FFCP PHASE1:Hg19::chr7:1177857..1177873,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:1177857..1177873,- to FFCP PHASE1:Hg19::chr7:1177857..1177873,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84310 | |EntrezGene=84310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22421 | |HGNC=22421 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRJ6 | |UniProt=Q9BRJ6 | ||
|association_with_transcript=2bp_to_ENST00000397098_5end | |||
|cluster_id=chr7:1177857..1177873,- | |||
|description=CAGE_peak_4_at_C7orf50_5end | |||
|id=chr7:1177857..1177873,- | |||
|ontology_enrichment_celltype=CL:0000066!8.32e-28!254;CL:0002321!3.11e-13!248;CL:0000220!1.54e-12!246;CL:0000076!4.19e-07!62;CL:1000497!5.12e-07!18;CL:0002518!5.12e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.83e-09;17!CL:0002518;8.83e-09;17!CL:1000449;2.43e-08;15!CL:0002681;6.10e-08;12!CL:0002584;6.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.69e-27,253;CL:0002321,2.15e-11,250;CL:1000497,5.11e-09,17;CL:0002518,5.11e-09,17;CL:1000449,1.95e-08,15;CL:0002681,4.67e-08,12;CL:0002584,4.67e-08,12;CL:0000076,9.75e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.90e-15!106;DOID:162!6.66e-14!235;DOID:14566!7.06e-14!239;DOID:0050687!7.44e-12!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.74e-16,106;DOID:14566,3.48e-14,239;DOID:162,3.97e-14,235;DOID:0050687,2.08e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.46e-08!347;UBERON:0006554!1.84e-08!44;UBERON:0002113!2.01e-08!27;UBERON:0003918!2.01e-08!27;UBERON:0005095!2.01e-08!27;UBERON:0007687!2.01e-08!27;UBERON:0000119!3.42e-08!312;UBERON:0000483!6.16e-08!309;UBERON:0005177!6.64e-08!107;UBERON:0009569!7.92e-08!113;UBERON:0001008!8.71e-08!45;UBERON:0003104!1.62e-07!238;UBERON:0009142!1.62e-07!238;UBERON:0000025!9.09e-07!194;UBERON:0008947!9.37e-07!38;UBERON:0003258!9.37e-07!38;UBERON:0000489!9.88e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.43e-12;30!UBERON:0001008;1.43e-12;30!UBERON:0002113;6.91e-11;24!UBERON:0011143;6.91e-11;24!UBERON:0001851;8.09e-09;15!UBERON:0000489;1.94e-08;29!UBERON:0006555;2.43e-08;15!UBERON:0004819;2.43e-08;15!UBERON:0001285;2.43e-08;15!UBERON:0007684;2.43e-08;15!UBERON:0001225;6.10e-08;12!UBERON:0008987;6.10e-08;12!UBERON:0000072;7.25e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.82e-10,26;UBERON:0003918,2.82e-10,26;UBERON:0011143,2.82e-10,26;UBERON:0005095,2.82e-10,26;UBERON:0007687,2.82e-10,26;UBERON:0005177,3.59e-10,101;UBERON:0006554,4.94e-10,47;UBERON:0001008,1.66e-09,48;UBERON:0001851,8.44e-09,15;UBERON:0004211,1.95e-08,15;UBERON:0009773,1.95e-08,15;UBERON:0001231,1.95e-08,15;UBERON:0001285,1.95e-08,15;UBERON:0007684,1.95e-08,15;UBERON:0004208,1.95e-08,15;UBERON:0009569,2.01e-08,112;UBERON:0000489,4.46e-08,31;UBERON:0001225,4.67e-08,12;UBERON:0008987,4.67e-08,12;UBERON:0008947,8.18e-08,38;UBERON:0003258,8.18e-08,38;UBERON:0006555,1.77e-07,16;UBERON:0004819,1.77e-07,16;UBERON:0005172,8.68e-07,54;UBERON:0005173,8.68e-07,54;UBERON:0000353,8.70e-07,15 | |||
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| ||
|short_description=p4@C7orf50 | |||
}} | }} |
Latest revision as of 20:17, 15 September 2015
Short description: | p4@C7orf50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C7orf50_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000397098_5end |
EntrezGene: | C7orf50 |
HGNC: | 22421 |
UniProt: | Q9BRJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.69e-27 | 253 |
embryonic cell | 2.15e-11 | 250 |
kidney cell | 5.11e-09 | 17 |
kidney epithelial cell | 5.11e-09 | 17 |
epithelial cell of nephron | 1.95e-08 | 15 |
kidney cortical cell | 4.67e-08 | 12 |
renal cortical epithelial cell | 4.67e-08 | 12 |
squamous epithelial cell | 9.75e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.82e-10 | 26 |
kidney mesenchyme | 2.82e-10 | 26 |
upper urinary tract | 2.82e-10 | 26 |
kidney rudiment | 2.82e-10 | 26 |
kidney field | 2.82e-10 | 26 |
trunk region element | 3.59e-10 | 101 |
urinary system structure | 4.94e-10 | 47 |
renal system | 1.66e-09 | 48 |
cortex | 8.44e-09 | 15 |
nephron epithelium | 1.95e-08 | 15 |
renal tubule | 1.95e-08 | 15 |
nephron tubule | 1.95e-08 | 15 |
nephron | 1.95e-08 | 15 |
uriniferous tubule | 1.95e-08 | 15 |
nephrogenic mesenchyme | 1.95e-08 | 15 |
subdivision of trunk | 2.01e-08 | 112 |
cavitated compound organ | 4.46e-08 | 31 |
cortex of kidney | 4.67e-08 | 12 |
renal parenchyma | 4.67e-08 | 12 |
respiratory primordium | 8.18e-08 | 38 |
endoderm of foregut | 8.18e-08 | 38 |
excretory tube | 1.77e-07 | 16 |
kidney epithelium | 1.77e-07 | 16 |
abdomen element | 8.68e-07 | 54 |
abdominal segment element | 8.68e-07 | 54 |
parenchyma | 8.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.74e-16 | 106 |
disease of cellular proliferation | 3.48e-14 | 239 |
cancer | 3.97e-14 | 235 |
cell type cancer | 2.08e-12 | 143 |