FFCP PHASE1:Mm9::chr9:44817917..44817930,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12501|HGNC=|MCL_coexpression_id=33|UniProt=P22646,A6H6M1|association_with_transcript=-244bp_to_ENSMUST00000102832,NM_007648,uc009pez.1_5end|description=CAGE_peak_3_at_Cd3e_5end|id=chr9:44817917..44817930,-|ontology_enrichment_celltype=CL:0000791!3.78e-19!9;CL:0000789!3.78e-19!9;CL:0002420!3.78e-19!9;CL:0002419!3.78e-19!9;CL:0000790!3.78e-19!9;CL:0000624!3.53e-17!8;CL:0000084!2.57e-15!11;CL:0000827!2.57e-15!11;CL:0000838!7.02e-14!12;CL:0000893!6.39e-13!6;CL:0002489!6.39e-13!6;CL:0000898!6.39e-13!6;CL:0000809!6.39e-13!6;CL:0000810!6.39e-13!6;CL:0000895!6.39e-13!6;CL:0000808!6.39e-13!6;CL:0000894!6.39e-13!6;CL:0000806!6.39e-13!6;CL:0000807!6.39e-13!6;CL:0000805!6.39e-13!6;CL:0002425!6.39e-13!6;CL:0002436!6.39e-13!6;CL:0002427!6.39e-13!6;CL:0002428!6.39e-13!6;CL:0002429!6.39e-13!6;CL:0002433!6.39e-13!6;CL:0002431!6.39e-13!6;CL:0002432!6.39e-13!6;CL:0000542!1.15e-12!13;CL:0000051!1.15e-12!13;CL:0002031!3.93e-10!25;CL:0000738!3.05e-09!17;CL:0002087!3.05e-09!17;CL:0000988!2.49e-07!32;CL:0002032!2.49e-07!32;CL:0000037!2.49e-07!32;CL:0000566!2.49e-07!32;CL:0000837!2.49e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-14,9;CL:0000789,1.21e-14,9;CL:0002420,1.21e-14,9;CL:0002419,1.21e-14,9;CL:0000790,1.21e-14,9;CL:0000084,5.79e-12,11;CL:0000827,5.79e-12,11;CL:0000624,5.45e-11,8;CL:0000838,5.88e-11,12;CL:0000542,4.19e-10,13;CL:0000051,4.19e-10,13;CL:0000738,1.08e-07,17;CL:0002087,1.08e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.41e-32!23;UBERON:0000974!8.41e-32!23;UBERON:0004807!8.41e-32!23;UBERON:0005058!8.41e-32!23;UBERON:0003351!8.41e-32!23;UBERON:0009113!8.41e-32!23;UBERON:0003295!8.41e-32!23;UBERON:0009722!8.41e-32!23;UBERON:0005562!8.41e-32!23;UBERON:0007690!8.41e-32!23;UBERON:0006562!2.91e-30!24;UBERON:0003408!2.91e-30!24;UBERON:0001557!2.91e-30!24;UBERON:0001042!2.91e-30!24;UBERON:0008814!2.91e-30!24;UBERON:0009145!2.91e-30!24;UBERON:0004177!1.65e-29!29;UBERON:0000072!2.48e-26!27;UBERON:0000065!3.00e-23!41;UBERON:0002193!3.11e-23!48;UBERON:0002390!8.43e-23!45;UBERON:0003061!8.43e-23!45;UBERON:0001004!1.49e-22!42;UBERON:0000063!3.72e-19!35;UBERON:0005057!2.10e-14!51;UBERON:0002405!6.40e-14!70;UBERON:0005911!1.97e-11!69;UBERON:0003929!2.09e-10!55;UBERON:0003081!8.41e-10!88;UBERON:0001041!9.27e-10!92;UBERON:0002368!3.80e-09!60;UBERON:0000077!6.18e-09!97;UBERON:0002530!4.37e-08!65;UBERON:0000490!6.80e-08!66;UBERON:0004921!1.49e-07!126;UBERON:0004185!1.49e-07!126;UBERON:0001007!2.49e-07!128;UBERON:0001555!2.49e-07!128;UBERON:0007026!2.49e-07!128;UBERON:0000064!3.71e-07!99;UBERON:0004119!4.09e-07!130;UBERON:0000925!4.09e-07!130;UBERON:0006595!4.09e-07!130;UBERON:0000949!7.36e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.93e-36,23;UBERON:0000974,1.93e-36,23;UBERON:0004807,1.93e-36,23;UBERON:0005058,1.93e-36,23;UBERON:0003351,1.93e-36,23;UBERON:0009113,1.93e-36,23;UBERON:0003295,1.93e-36,23;UBERON:0009722,1.93e-36,23;UBERON:0005562,1.93e-36,23;UBERON:0007690,1.93e-36,23;UBERON:0006562,7.45e-35,24;UBERON:0003408,7.45e-35,24;UBERON:0001557,7.45e-35,24;UBERON:0001042,7.45e-