FFCP PHASE1:Mm9::chr15:100058266..100058287,+: Difference between revisions
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{{FFCP|EntrezGene=11908|HGNC=|UniProt=P81269,Q9CWS2|association_with_transcript=-2bp_to_NM_007497,uc007xqs.1_5end|description=CAGE_peak_1_at_Atf1_5end|id=chr15:100058266..100058287,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.41e-23!193;UBERON:0004120!4.41e-23!193;UBERON:0006603!4.41e-23!193;UBERON:0003104!3.56e-15!131;UBERON:0009142!3.56e-15!131;UBERON:0001048!1.85e-14!147;UBERON:0005057!1.20e-13!51;UBERON:0000077!2.50e-12!97;UBERON:0001041!2.67e-12!92;UBERON:0002405!9.55e-12!70;UBERON:0003081!1.41e-10!88;UBERON:0004177!3.55e-10!29;UBERON:0000490!7.88e-10!66;UBERON:0005911!1.64e-09!69;UBERON:0002390!6.22e-09!45;UBERON:0003061!6.22e-09!45;UBERON:0003929!6.85e-09!55;UBERON:0000949!7.48e-09!72;UBERON:0000466!2.09e-08!79;UBERON:0002368!3.17e-08!60;UBERON:0006562!3.50e-08!24;UBERON:0001557!3.50e-08!24;UBERON:0001042!3.50e-08!24;UBERON:0008814!3.50e-08!24;UBERON:0009145!3.50e-08!24;UBERON:0002370!5.89e-08!23;UBERON:0000974!5.89e-08!23;UBERON:0004807!5.89e-08!23;UBERON:0005058!5.89e-08!23;UBERON:0003351!5.89e-08!23;UBERON:0009113!5.89e-08!23;UBERON:0003295!5.89e-08!23;UBERON:0009722!5.89e-08!23;UBERON:0005562!5.89e-08!23;UBERON:0007690!5.89e-08!23;UBERON:0004921!6.09e-08!126;UBERON:0004185!6.09e-08!126;UBERON:0002193!7.75e-08!48;UBERON:0002530!1.28e-07!65;UBERON:0003408!2.04e-07!24;UBERON:0001007!2.14e-07!128;UBERON:0001555!2.14e-07!128;UBERON:0007026!2.14e-07!128;UBERON:0004119!2.69e-07!130;UBERON:0000925!2.69e-07!130;UBERON:0006595!2.69e-07!130;UBERON:0000065!6.61e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.24e-16,120;UBERON:0004120,8.24e-16,120;UBERON:0006603,8.24e-16,120;UBERON:0001048,3.03e-13,134;UBERON:0001041,1.53e-11,80;UBERON:0003081,1.28e-10,87;UBERON:0004177,3.55e-10,29;UBERON:0005057,3.55e-10,29;UBERON:0000490,7.88e-10,66;UBERON:0005911,1.64e-09,69;UBERON:0000077,2.67e-09,35;UBERON:0002390,6.22e-09,45;UBERON:0003061,6.22e-09,45;UBERON:0003929,6.85e-09,55;UBERON:0000949,7.48e-09,72;UBERON:0002368,3.17e-08,60;UBERON:0006562,3.50e-08,24;UBERON:0001557,3.50e-08,24;UBERON:0001042,3.50e-08,24;UBERON:0008814,3.50e-08,24;UBERON:0009145,3.50e-08,24;UBERON:0002370,5.89e-08,23;UBERON:0000974,5.89e-08,23;UBERON:0004807,5.89e-08,23;UBERON:0005058,5.89e-08,23;UBERON:0003351,5.89e-08,23;UBERON:0009113,5.89e-08,23;UBERON:0003295,5.89e-08,23;UBERON:0009722,5.89e-08,23;UBERON:0005562,5.89e-08,23;UBERON:0007690,5.89e-08,23;UBERON:0002100,7.02e-08,90;UBERON:0002193,7.75e-08,48;UBERON:0002405,7.75e-08,48;UBERON:0002530,1.28e-07,65;UBERON:0003408,2.04e-07,24;UBERON:0004921,4.78e-07,114;UBERON:0000065,6.61e-07,41|phase1_expression=8.16759120234449,8.37540978334467,12.739978702907,7.56160528267075,12.5223932486587,13.5982210248631,9.57811826441655,19.8849918100027,42.2366166455,32.0668401061131,34.586029581552,32.2279522341159,22.5984963509192,19.5821701418554,19.3203661853084,25.1069331563384,35.6776557845355,22.0823515750766,22.0754238105239,17.8243653755173,11.2257142999412,13.7021512657222,9.66439219814061,9.27956052201759,8.48814339948529,11.4846392823004,7.75371593086335,7.75696437669201,7.03086651988583,10.0812051903972,9.75614246883341,7.62036808151557,4.30545351309199,0,15.0202842270663,15.9585259544153,13.4751775133164,38.0863783970586,38.2854318816662,24.6056159667685,54.1172968988533,51.2284113718834,46.1234835379596,25.0534667771399,23.1139403180493,19.8230492334616,4.69434806608824,3.2703773457067,3.29529274101708,6.22175677037707,5.87942970826523,1.43752564364972,19.1272170905819,18.1340535502836,14.452033363126,11.3194151855817,7.73640287834643,14.4388185837684,2.83243045203437,2.11596391708813,2.53532561402472,5.76035704517525,1.77858959222228,4.49949858640699,4.94433181283487,4.9733608046227,4.79360176829448,5.37905627450176,8.29516898467821,4.99521971827255,8.83364837675805,2.85650984403804,1.76694832761291,6.36952155917761,5.55903731905771,2.75765635983006,2.20231761998777,4.08599481872601,3.68655679814984,3.29715719325485,3.01909223887952,2.08365348