FFCP PHASE1:Mm9::chr17:86014476..86014492,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |MCL_coexpression_id=133 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=196bp_to_ENSMUST00000162311_5end | |association_with_transcript=196bp_to_ENSMUST00000162311_5end | ||
|cluster_id=chr17:86014476..86014492,- | |||
|description=CAGE_peak_1_at_ENSMUST00000162311_5end | |description=CAGE_peak_1_at_ENSMUST00000162311_5end | ||
|id=chr17:86014476..86014492,- | |id=chr17:86014476..86014492,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.31e-12,3;CL:0002613,3.30e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.08e-15!49;UBERON:0000970!2.76e-13!9;UBERON:0000019!2.76e-13!9;UBERON:0000047!2.76e-13!9;UBERON:0004088!2.76e-13!9;UBERON:0002104!2.76e-13!9;UBERON:0001456!2.76e-13!9;UBERON:0003072!2.76e-13!9;UBERON:0003071!2.76e-13!9;UBERON:0004128!2.76e-13!9;UBERON:0001894!5.33e-12!10;UBERON:0006222!5.33e-12!10;UBERON:0000033!1.46e-11!63;UBERON:0000007!6.76e-11!8;UBERON:0003296!6.76e-11!8;UBERON:0010133!6.76e-11!8;UBERON:0001444!2.13e-10!11;UBERON:0000020!2.54e-09!12;UBERON:0001032!2.54e-09!12;UBERON:0004456!2.54e-09!12;UBERON:0005085!2.06e-08!13;UBERON:0002346!6.77e-08!71;UBERON:0003075!6.77e-08!71;UBERON:0007284!6.77e-08!71;UBERON:0003080!4.51e-07!40 | |ontology_enrichment_uberon=UBERON:0003056!4.08e-15!49;UBERON:0000970!2.76e-13!9;UBERON:0000019!2.76e-13!9;UBERON:0000047!2.76e-13!9;UBERON:0004088!2.76e-13!9;UBERON:0002104!2.76e-13!9;UBERON:0001456!2.76e-13!9;UBERON:0003072!2.76e-13!9;UBERON:0003071!2.76e-13!9;UBERON:0004128!2.76e-13!9;UBERON:0001894!5.33e-12!10;UBERON:0006222!5.33e-12!10;UBERON:0000033!1.46e-11!63;UBERON:0000007!6.76e-11!8;UBERON:0003296!6.76e-11!8;UBERON:0010133!6.76e-11!8;UBERON:0001444!2.13e-10!11;UBERON:0000020!2.54e-09!12;UBERON:0001032!2.54e-09!12;UBERON:0004456!2.54e-09!12;UBERON:0005085!2.06e-08!13;UBERON:0002346!6.77e-08!71;UBERON:0003075!6.77e-08!71;UBERON:0007284!6.77e-08!71;UBERON:0003080!4.51e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.78e-28,9;UBERON:0000019,1.78e-28,9;UBERON:0000047,1.78e-28,9;UBERON:0010312,1.78e-28,9;UBERON:0004088,1.78e-28,9;UBERON:0002104,1.78e-28,9;UBERON:0001456,1.78e-28,9;UBERON:0003072,1.78e-28,9;UBERON:0004128,1.78e-28,9;UBERON:0003071,1.78e-28,9;UBERON:0001444,4.22e-23,11;UBERON:0000020,4.39e-21,12;UBERON:0001032,4.39e-21,12;UBERON:0004456,4.39e-21,12;UBERON:0003056,1.52e-20,49;UBERON:0000033,2.24e-19,13;UBERON:0005085,2.24e-19,13;UBERON:0000007,8.41e-17,8;UBERON:0003296,8.41e-17,8;UBERON:0010133,8.41e-17,8;UBERON:0002346,5.13e-15,64;UBERON:0003075,5.13e-15,64;UBERON:0007284,5.13e-15,64;UBERON:0004121,1.95e-13,95;UBERON:0000924,1.95e-13,95;UBERON:0006601,1.95e-13,95;UBERON:0001894,2.38e-13,10;UBERON:0006222,2.38e-13,10;UBERON:0010371,8.73e-13,73;UBERON:0010314,1.67e-09,92;UBERON:0000369,1.64e-07,5;UBERON:0002435,1.64e-07,5;UBERON:0000204,1.64e-07,5;UBERON:0010082,1.