FFCP PHASE1:Mm9::chr5:73144027..73144036,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22165|HGNC=|MCL_coexpression_id=33|UniProt=P42682|association_with_transcript=-15bp_to_ENSMUST00000113604,NM_001122754,uc008xrx.2,uc008xry.2,uc008xrz.1,uc012dwz.1_5end|description=CAGE_peak_3_at_Txk_5end|id=chr5:73144027..73144036,-|ontology_enrichment_celltype=CL:0000838!2.91e-21!12;CL:0000084!5.32e-20!11;CL:0000827!5.32e-20!11;CL:0000542!2.15e-19!13;CL:0000051!2.15e-19!13;CL:0000791!5.59e-17!9;CL:0000789!5.59e-17!9;CL:0002420!5.59e-17!9;CL:0002419!5.59e-17!9;CL:0000790!5.59e-17!9;CL:0000624!3.25e-15!8;CL:0000738!3.99e-14!17;CL:0002087!3.99e-14!17;CL:0002031!9.00e-14!25;CL:0000893!1.10e-11!6;CL:0002489!1.10e-11!6;CL:0000898!1.10e-11!6;CL:0000809!1.10e-11!6;CL:0000810!1.10e-11!6;CL:0000895!1.10e-11!6;CL:0000808!1.10e-11!6;CL:0000894!1.10e-11!6;CL:0000806!1.10e-11!6;CL:0000807!1.10e-11!6;CL:0000805!1.10e-11!6;CL:0002425!1.10e-11!6;CL:0002436!1.10e-11!6;CL:0002427!1.10e-11!6;CL:0002428!1.10e-11!6;CL:0002429!1.10e-11!6;CL:0002433!1.10e-11!6;CL:0002431!1.10e-11!6;CL:0002432!1.10e-11!6;CL:0000988!6.10e-10!32;CL:0002032!6.10e-10!32;CL:0000037!6.10e-10!32;CL:0000566!6.10e-10!32;CL:0000837!6.10e-10!32|ontology_enrichment_celltype_v019_2=CL:0000791,2.70e-19,9;CL:0000789,2.70e-19,9;CL:0002420,2.70e-19,9;CL:0002419,2.70e-19,9;CL:0000790,2.70e-19,9;CL:0000084,1.01e-15,11;CL:0000827,1.01e-15,11;CL:0000624,2.05e-15,8;CL:0000838,2.21e-14,12;CL:0000893,2.04e-13,6;CL:0002489,2.04e-13,6;CL:0000898,2.04e-13,6;CL:0000809,2.04e-13,6;CL:0000810,2.04e-13,6;CL:0000895,2.04e-13,6;CL:0000808,2.04e-13,6;CL:0000894,2.04e-13,6;CL:0000806,2.04e-13,6;CL:0000807,2.04e-13,6;CL:0000805,2.04e-13,6;CL:0002425,2.04e-13,6;CL:0002436,2.04e-13,6;CL:0002427,2.04e-13,6;CL:0002428,2.04e-13,6;CL:0002429,2.04e-13,6;CL:0002433,2.04e-13,6;CL:0002431,2.04e-13,6;CL:0002432,2.04e-13,6;CL:0000542,3.02e-13,13;CL:0000051,3.02e-13,13;CL:0000738,4.94e-10,17;CL:0002087,4.94e-10,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.50e-32!29;UBERON:0002370!1.24e-31!23;UBERON:0000974!1.24e-31!23;UBERON:0004807!1.24e-31!23;UBERON:0005058!1.24e-31!23;UBERON:0003351!1.24e-31!23;UBERON:0009113!1.24e-31!23;UBERON:0003295!1.24e-31!23;UBERON:0009722!1.24e-31!23;UBERON:0005562!1.24e-31!23;UBERON:0007690!1.24e-31!23;UBERON:0006562!4.49e-30!24;UBERON:0003408!4.49e-30!24;UBERON:0001557!4.49e-30!24;UBERON:0001042!4.49e-30!24;UBERON:0008814!4.49e-30!24;UBERON:0009145!4.49e-30!24;UBERON:0000072!4.30e-26!27;UBERON:0002193!5.98e-24!48;UBERON:0002390!9.09e-24!45;UBERON:0003061!9.09e-24!45;UBERON:0000063!7.87e-19!35;UBERON:0000065!1.44e-18!41;UBERON:0001004!5.57e-18!42;UBERON:0005057!8.79e-17!51;UBERON:0002405!2.46e-15!70;UBERON:0000077!1.00e-11!97;UBERON:0003929!4.14e-11!55;UBERON:0003081!8.94e-11!88;UBERON