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FFCP PHASE1:Mm9::chr5:104211087..104211090,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2410
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr5:104211087..104211090,+
|description=CAGE_peak_at_chr5:104211087..104211090,+
|description=CAGE_peak_at_chr5:104211087..104211090,+
|id=chr5:104211087..104211090,+
|id=chr5:104211087..104211090,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.02e-17!193;UBERON:0004120!3.02e-17!193;UBERON:0006603!3.02e-17!193;UBERON:0003104!9.83e-16!131;UBERON:0009142!9.83e-16!131;UBERON:0000077!1.76e-13!97;UBERON:0001048!2.69e-13!147;UBERON:0001041!2.53e-12!92;UBERON:0005057!9.61e-12!51;UBERON:0002405!5.31e-11!70;UBERON:0004921!3.96e-09!126;UBERON:0004185!3.96e-09!126;UBERON:0004177!6.24e-09!29;UBERON:0004119!6.47e-09!130;UBERON:0000925!6.47e-09!130;UBERON:0006595!6.47e-09!130;UBERON:0001007!8.06e-09!128;UBERON:0001555!8.06e-09!128;UBERON:0007026!8.06e-09!128;UBERON:0009569!1.29e-08!66;UBERON:0002530!2.15e-08!65;UBERON:0003081!2.23e-08!88;UBERON:0002390!4.33e-08!45;UBERON:0003061!4.33e-08!45;UBERON:0002193!9.88e-08!48;UBERON:0005911!1.41e-07!69;UBERON:0001004!1.72e-07!42;UBERON:0005172!2.28e-07!49;UBERON:0005173!2.28e-07!49;UBERON:0002417!2.28e-07!49;UBERON:0000916!2.28e-07!49;UBERON:0000466!2.71e-07!79;UBERON:0000065!3.92e-07!41;UBERON:0003408!4.72e-07!24;UBERON:0002368!5.21e-07!60;UBERON:0000949!9.58e-07!72
|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.60e-14,80;UBERON:0001048,1.40e-13,134;UBERON:0004921,2.20e-11,114;UBERON:0001007,8.30e-11,116;UBERON:0001555,8.30e-11,116;UBERON:0007026,8.30e-11,116;UBERON:0000077,1.37e-10,35;UBERON:0005911,2.75e-10,69;UBERON:0004119,2.96e-10,118;UBERON:0000925,2.96e-10,118;UBERON:0006595,2.96e-10,118;UBERON:0004177,3.06e-10,29;UBERON:0005057,3.06e-10,29;UBERON:0002390,5.19e-10,45;UBERON:0003061,5.19e-10,45;UBERON:0005177,1.18e-09,79;UBERON:0001004,1.31e-09,42;UBERON:0009569,1.50e-09,66;UBERON:0002193,2.36e-09,48;UBERON:0002405,2.36e-09,48;UBERON:0000065,3.84e-09,41;UBERON:0002100,5.75e-09,90;UBERON:0002530,1.57e-08,65;UBERON:0003408,3.50e-08,24;UBERON:0003081,5.13e-08,87;UBERON:0007811,5.58e-08,36;UBERON:0002370,1.08e-07,23;UBERON:0000974,1.08e-07,23;UBERON:0004807,1.08e-07,23;UBERON:0005058,1.08e-07,23;UBERON:0003351,1.08e-07,23;UBERON:0009113,1.08e-07,23;UBERON:0003295,1.08e-07,23;UBERON:0009722,1.08e-07,23;UBERON:0005562,1.08e-07,23;UBERON:0007690,1.08e-07,23;UBERON:0003929,3.46e-07,55;UBERON:0005172,4.00e-07,49;UBERON:0005173,4.00e-07,49;UBERON:0002417,4.00e-07,49;UBERON:0000916,4.00e-07,49;UBERON:0006562,4.25e-07,24;UBERON:0001557,4.25e-07,24;UBERON:0001042,4.25e-07,24;UBERON:0008814,4.25e-07,24;UBERON:0009145,4.25e-07,24;UBERON:0002368,6.73e-07,60;UBERON:0000926,9.63e-07,120;UBERON:0004120,9.63e-07,120;UBERON:0006603,9.63e-07,120;UBERON:0000949,9.72e-07,72
|phase1_expression=0.160148847104794,0.697950815278722,0,0,0,0,0,0.774739940649458,3.51971805379167,1.87251621057595,0.34243593645101,0.558405112967355,0.856003649656029,1.13646523144697,1.66554880907831,2.63217847606774,0.699561878128147,2.99689057090326,3.70208970735495,4.2438965179803,0.935476191661768,0.198581902401771,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0.332469290716985,0,1.25559489221072,0,0.523523743973798,3.52938892818609,0.683045484958446,0.485510353031154,0.377690453926732,0.101376931219515,0.917733760808408,0,0,0,0.388859798148567,0,0,5.70460860596304,2.17608642603403,1.68046899571232,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,1.72084775396277,