FFCP PHASE1:Hg19::chr17:47287786..47287797,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:47287786..47287797,+
|short_description=p4@ABI3
|description=CAGE_peak_4_at_ABI3_5end
|association_with_transcript=13bp_to_ENST00000419580_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51225 | |EntrezGene=51225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29859 | |HGNC=29859 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2A4 | |UniProt=Q9P2A4 | ||
|association_with_transcript=13bp_to_ENST00000419580_5end | |||
|cluster_id=chr17:47287786..47287797,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_4_at_ABI3_5end | |||
|id=chr17:47287786..47287797,+ | |||
|ontology_enrichment_celltype=CL:0000115!5.62e-30!35;CL:0002139!1.10e-28!24;CL:0002078!1.67e-24!44;CL:0000071!1.90e-22!18;CL:0002546!1.90e-22!18;CL:0000213!1.13e-13!57;CL:0000215!1.13e-13!57;CL:1000413!3.38e-12!9;CL:0002544!1.32e-08!6;CL:0002543!1.68e-08!6;CL:0005020!8.60e-08!6;CL:0002138!8.60e-08!6;CL:0005022!8.60e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.34e-96;24!CL:0000115;2.65e-85;36!CL:0000071;4.51e-80;18!CL:0002078;9.10e-51;45!CL:1000413;2.64e-41;9!CL:0000213;1.95e-36;58!CL:0000215;1.95e-36;58!CL:0002544;8.87e-28;6!CL:0002543;2.17e-27;6!CL:0002138;3.05e-18;6!CL:0002188;4.94e-15;5!CL:0002144;2.02e-14;3!CL:0002618;8.33e-14;3!CL:0000076;1.79e-12;63!CL:1000746;9.18e-11;7!CL:1000612;9.18e-11;7!CL:0002545;2.54e-10;2!CL:0002262;3.94e-10;2!CL:1000398;3.94e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.87e-101,36;CL:0002139,2.39e-96,24;CL:0000071,3.03e-80,18;CL:0002546,3.03e-80,18;CL:0002078,1.44e-79,45;CL:0000213,3.19e-60,58;CL:0000215,3.19e-60,58;CL:1000413,2.06e-41,9;CL:0002544,6.61e-28,6;CL:0002543,1.66e-27,6;CL:0000222,2.40e-25,121;CL:0000076,8.16e-20,63;CL:0005020,4.26e-18,6;CL:0002138,4.26e-18,6;CL:0005022,4.26e-18,6;CL:0002188,4.69e-15,5;CL:0002144,2.27e-14,3;CL:0002618,6.99e-14,3;CL:1000746,8.85e-11,7;CL:1000612,8.85e-11,7;CL:0002545,2.32e-10,2;CL:0002262,4.23e-10,2;CL:1000398,4.23e-10,2;CL:0000066,1.53e-09,253;CL:0002321,9.77e-09,250 | |||
|ontology_enrichment_development_v019=CL:0002546;4.51e-80;18!CL:0005022;3.05e-18;6!CL:0000222;2.80e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.90e-22!18;UBERON:0004638!1.90e-22!18;UBERON:0004852!1.90e-22!18;UBERON:0007023!5.92e-18!115;UBERON:0000487!5.21e-17!22;UBERON:0006914!4.13e-14!25;UBERON:0000055!3.39e-13!69;UBERON:0003081!4.17e-13!216;UBERON:0003915!3.38e-12!9;UBERON:0004700!3.38e-12!9;UBERON:0001917!3.38e-12!9;UBERON:0004111!2.65e-11!241;UBERON:0000477!3.44e-11!286;UBERON:0002049!1.26e-10!79;UBERON:0007798!1.26e-10!79;UBERON:0004872!3.19e-10!84;UBERON:0001981!3.31e-10!60;UBERON:0007500!3.31e-10!60;UBERON:0004537!3.31e-10!60;UBERON:0006965!3.31e-10!60;UBERON:0000025!1.22e-09!194;UBERON:0001009!2.19e-09!113;UBERON:0004535!2.48e-09!110;UBERON:0002193!7.24e-08!112;UBERON:0002405!1.26e-07!115;UBERON:0003914!1.85e-07!118;UBERON:0001638!6.14e-07!9;UBERON:0003920!6.14e-07!9;UBERON:0004582!6.14e-07!9;UBERON:0002465!8.15e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.51e-80;18!UBERON:0001986;4.51e-80;18!UBERON:0004852;4.51e-80;18!UBERON:0000487;1.01e-64;22!UBERON:0006914;1.98e-56;25!UBERON:0003915;2.64e-41;9!UBERON:0004700;2.64e-41;9!UBERON:0001917;2.64e-41;9!UBERON:0000490;2.45e-38;33!UBERON:0001638;3.76e-24;9!UBERON:0003920;3.76e-24;9!UBERON:0004582;3.76e-24;9!UBERON:0000055;1.98e-23;65!UBERON:0007500;2.24e-19;56!UBERON:0001981;2.24e-19;56!UBERON:0004537;2.24e-19;56!UBERON:0002049;5.28e-15;75!UBERON:0007798;5.28e-15;75!UBERON:0003914;6.96e-15;74!UBERON:0010523;2.02e-14;3!UBERON:0001915;2.02e-14;3!UBERON:0001982;2.02e-14;3!UBERON:0001473;1.25e-13;8!UBERON:0004536;1.25e-13;8!UBERON:0006558;1.25e-13;8!UBERON:0004535;2.54e-11;109!UBERON:0001009;4.86e-11;112!UBERON:0002465;7.42e-11;10!UBERON:0000074;9.18e-11;7!UBERON:0001229;9.18e-11;7!UBERON:0000025;1.17e-10;93!UBERON:0000353;1.73e-10;15!UBERON:0005800;2.54e-10;2!UBERON:0001515;2.54e-10;2!UBERON:0001281;3.94e-10;2!UBERON:0003497;3.94e-10;2!UBERON:0003909;3.94e-10;2!UBERON:0003835;3.94e-10;2!UBERON:0002066;1.79e-08;5!UBERON:0004111;3.27e-08;130!UBERON:0001637;1.49e-07;42!UBERON:0003509;1.49e-07;42!UBERON:0004572;1.49e-07;42!UBERON:0000947;1.78e-07;21!UBERON:0010191;1.78e-07;21!UBERON:0001280;5.07e-07;3!UBERON:0004647;5.