.07e-13!3;UBERON:0007685!9.07e-13!3;UBERON:0004134!9.07e-13!3;UBERON:0003103!3.96e-12!69;UBERON:0002553!9.61e-12!70;UBERON:0003567!9.68e-12!3;UBERON:0003838!9.68e-12!3;UBERON:0005169!9.68e-12!3;UBERON:0002321!9.68e-12!3;UBERON:0005215!9.68e-12!3;UBERON:0002303!9.68e-12!3;UBERON:0002319!9.68e-12!3;UBERON:0000466!2.26e-10!126;UBERON:0005406!6.33e-09!2;UBERON:0000074!9.72e-09!7;UBERON:0001229!9.72e-09!7;UBERON:0001230!9.72e-09!7;UBERON:0005749!9.72e-09!7;UBERON:0004199!9.72e-09!7;UBERON:0004209!9.72e-09!7;UBERON:0004198!9.72e-09!7;UBERON:0003914!4.74e-08!118;UBERON:0000464!1.09e-07!104;UBERON:0003891!3.24e-07!5;UBERON:0003586!3.24e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.14e-43;24!UBERON:0011143;1.14e-43;24!UBERON:0004211;1.34e-36;10!UBERON:0009773;1.34e-36;10!UBERON:0001231;1.34e-36;10!UBERON:0004810;1.34e-36;10!UBERON:0000489;8.55e-36;29!UBERON:0006554;1.56e-34;30!UBERON:0001008;1.56e-34;30!UBERON:0006555;2.60e-31;15!UBERON:0004819;2.60e-31;15!UBERON:0001285;2.60e-31;15!UBERON:0007684;2.60e-31;15!UBERON:0006853;7.31e-24;3!UBERON:0007685;7.31e-24;3!UBERON:0004134;7.31e-24;3!UBERON:0001225;2.50e-22;12!UBERON:0008987;2.50e-22;12!UBERON:0005172;5.86e-19;52!UBERON:0005173;5.86e-19;52!UBERON:0001851;8.79e-18;15!UBERON:0000353;8.79e-18;15!UBERON:0005406;4.24e-16;2!UBERON:0002417;1.16e-13;58!UBERON:0000916;1.16e-13;58!UBERON:0003103;9.64e-09;61!UBERON:0005177;1.13e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.21e-40,26;UBERON:0003918,4.21e-40,26;UBERON:0011143,4.21e-40,26;UBERON:0005095,4.21e-40,26;UBERON:0007687,4.21e-40,26;UBERON:0004810,1.71e-36,10;UBERON:0000489,2.61e-33,31;UBERON:0004211,2.99e-31,15;UBERON:0009773,2.99e-31,15;UBERON:0001231,2.99e-31,15;UBERON:0001285,2.99e-31,15;UBERON:0007684,2.99e-31,15;UBERON:0004208,2.99e-31,15;UBERON:0006555,3.08e-29,16;UBERON:0004819,3.08e-29,16;UBERON:0005172,2.76e-25,54;UBERON:0005173,2.76e-25,54;UBERON:0006853,7.91e-24,3;UBERON:0007685,7.91e-24,3;UBERON:0004134,7.91e-24,3;UBERON:0002417,1.66e-22,60;UBERON:0000916,1.66e-22,60;UBERON:0001225,2.75e-22,12;UBERON:0008987,2.75e-22,12;UBERON:0006554,2.84e-21,47;UBERON:0001008,8.70e-21,48;UBERON:0001851,9.47e-18,15;UBERON:0000353,9.47e-18,15;UBERON:0005177,1.35e-16,101;UBERON:0005406,3.49e-16,2;UBERON:0003103,4.63e-14,68;UBERON:0009569,1.05e-12,112;UBERON:0002100,5.73e-07,199;UBERON:0003104,7.41e-07,160;UBERON:0009142,7.41e-07,160 | |||
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| ||
|short_description=p3@FXYD2 | |||
}} | }} |
Latest revision as of 22:08, 15 September 2015
Short description: | p3@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FXYD2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 28bp_to_ENST00000533281_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.11e-42 | 17 |
kidney epithelial cell | 1.11e-42 | 17 |
kidney tubule cell | 1.71e-36 | 10 |
nephron tubule epithelial cell | 1.71e-36 | 10 |
epithelial cell of nephron | 2.99e-31 | 15 |
brush border epithelial cell | 7.91e-24 | 3 |
kidney cortex tubule cell | 7.91e-24 | 3 |
epithelial cell of proximal tubule | 7.91e-24 | 3 |
kidney cortical cell | 2.75e-22 | 12 |
renal cortical epithelial cell | 2.75e-22 | 12 |
perirenal preadipocyte | 4.54e-09 | 1 |
perirenal adipocyte cell | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.21e-40 | 26 |
kidney mesenchyme | 4.21e-40 | 26 |
upper urinary tract | 4.21e-40 | 26 |
kidney rudiment | 4.21e-40 | 26 |
kidney field | 4.21e-40 | 26 |
nephron tubule epithelium | 1.71e-36 | 10 |
cavitated compound organ | 2.61e-33 | 31 |
nephron epithelium | 2.99e-31 | 15 |
renal tubule | 2.99e-31 | 15 |
nephron tubule | 2.99e-31 | 15 |
nephron | 2.99e-31 | 15 |
uriniferous tubule | 2.99e-31 | 15 |
nephrogenic mesenchyme | 2.99e-31 | 15 |
excretory tube | 3.08e-29 | 16 |
kidney epithelium | 3.08e-29 | 16 |
abdomen element | 2.76e-25 | 54 |
abdominal segment element | 2.76e-25 | 54 |
renal cortex tubule | 7.91e-24 | 3 |
region of nephron tubule | 7.91e-24 | 3 |
proximal tubule | 7.91e-24 | 3 |
abdominal segment of trunk | 1.66e-22 | 60 |
abdomen | 1.66e-22 | 60 |
cortex of kidney | 2.75e-22 | 12 |
renal parenchyma | 2.75e-22 | 12 |
urinary system structure | 2.84e-21 | 47 |
renal system | 8.70e-21 | 48 |
cortex | 9.47e-18 | 15 |
parenchyma | 9.47e-18 | 15 |
trunk region element | 1.35e-16 | 101 |
perirenal fat | 3.49e-16 | 2 |
compound organ | 4.63e-14 | 68 |
subdivision of trunk | 1.05e-12 | 112 |
trunk | 5.73e-07 | 199 |
mesenchyme | 7.41e-07 | 160 |
entire embryonic mesenchyme | 7.41e-07 | 160 |