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,0,0.259786004602869,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,1.01104889002957,1.94112595522402,1.55362730188303,1.03909497345377,0.173485326766136,0,1.15307748628029,0.904335843315735,1.41106448562846,0.628332956648377,1.73036477414062,0.722996784599558,3.5384422077995,1.7794353494215,3.97514733228708,3.39412677194655,0,0.585561594023094,0.83778682725382,2.04365644166873,0.838705871541442,0.599902730993408,1.39777249780371,0,1.37250180845588,0.251308704225729,0.521472960576829,0.255715457330331,0.20778804455956,0,0.305518091550949,3.11017426525233,4.80173241023982,1.89397670297827,0.910843100738926,0.229902104433473,0.180062129805349,2.71268672104287,2.24520447199382,4.48398020996974,2.24884138943349,7.24369438069244,0.646703978798527,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,1.02891068203972,0.796137067273973,2.1066395619397,0.51469581422943,1.13665399758237,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0.925602677324269,0.465067889500816,1.3413670069981,0.817357396570186,1.15191894939436,2.79084688934462,1.29710095273369,1.75439984910399,1.97595103761946,0.805238512562231,0.420579897128254,0.308713837137853,2.64335026387038,0,0.213288250535234,0.928946687441754,0.38660238396628,0.201683524623343,1.33426826306922,0.190225626112559,3.79623249235609,0.988193728344065,1.75934646160189,0.994782360205754,2.14460495831032,0,3.45820879799511,2.19055400579804,0.379335801906163,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,0.98190147846446,2.02356918797623,1.47610147979602,3.45397201251025,2.22114895059241,0.889357881261447,0.83422552858047,1.37591296579242,3.14806957338795,1.62288097110802,1.4470629585145,2.29163266603278,1.15078454980324,4.37765112292595,1.92192989231657,2.87536413054709,1.11642284300551,1.87222603868736,1.51547326768267,1.07638448113147,1.4473305640901,2.58654466233247,0.189491411770485,0,0.339490171550376,1.17345124144251,1.84256883185997,1.42826184531608,2.73187107000918,2.36452716159286,1.99318220683897,2.55127629851979,3.4411296090305,2.41758974612254,3.7608755231193,3.01582567878545,1.08781136763742,1.96705709207614,1.10374698521893,0.160550589987792,0.234423373184406,0,1.76729649043061,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,2.2710413633323,0.35613120733451,0.325773918707152,0.989820737835213,0,0.242780636154981,0.906970670894253,0.377210159511796,0,1.84461088766356,0.775284879504663,5.45300594216258,3.20847640546249,2.21225730555071,0,2.06271086496374,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.713475270408282,0.987294123612726,0.608929898229199,0.938686832254841,0.847328283455281,1.7642271844397,1.15420377059036,1.45317984026315,0.784068024066026,0.596861720015682,0.984845398470368,1.7488850197791,0,3.07567585436135,0.619160603889667,2.22233432843654,9.60679130723924,5.33107488111998,5.94823250336959,1.86976272993241,1.53946597556024,1.38199973804424,0.954670618015114,0,0.203319467126849,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,1.40510874733071,1.30877970992015,3.75883422546199,2.4853572523477,0,0.299033092087958,0.165458490457098,0.388902376688095,1.03327858782185,0.506868376472335,2.11243029562357,1.69265700297135,0.629156066554265,0.966336483304024,1.15212002503146,4.74016680942267,0.202725215290164,1.23253148597793,1.55904987573354,2.50637373934474,3.77494574084403,6.97133607215819,7.97523446742717,6.25991989678515,7.31585343887998,7.76361625553672,4.28814675254911,6.15755786498109,9.46702907670709,0.453460767230423,0.221985953374065,0.0897138566