FFCP PHASE1:Hg19::chr2:233498013..233498030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80303 | |EntrezGene=80303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29556 | |HGNC=29556 | ||
|TSSclassifier=strong | |||
|UniProt=B4DEE0 | |UniProt=B4DEE0 | ||
|association_with_transcript=36bp_to_ENST00000540187_5end | |association_with_transcript=36bp_to_ENST00000540187_5end | ||
|cluster_id=chr2:233498013..233498030,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_EFHD1_5end | |description=CAGE_peak_4_at_EFHD1_5end | ||
|id=chr2:233498013..233498030,+ | |id=chr2:233498013..233498030,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-23;82!UBERON:0010122;5.83e-10;2!UBERON:0002532;9.15e-08;206!UBERON:0010316;9.15e-08;206!UBERON:0006241;8.93e-07;3!UBERON:0003057;8.93e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.23e-77;34!UBERON:0003528;8.94e-75;34!UBERON:0002020;8.94e-75;34!UBERON:0002791;1.01e-72;32!UBERON:0001869;2.12e-72;32!UBERON:0002780;3.74e-65;41!UBERON:0001890;3.74e-65;41!UBERON:0002619;4.63e-61;22!UBERON:0001950;9.99e-60;20!UBERON:0000073;1.70e-57;53!UBERON:0002616;1.70e-57;53!UBERON:0000956;1.59e-53;25!UBERON:0000203;1.59e-53;25!UBERON:0000125;3.36e-40;9!UBERON:0002308;3.36e-40;9!UBERON:0002420;5.08e-40;9!UBERON:0007245;5.08e-40;9!UBERON:0010009;5.08e-40;9!UBERON:0010011;5.08e-40;9!UBERON:0000454;5.08e-40;9!UBERON:0000955;1.09e-36;68!UBERON:0001017;3.46e-35;75!UBERON:0009663;1.34e-31;7!UBERON:0000200;5.65e-27;6!UBERON:0002298;1.02e-26;6!UBERON:0001016;1.06e-26;83!UBERON:0007023;8.38e-18;114!UBERON:0000369;8.82e-18;4!UBERON:0002435;8.82e-18;4!UBERON:0000204;8.82e-18;4!UBERON:0004732;1.71e-16;13!UBERON:0001871;1.72e-16;6!UBERON:0002021;2.92e-15;5!UBERON:0001872;3.51e-15;5!UBERON:0000349;8.43e-15;5!UBERON:0001870;2.37e-14;3!UBERON:0000988;3.05e-14;3!UBERON:0001896;3.05e-14;3!UBERON:0005290;3.05e-14;3!UBERON:0005383;7.07e-14;3!UBERON:0005382;7.07e-14;3!UBERON:0004733;4.39e-13;12!UBERON:0002028;4.39e-13;12!UBERON:0011216;2.40e-11;132!UBERON:0005162;4.91e-11;2!UBERON:0000122;4.91e-11;2!UBERON:0001897;5.54e-11;2!UBERON:0010225;5.54e-11;2!UBERON:0001875;5.67e-11;2!UBERON:0006514;5.67e-11;2!UBERON:0002771;1.83e-10;2!UBERON:0002148;2.48e-10;2!UBERON:0006331;2.48e-10;2!UBERON:0009662;2.48e-10;2!UBERON:0001876;3.77e-10;2!UBERON:0002702;4.86e-10;2!UBERON:0001873;5.83e-10;2!UBERON:0010314;2.30e-09;132!UBERON:0001894;7.89e-07;7!UBERON:0002240;8.93e-07;3!UBERON:0005174;8.93e-07;3!UBERON:0001137;8.