35,24;UBERON:0008814,7.45e-35,24;UBERON:0009145,7.45e-35,24;UBERON:0000072,8.45e-31,27;UBERON:0004177,1.46e-28,29;UBERON:0005057,1.46e-28,29;UBERON:0000077,2.24e-23,35;UBERON:0007811,1.12e-22,36;UBERON:0000065,1.06e-19,41;UBERON:0002193,1.69e-19,48;UBERON:0002405,1.69e-19,48;UBERON:0001004,3.43e-19,42;UBERON:0000153,1.05e-18,43;UBERON:0002390,8.55e-18,45;UBERON:0003061,8.55e-18,45;UBERON:0003929,3.11e-14,55;UBERON:0002368,6.79e-13,60;UBERON:0002530,9.24e-12,65;UBERON:0000490,1.49e-11,66;UBERON:0005911,5.69e-11,69;UBERON:0000949,1.95e-10,72;UBERON:0001041,3.34e-09,80;UBERON:0003081,2.62e-08,87;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.703943610758334,0.468129052643987,0.513653904676515,0.239316476986009,3.59521532855532,1.66098764596095,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.419437377702843,0.483168241652012,0,1.26404448251271,0,0.513554785824136,0.389762468933385,1.79026695667481,1.19208812868759,1.20195449519969,2.06765338044408,2.42319479875554,2.209997392995,1.81487133246313,2.53390489923356,2.11666051608725,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p3@Cd3e}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12501 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P22646,uniprot:A6H6M1 | |||
|association_with_transcript=-244bp_to_ENSMUST00000102832,NM_007648,uc009pez.1_5end | |||
|cluster_id=chr9:44817917..44817930,- | |||
|description=CAGE_peak_3_at_Cd3e_5end | |||
|id=chr9:44817917..44817930,- | |||
|ontology_enrichment_celltype=CL:0000791!3.78e-19!9;CL:0000789!3.78e-19!9;CL:0002420!3.78e-19!9;CL:0002419!3.78e-19!9;CL:0000790!3.78e-19!9;CL:0000624!3.53e-17!8;CL:0000084!2.57e-15!11;CL:0000827!2.57e-15!11;CL:0000838!7.02e-14!12;CL:0000893!6.39e-13!6;CL:0002489!6.39e-13!6;CL:0000898!6.39e-13!6;CL:0000809!6.39e-13!6;CL:0000810!6.39e-13!6;CL:0000895!6.39e-13!6;CL:0000808!6.39e-13!6;CL:0000894!6.39e-13!6;CL:0000806!6.39e-13!6;CL:0000807!6.39e-13!6;CL:0000805!6.39e-13!6;CL:0002425!6.39e-13!6;CL:0002436!6.39e-13!6;CL:0002427!6.39e-13!6;CL:0002428!6.39e-13!6;CL:0002429!6.39e-13!6;CL:0002433!6.39e-13!6;CL:0002431!6.39e-13!6;CL:0002432!6.39e-13!6;CL:0000542!1.15e-12!13;CL:0000051!1.15e-12!13;CL:0002031!3.93e-10!25;CL:0000738!3.05e-09!17;CL:0002087!3.05e-09!17;CL:0000988!2.49e-07!32;CL:0002032!2.49e-07!32;CL:0000037!2.49e-07!32;CL:0000566!2.49e-07!32;CL:0000837!2.49e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-14,9;CL:0000789,1.21e-14,9;CL:0002420,1.21e-14,9;CL:0002419,1.21e-14,9;CL:0000790,1.21e-14,9;CL:0000084,5.79e-12,11;CL:0000827,5.79e-12,11;CL:0000624,5.45e-11,8;CL:0000838,5.88e-11,12;CL:0000542,4.19e-10,13;CL:0000051,4.19e-10,13;CL:0000738,1.08e-07,17;CL:0002087,1.08e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.41e-32!23;UBERON:0000974!8.41e-32!23;UBERON:0004807!8.41e-32!23;UBERON:0005058!8.41e-32!23;UBERON:0003351!8.41e-32!23;UBERON:0009113!8.41e-32!23;UBERON:0003295!8.41e-32!23;UBERON:0009722!8.41e-32!23;UBERON:0005562!8.41e-32!23;UBERON:0007690!8.41e-32!23;UBERON:0006562!2.91e-30!24;UBERON:0003408!2.91e-30!24;UBERON:0001557!2.91e-30!24;UBERON:0001042!2.91e-30!24;UBERON:0008814!2.91e-30!24;UBERON:0009145!2.91e-30!