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.575072826109418,0,0,0.255374676170375,0.153606533256243,3.82470234417562,3.93396867490361,5.2091337055676,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.628271760564322,0,0,0.20778804455956,0.162241263067758,0,0,0,0.420883711772948,18.3469824577412,30.3470777852184,32.2311212351575,31.6480117455002,25.7177966792019,29.4661556655155,14.8048724804372,1.29351685369508,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,8.28281032544027,6.59729287292048,3.85806663056866,2.83744373827638,0.891844088010353,1.31639216481697,2.43571959291679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.412070114477788,1.28367683836726,0.252697211763798,0.50695859978048,0.565879024158229,0.749132059759059,0.384150914429216,0.689225627467359,0,0.463537303779422,0.964546102318525,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.752875043322645,0.338458431566706,1.28049581010941,0.526139422875686,0.543216455383447,0,0.237270036248348,0.197008964751127,0.818462086339379,0.929621047115796,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.575072826109418,0,0,0.255374676170375,0.153606533256243,3.82470234417562,3.93396867490361,5.2091337055676,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.628271760564322,0,0,0.20778804455956,0.162241263067758,0,0,0,0.420883711772948,18.3469824577412,30.3470777852184,32.2311212351575,31.6480117455002,25.7177966792019,29.4661556655155,14.8048724804372,1.29351685369508,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,8.28281032544027,6.59729287292048,3.85806663056866,2.83744373827638,0.891844088010353,1.31639216481697,2.43571959291679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.412070114477788,1.28367683836726,0.252697211763798,0.50695859978048,0.565879024158229,0.749132059759059,0.384150914429216,0.689225627467359,0,0.463537303779422,0.964546102318525,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.752875043322645,0.338458431566706,1.28049581010941,0.526139422875686,0.543216455383447,0,0.237270036248348,0.197008964751127,0.818462086339379,0.929621047115796,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0 | ||
|short_description=p1@ENSMUST00000162311 | |short_description=p1@ENSMUST00000162311 | ||
}} | }} |
Latest revision as of 10:45, 5 August 2015
Short description: | p1@ENSMUST00000162311 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000162311_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 196bp_to_ENSMUST00000162311_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.31e-12 | 3 |
striatum neuron | 3.30e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.78e-28 | 9 |
camera-type eye | 1.78e-28 | 9 |
simple eye | 1.78e-28 | 9 |
immature eye | 1.78e-28 | 9 |
ocular region | 1.78e-28 | 9 |
visual system | 1.78e-28 | 9 |
face | 1.78e-28 | 9 |
optic cup | 1.78e-28 | 9 |
optic vesicle | 1.78e-28 | 9 |
eye primordium | 1.78e-28 | 9 |
subdivision of head | 4.22e-23 | 11 |
sense organ | 4.39e-21 | 12 |
sensory system | 4.39e-21 | 12 |
entire sense organ system | 4.39e-21 | 12 |
pre-chordal neural plate | 1.52e-20 | 49 |
head | 2.24e-19 | 13 |
ectodermal placode | 2.24e-19 | 13 |
pituitary gland | 8.41e-17 | 8 |
gland of diencephalon | 8.41e-17 | 8 |
neuroendocrine gland | 8.41e-17 | 8 |
neurectoderm | 5.13e-15 | 64 |
neural plate | 5.13e-15 | 64 |
presumptive neural plate | 5.13e-15 | 64 |
ectoderm-derived structure | 1.95e-13 | 95 |
ectoderm | 1.95e-13 | 95 |
presumptive ectoderm | 1.95e-13 | 95 |
diencephalon | 2.38e-13 | 10 |
future diencephalon | 2.38e-13 | 10 |
ecto-epithelium | 8.73e-13 | 73 |
structure with developmental contribution from neural crest | 1.67e-09 | 92 |
corpus striatum | 1.64e-07 | 5 |
striatum | 1.64e-07 | 5 |
ventral part of telencephalon | 1.64e-07 | 5 |
future corpus striatum | 1.64e-07 | 5 |