FFCP PHASE1:Mm9::chr2:31938824..31938850,-: Difference between revisions
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{{FFCP|EntrezGene=241303|HGNC=|MCL_coexpression_id=33|UniProt=A2ATN4,Q8C552|association_with_transcript=374bp_to_NM_175511,uc008jek.1_5end|description=CAGE_peak_4_at_Fam78a_5end|id=chr2:31938824..31938850,-|ontology_enrichment_celltype=CL:0000542!9.63e-07!13;CL:0000051!9.63e-07!13|ontology_enrichment_celltype_v019_2=CL:0000084,7.57e-11,11;CL:0000827,7.57e-11,11;CL:0000791,3.63e-10,9;CL:0000789,3.63e-10,9;CL:0002420,3.63e-10,9;CL:0002419,3.63e-10,9;CL:0000790,3.63e-10,9;CL:0000838,7.42e-10,12;CL:0000542,5.12e-09,13;CL:0000051,5.12e-09,13;CL:0000738,1.60e-08,17;CL:0002087,1.60e-08,17;CL:0002031,2.11e-08,25;CL:0000624,3.96e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.84e-12!48;UBERON:0004177!7.90e-12!29;UBERON:0002370!8.23e-11!23;UBERON:0000974!8.23e-11!23;UBERON:0004807!8.23e-11!23;UBERON:0005058!8.23e-11!23;UBERON:0003351!8.23e-11!23;UBERON:0009113!8.23e-11!23;UBERON:0003295!8.23e-11!23;UBERON:0009722!8.23e-11!23;UBERON:0005562!8.23e-11!23;UBERON:0007690!8.23e-11!23;UBERON:0002390!1.00e-10!45;UBERON:0003061!1.00e-10!45;UBERON:0003081!3.01e-10!88;UBERON:0006562!5.80e-10!24;UBERON:0003408!5.80e-10!24;UBERON:0001557!5.80e-10!24;UBERON:0001042!5.80e-10!24;UBERON:0008814!5.80e-10!24;UBERON:0009145!5.80e-10!24;UBERON:0002405!3.98e-09!70;UBERON:0000065!1.10e-08!41;UBERON:0001004!3.39e-08!42;UBERON:0000072!7.56e-08!27;UBERON:0005057!7.92e-08!51;UBERON:0005911!1.48e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.77e-30,23;UBERON:0000974,1.77e-30,23;UBERON:0004807,1.77e-30,23;UBERON:0005058,1.77e-30,23;UBERON:0003351,1.77e-30,23;UBERON:0009113,1.77e-30,23;UBERON:0003295,1.77e-30,23;UBERON:0009722,1.77e-30,23;UBERON:0005562,1.77e-30,23;UBERON:0007690,1.77e-30,23;UBERON:0006562,4.88e-29,24;UBERON:0003408,4.88e-29,24;UBERON:0001557,4.88e-29,24;UBERON:0001042,4.88e-29,24;UBERON:0008814,4.88e-29,24;UBERON:0009145,4.88e-29,24;UBERON:0004177,3.27e-26,29;UBERON:0005057,3.27e-26,29;UBERON:0000072,2.34e-25,27;UBERON:0002193,7.05e-22,48;UBERON:0002405,7.05e-22,48;UBERON:0002390,2.11e-21,45;UBERON:0003061,2.11e-21,45;UBERON:0000077,5.60e-21,35;UBERON:0007811,5.36e-18,36;UBERON:0000065,2.62e-15,41;UBERON:0001004,7.55e-15,42;UBERON:0000153,2.07e-14,43;UBERON:0003081,6.59e-12,87;UBERON:0003929,9.72e-12,55;UBERON:0002368,3.31e-09,60;UBERON:0000490,4.31e-09,66;UBERON:0005911,1.61e-08,69;UBERON:0002530,3.35e-08,65;UBERON:0000926,5.02e-08,120;UBERON:0004120,5.02e-08,120;UBERON:0006603,5.02e-08,120;UBERON:0004921,6.73e-08,114;UBERON:0001007,1.14e-07,116;UBERON:0001555,1.14e-07,116;UBERON:0007026,1.14e-07,116;UBERON:0004119,1.89e-07,118;UBERON:0000925,1.89e-07,118;UBERON:0006595,1.89e-07,118;UBERON:0000949,4.91e-07,72;UBERON:0001041,7.80e-07,80|phase1_expression=0,0.348975407639361,0.909998478779072,1.20985684522732,0.500895729946347,0.16787927191189,0,5.29405626110463,0.281577444303333,1.17032263160997,0.34243593645101,0.159544317990673,8.04643430676667,9.09172185157573,0.333109761815663,0.404950534779652,0,2.20823515750766,1.7824876368746,0,0.340173160604279,1.58865521921416,0.261199789138935,0.319984845586813,0.45881856213434,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,5.37750078627942,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.27728527604296,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,1.24275463521301