FFCP PHASE1:Mm9::chr6:125186972..125186989,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21940|HGNC=|MCL_coexpression_id=33|UniProt=B7ZW87|association_with_transcript=-1bp_to_ENSMUST00000112282_5end|description=CAGE_peak_3_at_Cd27_5end|id=chr6:125186972..125186989,-|ontology_enrichment_celltype=CL:0000084!1.01e-10!11;CL:0000827!1.01e-10!11;CL:0000988!5.44e-10!32;CL:0002032!5.44e-10!32;CL:0000037!5.44e-10!32;CL:0000566!5.44e-10!32;CL:0000837!5.44e-10!32;CL:0000838!1.97e-09!12;CL:0000791!3.00e-09!9;CL:0000789!3.00e-09!9;CL:0002420!3.00e-09!9;CL:0002419!3.00e-09!9;CL:0000790!3.00e-09!9;CL:0000624!2.24e-08!8;CL:0000542!2.36e-08!13;CL:0000051!2.36e-08!13;CL:0002031!2.24e-07!25;CL:0000893!9.67e-07!6;CL:0002489!9.67e-07!6;CL:0000898!9.67e-07!6;CL:0000809!9.67e-07!6;CL:0000810!9.67e-07!6;CL:0000895!9.67e-07!6;CL:0000808!9.67e-07!6;CL:0000894!9.67e-07!6;CL:0000806!9.67e-07!6;CL:0000807!9.67e-07!6;CL:0000805!9.67e-07!6;CL:0002425!9.67e-07!6;CL:0002436!9.67e-07!6;CL:0002427!9.67e-07!6;CL:0002428!9.67e-07!6;CL:0002429!9.67e-07!6;CL:0002433!9.67e-07!6;CL:0002431!9.67e-07!6;CL:0002432!9.67e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,3.70e-20,11;CL:0000827,3.70e-20,11;CL:0000838,3.10e-18,12;CL:0000791,3.64e-17,9;CL:0000789,3.64e-17,9;CL:0002420,3.64e-17,9;CL:0002419,3.64e-17,9;CL:0000790,3.64e-17,9;CL:0000542,1.31e-16,13;CL:0000051,1.31e-16,13;CL:0000988,4.04e-16,32;CL:0002032,4.04e-16,32;CL:0000037,4.04e-16,32;CL:0000837,4.04e-16,32;CL:0000624,2.15e-15,8;CL:0000893,4.34e-12,6;CL:0002489,4.34e-12,6;CL:0000898,4.34e-12,6;CL:0000809,4.34e-12,6;CL:0000810,4.34e-12,6;CL:0000895,4.34e-12,6;CL:0000808,4.34e-12,6;CL:0000894,4.34e-12,6;CL:0000806,4.34e-12,6;CL:0000807,4.34e-12,6;CL:0000805,4.34e-12,6;CL:0002425,4.34e-12,6;CL:0002436,4.34e-12,6;CL:0002427,4.34e-12,6;CL:0002428,4.34e-12,6;CL:0002429,4.34e-12,6;CL:0002433,4.34e-12,6;CL:0002431,4.34e-12,6;CL:0002432,4.34e-12,6;CL:0000738,4.94e-12,17;CL:0002087,4.94e-12,17;CL:0002031,5.48e-12,25;CL:0002320,1.09e-09,46;CL:0000134,1.09e-09,46;CL:0000219,1.49e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.22e-17!48;UBERON:0004177!1.21e-16!29;UBERON:0002390!2.36e-16!45;UBERON:0003061!2.36e-16!45;UBERON:0003408!1.76e-15!24;UBERON:0002370!6.55e-15!23;UBERON:0000974!6.55e-15!23;UBERON:0004807!6.55e-15!23;UBERON:0005058!6.55e-15!23;UBERON:0003351!6.55e-15!23;UBERON:0009113!6.55e-15!23;UBERON:0003295!6.55e-15!23;UBERON:0009722!6.55e-15!23;UBERON:0005562!6.55e-15!23;UBERON:0007690!6.55e-15!23;UBERON:0006562!6.72e-14!24;UBERON:0001557!6.72e-14!24;UBERON:0001042!6.72e-14!24;UBERON:0008814!6.72e-14!24;UBERON:0009145!6.72e-14!24;UBERON:0001004!3.29e-13!42;UBERON:0000065!1.15e-12!41;UBERON:0000072!2.39e-11!27;UBERON:0002405!3.11e-11!70;UBERON:0005057!3.29e-09!51;UBERON:0000063!1.39e-07!35;UBERON:0003081!5.46e-07!88;UBERON:0005911!9.09e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.57e-33,29;UBERON:0005057,3.57e-33,29;UBERON:0003408,7.29