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.03e-80,18;UBERON:0001986,3.03e-80,18;UBERON:0004852,3.03e-80,18;UBERON:0000487,7.31e-65,22;UBERON:0006914,1.49e-56,25;UBERON:0000055,5.82e-43,68;UBERON:0003915,2.06e-41,9;UBERON:0004700,2.06e-41,9;UBERON:0001917,2.06e-41,9;UBERON:0002049,1.24e-36,78;UBERON:0007798,1.24e-36,78;UBERON:0007500,7.20e-33,59;UBERON:0001981,7.20e-33,59;UBERON:0004537,7.20e-33,59;UBERON:0006965,7.20e-33,59;UBERON:0004535,1.57e-28,109;UBERON:0001009,1.38e-27,112;UBERON:0001638,4.35e-24,9;UBERON:0003920,4.35e-24,9;UBERON:0004582,4.35e-24,9;UBERON:0004872,5.45e-24,83;UBERON:0003914,1.74e-22,117;UBERON:0003081,2.12e-18,203;UBERON:0010523,2.27e-14,3;UBERON:0001915,2.27e-14,3;UBERON:0001982,2.27e-14,3;UBERON:0001473,1.60e-13,8;UBERON:0004536,1.60e-13,8;UBERON:0006558,1.60e-13,8;UBERON:0004111,2.29e-13,240;UBERON:0000025,3.61e-11,192;UBERON:0010532,8.85e-11,7;UBERON:0000074,8.85e-11,7;UBERON:0001229,8.85e-11,7;UBERON:0001230,8.85e-11,7;UBERON:0003220,8.85e-11,7;UBERON:0005749,8.85e-11,7;UBERON:0004199,8.85e-11,7;UBERON:0004209,8.85e-11,7;UBERON:0004198,8.85e-11,7;UBERON:0002465,9.01e-11,10;UBERON:0000353,1.73e-10,15;UBERON:0005800,2.32e-10,2;UBERON:0001515,2.32e-10,2;UBERON:0004876,3.29e-10,11;UBERON:0001281,4.23e-10,2;UBERON:0003497,4.23e-10,2;UBERON:0003909,4.23e-10,2;UBERON:0003835,4.23e-10,2;UBERON:0000926,4.50e-10,315;UBERON:0004120,4.50e-10,315;UBERON:0006603,4.50e-10,315;UBERON:0000490,5.56e-10,148;UBERON:0005103,1.94e-09,8;UBERON:0000083,1.94e-09,8;UBERON:0009201,1.94e-09,8;UBERON:0006553,1.94e-09,8;UBERON:0003074,1.94e-09,8;UBERON:0003060,1.94e-09,8;UBERON:0002066,1.61e-08,5;UBERON:0000080,2.14e-08,9;UBERON:0002120,2.14e-08,9;UBERON:0004875,2.14e-08,9;UBERON:0005721,2.14e-08,9;UBERON:0005754,2.14e-08,9;UBERON:0007297,2.14e-08,9;UBERON:0000058,3.82e-08,19;UBERON:0001637,1.43e-07,42;UBERON:0003509,1.43e-07,42;UBERON:0004572,1.43e-07,42;UBERON:0000947,1.65e-07,21;UBERON:0010191,1.65e-07,21;UBERON:0001280,5.31e-07,3;UBERON:0004647,5.31e-07,3;UBERON:0005171,5.31e-07,3 | |||
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| ||
|short_description=p4@ABI3 | |||
}} | }} |
Latest revision as of 20:08, 15 September 2015
Short description: | p4@ABI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABI3_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 13bp_to_ENST00000419580_5end |
EntrezGene: | ABI3 |
HGNC: | 29859 |
UniProt: | Q9P2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.87e-101 | 36 |
endothelial cell of vascular tree | 2.39e-96 | 24 |
blood vessel endothelial cell | 3.03e-80 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.03e-80 | 18 |
meso-epithelial cell | 1.44e-79 | 45 |
lining cell | 3.19e-60 | 58 |
barrier cell | 3.19e-60 | 58 |
endothelial cell of artery | 2.06e-41 | 9 |
aortic endothelial cell | 6.61e-28 | 6 |
vein endothelial cell | 1.66e-27 | 6 |
mesodermal cell | 2.40e-25 | 121 |
squamous epithelial cell | 8.16e-20 | 63 |
lymphangioblast | 4.26e-18 | 6 |
endothelial cell of lymphatic vessel | 4.26e-18 | 6 |
vascular lymphangioblast | 4.26e-18 | 6 |
glomerular endothelial cell | 4.69e-15 | 5 |
capillary endothelial cell | 2.27e-14 | 3 |
endothelial cell of umbilical vein | 6.99e-14 | 3 |
glomerular cell | 8.85e-11 | 7 |
kidney corpuscule cell | 8.85e-11 | 7 |
thoracic aorta endothelial cell | 2.32e-10 | 2 |
endothelial cell of sinusoid | 4.23e-10 | 2 |
endothelial cell of hepatic sinusoid | 4.23e-10 | 2 |
epithelial cell | 1.53e-09 | 253 |
embryonic cell | 9.77e-09 | 250 |