24;UBERON:0004177!1.65e-29!29;UBERON:0000072!2.48e-26!27;UBERON:0000065!3.00e-23!41;UBERON:0002193!3.11e-23!48;UBERON:0002390!8.43e-23!45;UBERON:0003061!8.43e-23!45;UBERON:0001004!1.49e-22!42;UBERON:0000063!3.72e-19!35;UBERON:0005057!2.10e-14!51;UBERON:0002405!6.40e-14!70;UBERON:0005911!1.97e-11!69;UBERON:0003929!2.09e-10!55;UBERON:0003081!8.41e-10!88;UBERON:0001041!9.27e-10!92;UBERON:0002368!3.80e-09!60;UBERON:0000077!6.18e-09!97;UBERON:0002530!4.37e-08!65;UBERON:0000490!6.80e-08!66;UBERON:0004921!1.49e-07!126;UBERON:0004185!1.49e-07!126;UBERON:0001007!2.49e-07!128;UBERON:0001555!2.49e-07!128;UBERON:0007026!2.49e-07!128;UBERON:0000064!3.71e-07!99;UBERON:0004119!4.09e-07!130;UBERON:0000925!4.09e-07!130;UBERON:0006595!4.09e-07!130;UBERON:0000949!7.36e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.93e-36,23;UBERON:0000974,1.93e-36,23;UBERON:0004807,1.93e-36,23;UBERON:0005058,1.93e-36,23;UBERON:0003351,1.93e-36,23;UBERON:0009113,1.93e-36,23;UBERON:0003295,1.93e-36,23;UBERON:0009722,1.93e-36,23;UBERON:0005562,1.93e-36,23;UBERON:0007690,1.93e-36,23;UBERON:0006562,7.45e-35,24;UBERON:0003408,7.45e-35,24;UBERON:0001557,7.45e-35,24;UBERON:0001042,7.45e-35,24;UBERON:0008814,7.45e-35,24;UBERON:0009145,7.45e-35,24;UBERON:0000072,8.45e-31,27;UBERON:0004177,1.46e-28,29;UBERON:0005057,1.46e-28,29;UBERON:0000077,2.24e-23,35;UBERON:0007811,1.12e-22,36;UBERON:0000065,1.06e-19,41;UBERON:0002193,1.69e-19,48;UBERON:0002405,1.69e-19,48;UBERON:0001004,3.43e-19,42;UBERON:0000153,1.05e-18,43;UBERON:0002390,8.55e-18,45;UBERON:0003061,8.55e-18,45;UBERON:0003929,3.11e-14,55;UBERON:0002368,6.79e-13,60;UBERON:0002530,9.24e-12,65;UBERON:0000490,1.49e-11,66;UBERON:0005911,5.69e-11,69;UBERON:0000949,1.95e-10,72;UBERON:0001041,3.34e-09,80;UBERON:0003081,2.62e-08,87;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.703943610758334,0.468129052643987,0.513653904676515,0.239316476986009,3.59521532855532,1.66098764596095,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.36619248741323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.419437377702843,0.483168241652012,0,1.26404448251271,0,0.513554785824136,0.389762468933385,1.79026695667481,1.19208812868759,1.20195449519969,2.06765338044408,2.42319479875554,2.209997392995,1.81487133246313,2.53390489923356,2.11666051608725,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Cd3e | |||
}} |
Revision as of 04:36, 5 August 2015
Short description: | p3@Cd3e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd3e_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -244bp_to_ENSMUST00000102832, NM_007648, uc009pez.1_5end |
EntrezGene: | 12501 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.21e-14 | 9 |
alpha-beta T cell | 1.21e-14 | 9 |
immature T cell | 1.21e-14 | 9 |
mature T cell | 1.21e-14 | 9 |
immature alpha-beta T cell | 1.21e-14 | 9 |
T cell | 5.79e-12 | 11 |
pro-T cell | 5.79e-12 | 11 |
CD4-positive, alpha-beta T cell | 5.45e-11 | 8 |
lymphoid lineage restricted progenitor cell | 5.88e-11 | 12 |
lymphocyte | 4.19e-10 | 13 |
common lymphoid progenitor | 4.19e-10 | 13 |
leukocyte | 1.08e-07 | 17 |
nongranular leukocyte | 1.08e-07 | 17 |