e-32,24;UBERON:0002370,1.06e-30,23;UBERON:0000974,1.06e-30,23;UBERON:0004807,1.06e-30,23;UBERON:0005058,1.06e-30,23;UBERON:0003351,1.06e-30,23;UBERON:0009113,1.06e-30,23;UBERON:0003295,1.06e-30,23;UBERON:0009722,1.06e-30,23;UBERON:0005562,1.06e-30,23;UBERON:0007690,1.06e-30,23;UBERON:0006562,3.60e-29,24;UBERON:0001557,3.60e-29,24;UBERON:0001042,3.60e-29,24;UBERON:0008814,3.60e-29,24;UBERON:0009145,3.60e-29,24;UBERON:0002390,1.91e-28,45;UBERON:0003061,1.91e-28,45;UBERON:0002193,2.50e-28,48;UBERON:0002405,2.50e-28,48;UBERON:0000077,2.77e-26,35;UBERON:0000072,2.90e-25,27;UBERON:0001004,2.48e-22,42;UBERON:0000065,2.86e-21,41;UBERON:0007811,3.50e-19,36;UBERON:0000153,4.43e-15,43;UBERON:0001041,2.67e-12,80;UBERON:0003081,6.66e-11,87;UBERON:0005911,5.88e-10,69;UBERON:0002384,1.09e-09,46;UBERON:0003929,1.64e-09,55;UBERON:0002368,2.82e-08,60;UBERON:0002530,4.75e-08,65;UBERON:0004921,4.07e-07,114;UBERON:0000490,4.68e-07,66;UBERON:0001007,7.20e-07,116;UBERON:0001555,7.20e-07,116;UBERON:0007026,7.20e-07,116|phase1_expression=0,0,0,0,0,0,0,37.5748871214987,75.603543795445,124.990457055945,58.8989810695737,50.735093121034,54.099430658261,70.8105259593879,0.999329285446988,2.42970320867791,0.699561878128147,5.36285681109004,5.21034847701807,0.84877930359606,1.53077922271926,11.2198774857,13.3211892460857,0.319984845586813,0,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,60.2050577869416,70.5796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.02765491747154,34.697676408721,0.593768556259299,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,2.75574786363617,1.79970819298022,3.68503658511888,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0.700592054203017,0,0.164167464079095,0.0810688095458557,0.730999937126662,0.219550115291051,0.134206418760372,0,0,2.31293148088659,0,0,0,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,2.95605104266567,0,0,0,0,1.50755631697634,0.476087281772027,0,1.7339865851681,1.55025282754142,0.637819074629948,0.81931657357869,0.863424909329478,0.867894351489069,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,3.07567585436135,0,0.185194527369712,1.31857919903284,3.00727300986255,2.28778173206523,4.58941760983409,4.75834937900437,3.73139929271944,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0,0,0,0,108.707825496093,4.45995473638361,13.4551353885924,29.7518684619151,45.4727806995403,58.6109996604731,48.7993525051074,57.8942946524343,57.8537758202886,54.3354531450149,70.8808081511989,75.2374839310889,75.1414483210973,88.943322560174,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0,0.952587382566147,0.463537303779422,0.38581844092741,1.23625770240992,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,1.28922632428979,0,0,0|short_description=p3@Cd27}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21940 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZW87 | |||
|association_with_transcript=-1bp_to_ENSMUST00000112282_5end | |||