094757,0,2.31827512838629,2.25218970541418,1.09890974560359,3.00115730710692,5.517293144389,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,0.682934423016537,1.70174701947806,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.754505365544305,0.655490552289177,0.768301828858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|phase1_expression=0.160148847104794,0.697950815278722,0,0,0,0,0,0.774739940649458,3.51971805379167,1.87251621057595,0.34243593645101,0.558405112967355,0.856003649656029,1.13646523144697,1.66554880907831,2.63217847606774,0.699561878128147,2.99689057090326,3.70208970735495,4.2438965179803,0.935476191661768,0.198581902401771,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0.332469290716985,0,1.25559489221072,0,0.523523743973798,3.52938892818609,0.683045484958446,0.485510353031154,0.377690453926732,0.101376931219515,0.917733760808408,0,0,0,0.388859798148567,0,0,5.70460860596304,2.17608642603403,1.68046899571232,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,1.72084775396277,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,0,0.259786004602869,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,1.01104889002957,1.94112595522402,1.55362730188303,1.03909497345377,0.173485326766136,0,1.15307748628029,0.904335843315735,1.41106448562846,0.628332956648377,1.73036477414062,0.722996784599558,3.5384422077995,1.7794353494215,3.97514733228708,3.39412677194655,0,0.585561594023094,0.83778682725382,2.04365644166873,0.838705871541442,0.599902730993408,1.39777249780371,0,1.37250180845588,0.251308704225729,0.521472960576829,0.255715457330331,0.20778804455956,0,0.305518091550949,3.11017426525233,4.80173241023982,1.89397670297827,0.910843100738926,0.229902104433473,0.180062129805349,2.71268672104287,2.24520447199382,4.48398020996974,2.24884138943349,7.24369438069244,0.646703978798527,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,1.02891068203972,0.796137067273973,2.1066395619397,0.51469581422943,1.13665399758237,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0.925602677324269,0.465067889500816,1.3413670069981,0.817357396570186,1.15191894939436,2.79084688934462,1.29710095273369,1.75439984910399,1.97595103761946,0.805238512562231,0.420579897128254,0.308713837137853,2.64335026387038,0,0.213288250535234,0.928946687441754,0.38660238396628,0.201683524623343,1.33426826306922,0.190225626112559,3.79623249235609,0.988193728344065,1.75934646160189,0.994782360205754,2.14460495831032,0,3.45820879799511,2.19055400579804,0.379335801906163,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,0.98190147846446,2.02356918797623,1.47610147979602,3.45397201251025,2.22114895059241,0.889357881261447,0.83422552858047,1.37591296579242,3.14806957338795,1.62288097110802,1.4470629585145,2.29163266603278,1.15078454980324,4.37765112292595,1.92192989231657,2.87536413054709,1.11642284300551,1.87222603868736,1.51547326768267,1.07638448113147,1.4473305640901,2.58654466233247,0.189491411770485,0,0.339490171550376,1.17345124144251,1.84256883185997,1.42826184531608,2.73187107000918,2.36452716159286,1.99318220683897,2.55127629851979,3.4411296090305,2.41758974612254,3.7608755231193,3.01582567878545,1.08781136763742,1.96705709207614,1.10374698521893,0.160550589987792,0.234423373184406,0,1.76729649043061,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,2.2710413633323,0.35613120733451,0.325773918707152,0.989820737835213,0,0.242780636154981,0.906970670894253,0.377210159511796,0,1.84461088766356,0.775284879504663,5.45300594216258,3.20847640546249,2.21225730555071,0,2.06271086496374,