FFCP PHASE1:Mm9::chr1:43990453..43990471,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22019|HGNC=|MCL_coexpression_id=33|UniProt=Q64514|association_with_transcript=-375bp_to_ENSMUST00000087933,ENSMUST00000097767_5end|description=CAGE_peak_2_at_Tpp2_5end|id=chr1:43990453..43990471,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-10,9;CL:0000789,2.30e-10,9;CL:0002420,2.30e-10,9;CL:0002419,2.30e-10,9;CL:0000790,2.30e-10,9;CL:0000084,2.02e-08,11;CL:0000827,2.02e-08,11;CL:0000624,8.51e-08,8;CL:0000838,1.09e-07,12;CL:0000542,4.51e-07,13;CL:0000051,4.51e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-27,23;UBERON:0000974,1.23e-27,23;UBERON:0004807,1.23e-27,23;UBERON:0005058,1.23e-27,23;UBERON:0003351,1.23e-27,23;UBERON:0009113,1.23e-27,23;UBERON:0003295,1.23e-27,23;UBERON:0009722,1.23e-27,23;UBERON:0005562,1.23e-27,23;UBERON:0007690,1.23e-27,23;UBERON:0006562,2.26e-26,24;UBERON:0003408,2.26e-26,24;UBERON:0001557,2.26e-26,24;UBERON:0001042,2.26e-26,24;UBERON:0008814,2.26e-26,24;UBERON:0009145,2.26e-26,24;UBERON:0000072,3.85e-23,27;UBERON:0004177,2.34e-21,29;UBERON:0005057,2.34e-21,29;UBERON:0000077,5.78e-20,35;UBERON:0002390,6.15e-17,45;UBERON:0003061,6.15e-17,45;UBERON:0007811,1.13e-16,36;UBERON:0002193,1.11e-15,48;UBERON:0002405,1.11e-15,48;UBERON:0000065,2.63e-14,41;UBERON:0001004,6.68e-14,42;UBERON:0000153,1.63e-13,43;UBERON:0003929,2.16e-13,55;UBERON:0000490,3.75e-12,66;UBERON:0002368,5.17e-12,60;UBERON:0002530,7.58e-11,65;UBERON:0003081,8.13e-11,87;UBERON:0005911,4.91e-10,69;UBERON:0000949,1.74e-09,72;UBERON:0001041,3.18e-08,80;UBERON:0000926,8.85e-08,120;UBERON:0004120,8.85e-08,120;UBERON:0006603,8.85e-08,120|phase1_expression=0,0,0,0,0.500895729946347,0,0,1.80772652818207,1.68946466582,0,0.171217968225505,0.159544317990673,2.73921167889929,3.14713448708391,0,0.404950534779652,0,1.41957974411207,0.685572168028694,0,0.255129870453209,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0.7813353445238,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,1.68046899571232,0.514518872071894,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0.372798891650601,0.151452386666368,0.377857800533928,1.44932244350839,0,1.3599426674155,0,0,0,0.140444420131752,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.587943535678524,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0.511430914660661,0.20778804455956,0.324482526135515,0,0.248813941220186,1.0108910337347,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,1.02939162845886,0.852490498186778,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.280543279561274,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.333690211432188,0.196558995113203,0.674586337154561,0,0,0.50925170356284,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0.321101179975584,0.468846746368813,0,1.00988370881749,0.631016438832513,0,0,0,0.445597348164788,0.849229592366497,0.809621403349789,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0,0.27338845544205,0.228778173206523,1.69978429993855,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0,1.26404448251271,0,0.205421914329655,0.129920822977795,1.43221356533985,1.58945083825012,1.44234539423963,1.03382669022204,1.61546319917036,1.295515713135,1.31074040677893,2.24153125701431,1.44317762460494,2.33753804363138,0.453460767230423,0,0,0.167884616364078,0,0.375364950902364,0.183151624267265,0.428736758158132,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p2@Tpp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22019 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64514 | |||
|association_with_transcript=-375bp_to_ENSMUST00000087933,ENSMUST00000097767_5end | |||
|cluster_id=chr1:43990453..43990471,+ | |||
|description=CAGE_peak_2_at_Tpp2_5end | |||