|cluster_id=chr6:125186972..125186989,- | |||
|description=CAGE_peak_3_at_Cd27_5end | |||
|id=chr6:125186972..125186989,- | |||
|ontology_enrichment_celltype=CL:0000084!1.01e-10!11;CL:0000827!1.01e-10!11;CL:0000988!5.44e-10!32;CL:0002032!5.44e-10!32;CL:0000037!5.44e-10!32;CL:0000566!5.44e-10!32;CL:0000837!5.44e-10!32;CL:0000838!1.97e-09!12;CL:0000791!3.00e-09!9;CL:0000789!3.00e-09!9;CL:0002420!3.00e-09!9;CL:0002419!3.00e-09!9;CL:0000790!3.00e-09!9;CL:0000624!2.24e-08!8;CL:0000542!2.36e-08!13;CL:0000051!2.36e-08!13;CL:0002031!2.24e-07!25;CL:0000893!9.67e-07!6;CL:0002489!9.67e-07!6;CL:0000898!9.67e-07!6;CL:0000809!9.67e-07!6;CL:0000810!9.67e-07!6;CL:0000895!9.67e-07!6;CL:0000808!9.67e-07!6;CL:0000894!9.67e-07!6;CL:0000806!9.67e-07!6;CL:0000807!9.67e-07!6;CL:0000805!9.67e-07!6;CL:0002425!9.67e-07!6;CL:0002436!9.67e-07!6;CL:0002427!9.67e-07!6;CL:0002428!9.67e-07!6;CL:0002429!9.67e-07!6;CL:0002433!9.67e-07!6;CL:0002431!9.67e-07!6;CL:0002432!9.67e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.70e-20,11;CL:0000827,3.70e-20,11;CL:0000838,3.10e-18,12;CL:0000791,3.64e-17,9;CL:0000789,3.64e-17,9;CL:0002420,3.64e-17,9;CL:0002419,3.64e-17,9;CL:0000790,3.64e-17,9;CL:0000542,1.31e-16,13;CL:0000051,1.31e-16,13;CL:0000988,4.04e-16,32;CL:0002032,4.04e-16,32;CL:0000037,4.04e-16,32;CL:0000837,4.04e-16,32;CL:0000624,2.15e-15,8;CL:0000893,4.34e-12,6;CL:0002489,4.34e-12,6;CL:0000898,4.34e-12,6;CL:0000809,4.34e-12,6;CL:0000810,4.34e-12,6;CL:0000895,4.34e-12,6;CL:0000808,4.34e-12,6;CL:0000894,4.34e-12,6;CL:0000806,4.34e-12,6;CL:0000807,4.34e-12,6;CL:0000805,4.34e-12,6;CL:0002425,4.34e-12,6;CL:0002436,4.34e-12,6;CL:0002427,4.34e-12,6;CL:0002428,4.34e-12,6;CL:0002429,4.34e-12,6;CL:0002433,4.34e-12,6;CL:0002431,4.34e-12,6;CL:0002432,4.34e-12,6;CL:0000738,4.94e-12,17;CL:0002087,4.94e-12,17;CL:0002031,5.48e-12,25;CL:0002320,1.09e-09,46;CL:0000134,1.09e-09,46;CL:0000219,1.49e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.22e-17!48;UBERON:0004177!1.21e-16!29;UBERON:0002390!2.36e-16!45;UBERON:0003061!2.36e-16!45;UBERON:0003408!1.76e-15!24;UBERON:0002370!6.55e-15!23;UBERON:0000974!6.55e-15!23;UBERON:0004807!6.55e-15!23;UBERON:0005058!6.55e-15!23;UBERON:0003351!6.55e-15!23;UBERON:0009113!6.55e-15!23;UBERON:0003295!6.55e-15!23;UBERON:0009722!6.55e-15!23;UBERON:0005562!6.55e-15!23;UBERON:0007690!6.55e-15!23;UBERON:0006562!6.72e-14!24;UBERON:0001557!6.72e-14!24;UBERON:0001042!6.72e-14!24;UBERON:0008814!6.72e-14!24;UBERON:0009145!6.72e-14!24;UBERON:0001004!3.29e-13!42;UBERON:0000065!1.15e-12!41;UBERON:0000072!2.39e-11!27;UBERON:0002405!3.11e-11!70;UBERON:0005057!3.29e-09!51;UBERON:0000063!1.39e-07!35;UBERON:0003081!5.46e-07!88;UBERON:0005911!9.09e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.57e-33,29;UBERON:0005057,3.57e-33,29;UBERON:0003408,7.29e-32,24;UBERON:0002370,1.06e-30,23;UBERON:0000974,1.06e-30,23;UBERON:0004807,1.06e-30,23;UBERON:0005058,1.06e-30,23;UBERON:0003351,1.06e-