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.713475270408282,0.987294123612726,0.608929898229199,0.938686832254841,0.847328283455281,1.7642271844397,1.15420377059036,1.45317984026315,0.784068024066026,0.596861720015682,0.984845398470368,1.7488850197791,0,3.07567585436135,0.619160603889667,2.22233432843654,9.60679130723924,5.33107488111998,5.94823250336959,1.86976272993241,1.53946597556024,1.38199973804424,0.954670618015114,0,0.203319467126849,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,1.40510874733071,1.30877970992015,3.75883422546199,2.4853572523477,0,0.299033092087958,0.165458490457098,0.388902376688095,1.03327858782185,0.506868376472335,2.11243029562357,1.69265700297135,0.629156066554265,0.966336483304024,1.15212002503146,4.74016680942267,0.202725215290164,1.23253148597793,1.55904987573354,2.50637373934474,3.77494574084403,6.97133607215819,7.97523446742717,6.25991989678515,7.31585343887998,7.76361625553672,4.28814675254911,6.15755786498109,9.46702907670709,0.453460767230423,0.221985953374065,0.0897138566094757,0,2.31827512838629,2.25218970541418,1.09890974560359,3.00115730710692,5.517293144389,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,0.682934423016537,1.70174701947806,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.754505365544305,0.655490552289177,0.768301828858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|short_description=p@chr5:104211087..104211090,+
|short_description=p@chr5:104211087..104211090,+
}}
}}

Latest revision as of 22:04, 5 August 2015

Short description:p@chr5:104211087..104211090, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:104211087..104211090, +
Coexpression cluster:MCL_coexpression_mm9:2410
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr5:104211087..104211090+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F86.97
thymus, neonate N03.CNhs11137.2104-43C77.98
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D37.32
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G29.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut3.60e-1480
primordium1.40e-13134
subdivision of digestive tract2.20e-11114
digestive system8.30e-11116
digestive tract8.30e-11116
primitive gut8.30e-11116
mixed endoderm/mesoderm-derived structure1.37e-1035
endo-epithelium2.75e-1069
endoderm-derived structure2.96e-10118
endoderm2.96e-10118
presumptive endoderm2.96e-10118
hemopoietic organ3.06e-1029
immune organ3.06e-1029
hematopoietic system5.19e-1045
blood island5.19e-1045
trunk region element1.18e-0979
respiratory system1.31e-0942
subdivision of trunk1.50e-0966
hemolymphoid system2.36e-0948
immune system2.36e-0948
respiratory tract3.84e-0941
trunk5.75e-0990
gland1.57e-0865
gland of gut3.50e-0824
lateral plate mesoderm5.13e-0887
craniocervical region5.58e-0836
thymus1.08e-0723
neck1.08e-0723
respiratory system epithelium1.08e-0723
hemolymphoid system gland1.08e-0723
pharyngeal epithelium1.08e-0723
thymic region1.08e-0723
pharyngeal gland1.08e-0723
entire pharyngeal arch endoderm1.08e-0723
thymus primordium1.08e-0723
early pharyngeal endoderm1.08e-0723
gut epithelium3.46e-0755
abdomen element4.00e-0749
abdominal segment element4.00e-0749
abdominal segment of trunk4.00e-0749
abdomen4.00e-0749
pharynx4.25e-0724
upper respiratory tract4.25e-0724
chordate pharynx4.25e-0724
pharyngeal arch system4.25e-0724
pharyngeal region of foregut4.25e-0724
endocrine gland6.73e-0760
mesoderm9.63e-07120
mesoderm-derived structure9.63e-07120
presumptive mesoderm9.63e-07120
endocrine system9.72e-0772
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