|id=chr1:43990453..43990471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-10,9;CL:0000789,2.30e-10,9;CL:0002420,2.30e-10,9;CL:0002419,2.30e-10,9;CL:0000790,2.30e-10,9;CL:0000084,2.02e-08,11;CL:0000827,2.02e-08,11;CL:0000624,8.51e-08,8;CL:0000838,1.09e-07,12;CL:0000542,4.51e-07,13;CL:0000051,4.51e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-27,23;UBERON:0000974,1.23e-27,23;UBERON:0004807,1.23e-27,23;UBERON:0005058,1.23e-27,23;UBERON:0003351,1.23e-27,23;UBERON:0009113,1.23e-27,23;UBERON:0003295,1.23e-27,23;UBERON:0009722,1.23e-27,23;UBERON:0005562,1.23e-27,23;UBERON:0007690,1.23e-27,23;UBERON:0006562,2.26e-26,24;UBERON:0003408,2.26e-26,24;UBERON:0001557,2.26e-26,24;UBERON:0001042,2.26e-26,24;UBERON:0008814,2.26e-26,24;UBERON:0009145,2.26e-26,24;UBERON:0000072,3.85e-23,27;UBERON:0004177,2.34e-21,29;UBERON:0005057,2.34e-21,29;UBERON:0000077,5.78e-20,35;UBERON:0002390,6.15e-17,45;UBERON:0003061,6.15e-17,45;UBERON:0007811,1.13e-16,36;UBERON:0002193,1.11e-15,48;UBERON:0002405,1.11e-15,48;UBERON:0000065,2.63e-14,41;UBERON:0001004,6.68e-14,42;UBERON:0000153,1.63e-13,43;UBERON:0003929,2.16e-13,55;UBERON:0000490,3.75e-12,66;UBERON:0002368,5.17e-12,60;UBERON:0002530,7.58e-11,65;UBERON:0003081,8.13e-11,87;UBERON:0005911,4.91e-10,69;UBERON:0000949,1.74e-09,72;UBERON:0001041,3.18e-08,80;UBERON:0000926,8.85e-08,120;UBERON:0004120,8.85e-08,120;UBERON:0006603,8.85e-08,120 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,1.80772652818207,1.68946466582,0,0.171217968225505,0.159544317990673,2.73921167889929,3.14713448708391,0,0.404950534779652,0,1.41957974411207,0.685572168028694,0,0.255129870453209,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0.7813353445238,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,1.68046899571232,0.514518872071894,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0.372798891650601,0.151452386666368,0.377857800533928,1.44932244350839,0,1.3599426674155,0,0,0,0.140444420131752,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.587943535678524,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0.511430914660661,0.20778804455956,0.324482526135515,0,0.248813941220186,1.0108910337347,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,1.02939162845886,0.852490498186778,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.280543279561274,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.333690211432188,0.196558995113203,0.674586337154561,0,0,0.50925170356284,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0.321101179975584,0.468846746368813,0,1.00988370881749,0.631016438832513,0,0,0,0.445597348164788,0.849229592366497,0.809621403349789,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0,0.27338845544205,0.228778173206523,1.69978429993855,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0,1.26404448251271,0,0.205421914329655,0.129920822977795,1.43221356533985,1.58945083825012,1.44234539423963,1.03382669022204,1.61546319917036,1.295515713135,1.31074040677893,2.24153125701431,1.44317762460494,2.33753804363138,0.453460767230423,0,0,0.167884616364078,0,0.375364950902364,0.183151624267265,0.428736758158132,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Tpp2 | |||
}} |
Revision as of 16:42, 5 August 2015
Short description: | p2@Tpp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tpp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -375bp_to_ENSMUST00000087933, ENSMUST00000097767_5end |
EntrezGene: | 22019 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.30e-10 | 9 |
alpha-beta T cell | 2.30e-10 | 9 |
immature T cell | 2.30e-10 | 9 |
mature T cell | 2.30e-10 | 9 |
immature alpha-beta T cell | 2.30e-10 | 9 |
T cell | 2.02e-08 | 11 |
pro-T cell | 2.02e-08 | 11 |
CD4-positive, alpha-beta T cell | 8.51e-08 | 8 |
lymphoid lineage restricted progenitor cell | 1.09e-07 | 12 |
lymphocyte | 4.51e-07 | 13 |
common lymphoid progenitor | 4.51e-07 | 13 |