30,23;UBERON:0009113,1.06e-30,23;UBERON:0003295,1.06e-30,23;UBERON:0009722,1.06e-30,23;UBERON:0005562,1.06e-30,23;UBERON:0007690,1.06e-30,23;UBERON:0006562,3.60e-29,24;UBERON:0001557,3.60e-29,24;UBERON:0001042,3.60e-29,24;UBERON:0008814,3.60e-29,24;UBERON:0009145,3.60e-29,24;UBERON:0002390,1.91e-28,45;UBERON:0003061,1.91e-28,45;UBERON:0002193,2.50e-28,48;UBERON:0002405,2.50e-28,48;UBERON:0000077,2.77e-26,35;UBERON:0000072,2.90e-25,27;UBERON:0001004,2.48e-22,42;UBERON:0000065,2.86e-21,41;UBERON:0007811,3.50e-19,36;UBERON:0000153,4.43e-15,43;UBERON:0001041,2.67e-12,80;UBERON:0003081,6.66e-11,87;UBERON:0005911,5.88e-10,69;UBERON:0002384,1.09e-09,46;UBERON:0003929,1.64e-09,55;UBERON:0002368,2.82e-08,60;UBERON:0002530,4.75e-08,65;UBERON:0004921,4.07e-07,114;UBERON:0000490,4.68e-07,66;UBERON:0001007,7.20e-07,116;UBERON:0001555,7.20e-07,116;UBERON:0007026,7.20e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,37.5748871214987,75.603543795445,124.990457055945,58.8989810695737,50.735093121034,54.099430658261,70.8105259593879,0.999329285446988,2.42970320867791,0.699561878128147,5.36285681109004,5.21034847701807,0.84877930359606,1.53077922271926,11.2198774857,13.3211892460857,0.319984845586813,0,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,60.2050577869416,70.5796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.02765491747154,34.697676408721,0.593768556259299,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,2.75574786363617,1.79970819298022,3.68503658511888,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0.700592054203017,0,0.164167464079095,0.0810688095458557,0.730999937126662,0.219550115291051,0.134206418760372,0,0,2.31293148088659,0,0,0,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,2.95605104266567,0,0,0,0,1.50755631697634,0.476087281772027,0,1.7339865851681,1.55025282754142,0.637819074629948,0.81931657357869,0.863424909329478,0.867894351489069,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,3.07567585436135,0,0.185194527369712,1.31857919903284,3.00727300986255,2.28778173206523,4.58941760983409,4.75834937900437,3.73139929271944,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0,0,0,0,108.707825496093,4.45995473638361,13.4551353885924,29.7518684619151,45.4727806995403,58.6109996604731,48.7993525051074,57.8942946524343,57.8537758202886,54.3354531450149,70.8808081511989,75.2374839310889,75.1414483210973,88.943322560174,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0,0.952587382566147,0.463537303779422,0.38581844092741,1.23625770240992,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,1.28922632428979,0,0,0 | |||
|short_description=p3@Cd27 | |||
}} |
Revision as of 04:12, 5 August 2015
Short description: | p3@Cd27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd27_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -1bp_to_ENSMUST00000112282_5end |
EntrezGene: | 21940 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data