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.58e-109,56;UBERON:0005068,1.58e-109,56;UBERON:0006241,1.58e-109,56;UBERON:0007135,1.58e-109,56;UBERON:0000073,7.95e-104,53;UBERON:0002616,7.95e-104,53;UBERON:0002780,4.04e-93,41;UBERON:0001890,4.04e-93,41;UBERON:0003080,4.04e-93,41;UBERON:0006240,4.04e-93,41;UBERON:0001893,2.89e-90,34;UBERON:0003528,3.58e-90,34;UBERON:0002020,3.58e-90,34;UBERON:0000955,3.85e-88,68;UBERON:0006238,3.85e-88,68;UBERON:0002791,7.95e-82,32;UBERON:0001017,1.64e-81,81;UBERON:0001869,2.21e-81,32;UBERON:0003075,2.92e-77,82;UBERON:0007284,2.92e-77,82;UBERON:0001016,5.22e-77,89;UBERON:0002346,2.36e-73,86;UBERON:0003056,1.54e-65,61;UBERON:0002619,5.00e-61,22;UBERON:0007023,1.56e-60,114;UBERON:0001950,1.10e-59,20;UBERON:0010371,1.90e-59,104;UBERON:0000956,1.70e-53,25;UBERON:0000203,1.70e-53,25;UBERON:0010314,5.84e-48,132;UBERON:0002420,3.96e-40,9;UBERON:0000125,3.96e-40,9;UBERON:0007245,3.96e-40,9;UBERON:0002308,3.96e-40,9;UBERON:0010009,3.96e-40,9;UBERON:0010011,3.96e-40,9;UBERON:0000454,3.96e-40,9;UBERON:0004121,5.55e-37,171;UBERON:0000924,5.55e-37,171;UBERON:0006601,5.55e-37,171;UBERON:0009663,1.34e-31,7;UBERON:0011216,4.06e-28,223;UBERON:0000025,6.98e-27,192;UBERON:0000200,7.12e-27,6;UBERON:0002298,1.03e-26,6;UBERON:0004111,5.90e-20,240;UBERON:0003076,5.37e-18,15;UBERON:0003057,5.37e-18,15;UBERON:0000369,8.44e-18,4;UBERON:0002435,8.44e-18,4;UBERON:0000204,8.44e-18,4;UBERON:0010082,8.44e-18,4;UBERON:0001871,1.66e-16,6;UBERON:0004732,1.72e-16,13;UBERON:0002021,2.98e-15,5;UBERON:0001872,3.45e-15,5;UBERON:0000483,4.26e-15,306;UBERON:0000349,5.98e-15,5;UBERON:0000119,7.13e-15,309;UBERON:0001870,2.21e-14,3;UBERON:0001896,2.92e-14,3;UBERON:0005290,2.92e-14,3;UBERON:0010096,2.92e-14,3;UBERON:0000988,3.20e-14,3;UBERON:0005383,7.92e-14,3;UBERON:0005382,7.92e-14,3;UBERON:0004733,4.40e-13,12;UBERON:0002028,4.40e-13,12;UBERON:0007277,4.40e-13,12;UBERON:0005162,4.79e-11,2;UBERON:0000122,4.79e-11,2;UBERON:0001897,5.54e-11,2;UBERON:0010225,5.54e-11,2;UBERON:0001875,5.82e-11,2;UBERON:0006514,5.82e-11,2;UBERON:0002771,2.42e-10,2;UBERON:0001876,2.92e-10,2;UBERON:0002148,2.92e-10,2;UBERON:0006331,2.92e-10,2;UBERON:0009662,2.92e-10,2;UBERON:0002702,4.23e-10,2;UBERON:0001873,6.40e-10,2;UBERON:0010122,6.40e-10,2;UBERON:0001894,7.97e-07,7;UBERON:0006222,7.97e-07,7;UBERON:0002240,8.05e-07,3;UBERON:0005174,8.05e-07,3;UBERON:0001137,8.05e-07,3 | |||
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|short_description=p4@EFHD1 | |short_description=p4@EFHD1 | ||
}} | }} |
Latest revision as of 22:03, 15 September 2015
Short description: | p4@EFHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EFHD1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 36bp_to_ENST00000540187_5end |
EntrezGene: | EFHD1 |
HGNC: | 29556 |
UniProt: | B4DEE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data