,0.703578179943289,0.180062061461015,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,1.05088808130453,1.15191894939436,0.164167464079095,0.729619285912702,0.584799949701329,0.439100230582101,0.268412837520744,0,0,3.30418782983798,1.58670339998127,0.426576501070468,0,0,0.403367049246685,0,0.570676878337677,2.37264530772256,1.31759163779209,0.251335208800269,0.994782360205754,0.58489226135736,0,0.432276099749388,0.796565093017469,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0,0,0.156998727841375,0,0,0.500535317148282,0.786235980452812,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0,0,0.119372344003136,0,0.582961673259701,0,1.70870880797853,0.206386867963223,0,0.376736914009382,0.820165366326151,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,2.25477175473676,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0,0,0.288030006257865,4.74016680942267,1.62180172232131,1.1298205288131,3.37794139742267,4.29664069601955,5.56307793387542,6.85114062263822,7.97523446742717,8.17828244579996,6.70619898563999,6.04957110821043,9.64833019323549,8.37043022270866,10.9864288050675,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0.685738504770831,0.354951612318675,0,0.290692833264657,0,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p4@Fam78a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241303 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ATN4,uniprot:Q8C552 | |||
|association_with_transcript=374bp_to_NM_175511,uc008jek.1_5end | |||
|cluster_id=chr2:31938824..31938850,- | |||
|description=CAGE_peak_4_at_Fam78a_5end | |||
|id=chr2:31938824..31938850,- | |||
|ontology_enrichment_celltype=CL:0000542!9.63e-07!13;CL:0000051!9.63e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.57e-11,11;CL:0000827,7.57e-11,11;CL:0000791,3.63e-10,9;CL:0000789,3.63e-10,9;CL:0002420,3.63e-10,9;CL:0002419,3.63e-10,9;CL:0000790,3.63e-10,9;CL:0000838,7.42e-10,12;CL:0000542,5.12e-09,13;CL:0000051,5.12e-09,13;CL:0000738,1.60e-08,17;CL:0002087,1.60e-08,17;CL:0002031,2.11e-08,25;CL:0000624,3.96e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.84e-12!48;UBERON:0004177!7.90e-12!29;UBERON:0002370!8.23e-11!23;UBERON:0000974!8.23e-11!23;UBERON:0004807!8.23e-11!23;UBERON:0005058!8.23e-11!23;UBERON:0003351!8.23e-11!23;UBERON:0009113!8.23e-11!23;UBERON:0003295!8.23e-11!23;UBERON:0009722!8.23e-11!23;UBERON:0005562!8.23e-11!23;UBERON:0007690!8.23e-11!23;UBERON:0002390!1.00e-10!45;UBERON:0003061!1.00e-10!45;UBERON:0003081!3.01e-10!88;UBERON:0006562!5.80e-10!24;UBERON:0003408!5.80e-10!24;UBERON:0001557!5.80e-10!24;UBERON:0001042!5.80e-10!24;UBERON:0008814!5.80e-10!24;UBERON:0009145!5.80e-10!24;UBERON:0002405!3.98e-09!70;UBERON:0000065!1.10e-08!41;UBERON:0001004!3.39e-08!42;UBERON:0000072!7.56e-08!27;UBERON:0005057!7.92e-08!51;UBERON:0005911!1.48e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.77e-30,23;UBERON:0000974,1.77e-30,23;UBERON:0004807,1.77e-30,23;UBERON:0005058,1.77e-30,23;UBERON:0003351,1.77e-30,23;UBERON:0009113,1.77e-30,23;UBERON:0003295,1.77e-30,23;UBERON:0009722,1.77e-30,23;UBERON:0005562,1.77e-30,23;UBERON:0007690,1.77e-30,23;UBERON:0006562,4.88e-29,24;UBERON:0003408,4.88e-29,24;UBERON:0001557,4.88e-29,24;UBERON:0001042,4.88e-29,24;UBERON:0008814,4.88e-29,24;UBERON:0009145,4.88e-29,24;UBERON:0004177,3.27e-26,29;UBERON:0005057,3.27e-26,29;UBERON:0000072,2.34e-25,27;UBERON:0002193,7.05e-22,48;UBERON:0002405,7.05e-22,48;UBERON:0002390,2.11e-21,45;UBERON:0003061,2.11e-21,45;UBERON:0000077,5.60e-21,35;UBERON:0007811,5.36e-18,36;UBERON:0000065,2.62e-15,41;UBERON:0001004,7.55e-15,42;UBERON:0000153,2.07e-14,43;UBERON:0003081,6.59e-12,87;UBERON:0003929,9.72e-12,55;UBERON:0002368,3.31e-09,60;UBERON:0000490,4.31e-09,66;UBERON:0005911,1.61e-08,69;UBERON:0002530,3.35e-08,65;UBERON:0000926,5.02e-08,120;UBERON:0004120,5.02e-08,120;UBERON:0006603,5.02e-08,120;UBERON:0004921,6.73e-08,114;UBERON:0001007,1.14e-07,116;UBERON:0001555,1.14e-07,116;UBERON:0007026,1.14e-07,116;UBERON:0004119,1.89e-07,118;UBERON:0000925,1.89e-07,118;UBERON:0006595,1.89e-07,118;UBERON:0000949,4.91e-07,72;UBERON:0001041,7.80e-07,80 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,1.20985684522732,0.500895729946347,0.16787927191189,0,5.29405626110463,0.281577444303333,1.17032263160997,0.34243593645101,0.159544317990673,8.04643430676667,9.09172185157573,0.333109761815663,0.404950534779652,0,2.20823515750766,1.7824876368746,0,0.340173160604279,1.58865521921416,0.261199789138935,0.319984845586813,0.45881856213434,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,5.37750078627942,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.27728527604296,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,1.24275463521301,0.703578179943289,0.180062061461015,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,1.05088808130453,1.15191894939436,0.164167464079095,0.729619285912702,0.584799949701329,0.439100230582101,0.268412837520744,0,0,3.30418782983798,1.58670339998127,0.426576501070468,0,0,0.403367049246685,0,0.570676878337677,2.37264530772256,1.31759163779209,0.251335208800269,0.994782360205754,0.58489226135736,0,0.432276099749388,0.796565093017469,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0,0,0.156998727841375,0,0,0.500535317148282,0.786235980452812,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0,0,0.119372344003136,0,0.582961673259701,0,1.70870880797853,0.206386867963223,0,0.376736914009382,0.820165366326151,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,2.25477175473676,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0,0,0.288030006257865,4.74016680942267,1.62180172232131,1.1298205288131,3.37794139742267,4.29664069601955,5.56307793387542,6.85114062263822,7.97523446742717,8.17828244579996,6.70619898563999,6.04957110821043,9.64833019323549,8.37043022270866,10.9864288050675,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0.685738504770831,0.354951612318675,0,0.290692833264657,0,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p4@Fam78a | |||
}} |
Revision as of 01:01, 5 August 2015
Short description: | p4@Fam78a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam78a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 374bp_to_NM_175511, uc008jek.1_5end |
EntrezGene: | 241303 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.57e-11 | 11 |
pro-T cell | 7.57e-11 | 11 |
mature alpha-beta T cell | 3.63e-10 | 9 |
alpha-beta T cell | 3.63e-10 | 9 |
immature T cell | 3.63e-10 | 9 |
mature T cell | 3.63e-10 | 9 |
immature alpha-beta T cell | 3.63e-10 | 9 |
lymphoid lineage restricted progenitor cell | 7.42e-10 | 12 |
lymphocyte | 5.12e-09 | 13 |
common lymphoid progenitor | 5.12e-09 | 13 |
leukocyte | 1.60e-08 | 17 |
nongranular leukocyte | 1.60e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 2.11e-08 | 25 |
CD4-positive, alpha-beta T cell | 3.96e-08 | 8 |