222704,2.23346399201105,2.8138130501584,5.04234217663473,4.12480019663135,4.41352210477219,2.98239113320481,17.7199292399651,11.3357340160178,13.0439019915755,18.9293252935905,22.4390540123558,9.71465744948071,11.695975514058,11.2006721774334,15.4488862144927,15.8500199997594,16.8860902991865,16.606960001986,9.29566570526091,11.5493829672886,10.1922095882658,14.2213340630666,11.2575341325831,10.8944742154292,11.1215377903252,13.5878816865681,13.9826457169473,17.0708459924548,12.3174582003956,10.3518262626128,14.0675453326196,18.0867168663147,23.4001527200053,18.8499886994513,15.8204779349999,12.0017466243527,19.4614321428972,21.5149910430054,23.8508839937225,27.6378894287077,5.59175283654366,8.78342391034641,5.86450779077674,9.45191104271788,19.529865294465,14.9975682748352,19.0605340609597,4.49371918214468,5.03250663100489,7.03664371832041,5.9100268865374,6.39288643325826,5.194701113989,4.38051410282946,16.8034950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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11908 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P81269,uniprot:Q9CWS2 | |||
|association_with_transcript=-2bp_to_NM_007497,uc007xqs.1_5end | |||
|cluster_id=chr15:100058266..100058287,+ | |||
|description=CAGE_peak_1_at_Atf1_5end | |||
|id=chr15:100058266..100058287,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.41e-23!193;UBERON:0004120!4.41e-23!193;UBERON:0006603!4.41e-23!193;UBERON:0003104!3.56e-15!131;UBERON:0009142!3.56e-15!131;UBERON:0001048!1.85e-14!147;UBERON:0005057!1.20e-13!51;UBERON:0000077!2.50e-12!97;UBERON:0001041!2.67e-12!92;UBERON:0002405!9.55e-12!70;UBERON:0003081!1.41e-10!88;UBERON:0004177!3.55e-10!29;UBERON:0000490!7.88e-10!66;UBERON:0005911!1.64e-09!69;UBERON:0002390!6.22e-09!45;UBERON:0003061!6.22e-09!45;UBERON:0003929!6.85e-09!55;UBERON:0000949!7.48e-09!72;UBERON:0000466!2.09e-08!79;UBERON:0002368!3.17e-08!60;UBERON:0006562!3.50e-08!24;UBERON:0001557!3.50e-08!24;UBERON:0001042!3.50e-08!24;UBERON:0008814!3.50e-08!24;UBERON:0009145!3.50e-08!24;UBERON:0002370!5.89e-08!23;UBERON:0000974!5.89e-08!23;UBERON:0004807!5.89e-08!23;UBERON:0005058!5.89e-08!23;UBERON:0003351!5.89e-08!23;UBERON:0009113!5.89e-08!23;UBERON:0003295!5.89e-08!23;UBERON:0009722!5.89e-08!23;UBERON:0005562!5.89e-08!23;UBERON:0007690!5.89e-08!23;UBERON:0004921!6.09e-08!126;UBERON:0004185!6.09e-08!126;UBERON:0002193!7.75e-08!48;UBERON:0002530!1.28e-07!65;UBERON:0003408!2.04e-07!24;UBERON:0001007!2.14e-07!128;UBERON:0001555!2.14e-07!128;UBERON:0007026!2.14e-07!128;UBERON:0004119!2.69e-07!130;UBERON:0000925!2.69e-07!130;UBERON:0006595!2.69e-07!130;UBERON:0000065!6.61e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.24e-16,120;UBERON:0004120,8.24e-16,120;UBERON:0006603,8.24e-16,120;UBERON:0001048,3.03e-13,134;UBERON:0001041,1.53e-11,80;UBERON:0003081,1.28e-10,87;UBERON:0004177,3.55e-10,29;UBERON:0005057,3.55e-10,29;UBERON:0000490,7.88e-10,66;UBERON:0005911,1.64e-09,69;UBERON:0000077,2.67e-09,35;UBERON:0002390,6.22e-09,45;UBERON:0003061,6.22e-09,45;UBERON:0003929,6.85e-09,55;UBERON:0000949,7.48e-09,72;UBERON:0002368,3.17e-08,60;UBERON:0006562,3.50e-08,24;UBERON:0001557,3.50e-08,24;UBERON:0001042,3.50e-08,24;UBERON:0008814,3.50e-08,24;UBERON:0009145,3.50e-08,24;UBERON:0002370,5.89e-08,23;UBERON:0000974,5.89e-08,23;UBERON:0004807,5.89e-08,23;UBERON:0005058,5.89e-08,23;UBERON:0003351,5.89e-08,23;UBERON:0009113,5.89e-08,23;UBERON:0003295,5.89e-08,23;UBERON:0009722,5.89e-08,23;UBERON:0005562,5.89e-08,23;UBERON:0007690,5.89e-08,23;UBERON:0002100,7.02e-08,90;UBERON:0002193,7.75e-08,48;UBERON:0002405,7.75e-08,48;UBERON:0002530,1.28e-07,65;UBERON:0003408,2.04e-07,24;UBERON:0004921,4.78e-07,114;UBERON:0000065,6.61e-07,41 | |||
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| |||
|short_description=p1@Atf1 | |||
}} |
Revision as of 22:27, 4 August 2015
Short description: | p1@Atf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atf1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_007497, uc007xqs.1_5end |
EntrezGene: | 11908 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data