:0001041!9.15e-11!92;UBERON:0002368!1.00e-09!60;UBERON:0005911!1.38e-09!69;UBERON:0002530!1.46e-08!65;UBERON:0000490!2.36e-08!66;UBERON:0000949!4.03e-08!72;UBERON:0004119!1.62e-07!130;UBERON:0000925!1.62e-07!130;UBERON:0006595!1.62e-07!130;UBERON:0004921!2.87e-07!126;UBERON:0004185!2.87e-07!126;UBERON:0000064!3.15e-07!99;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.01e-46,23;UBERON:0000974,2.01e-46,23;UBERON:0004807,2.01e-46,23;UBERON:0005058,2.01e-46,23;UBERON:0003351,2.01e-46,23;UBERON:0009113,2.01e-46,23;UBERON:0003295,2.01e-46,23;UBERON:0009722,2.01e-46,23;UBERON:0005562,2.01e-46,23;UBERON:0007690,2.01e-46,23;UBERON:0006562,2.08e-44,24;UBERON:0003408,2.08e-44,24;UBERON:0001557,2.08e-44,24;UBERON:0001042,2.08e-44,24;UBERON:0008814,2.08e-44,24;UBERON:0009145,2.08e-44,24;UBERON:0000072,2.93e-39,27;UBERON:0004177,2.04e-36,29;UBERON:0005057,2.04e-36,29;UBERON:0000077,7.83e-30,35;UBERON:0007811,6.00e-29,36;UBERON:0000065,3.60e-25,41;UBERON:0001004,1.60e-24,42;UBERON:0002193,2.65e-24,48;UBERON:0002405,2.65e-24,48;UBERON:0000153,6.66e-24,43;UBERON:0002390,9.50e-23,45;UBERON:0003061,9.50e-23,45;UBERON:0003929,3.13e-18,55;UBERON:0002368,1.56e-16,60;UBERON:0002530,4.29e-15,65;UBERON:0000490,7.83e-15,66;UBERON:0005911,4.30e-14,69;UBERON:0000949,2.05e-13,72;UBERON:0001041,7.51e-12,80;UBERON:0003081,1.02e-10,87;UBERON:0004921,1.24e-07,114;UBERON:0001007,1.85e-07,116;UBERON:0001555,1.85e-07,116;UBERON:0007026,1.85e-07,116;UBERON:0004119,2.71e-07,118;UBERON:0000925,2.71e-07,118;UBERON:0006595,2.71e-07,118;UBERON:0000926,3.92e-07,120;UBERON:0004120,3.92e-07,120;UBERON:0006603,3.92e-07,120|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.25261955442667,1.17032263160997,0.171217968225505,0.319088635981346,4.62241970814255,4.54586092578786,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.608175645870493,0.205421914329655,0.25984164595559,1.61124026100733,1.78813219303138,3.12508168751919,3.39685912501528,2.42319479875554,4.03896075271499,3.83139503519994,4.67797827550812,3.65604998233252,5.2594605981706,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p3@Txk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22165 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P42682 | |||
|association_with_transcript=-15bp_to_ENSMUST00000113604,NM_001122754,uc008xrx.2,uc008xry.2,uc008xrz.1,uc012dwz.1_5end | |||
|cluster_id=chr5:73144027..73144036,- | |||
|description=CAGE_peak_3_at_Txk_5end | |||
|id=chr5:73144027..73144036,- | |||
|ontology_enrichment_celltype=CL:0000838!2.91e-21!12;CL:0000084!5.32e-20!11;CL:0000827!5.32e-20!11;CL:0000542!2.15e-19!13;CL:0000051!2.15e-19!13;CL:0000791!5.59e-17!9;CL:0000789!5.59e-17!9;CL:0002420!5.59e-17!9;CL:0002419!5.59e-17!9;CL:0000790!5.59e-17!9;CL:0000624!3.25e-15!8;CL:0000738!3.99e-14!17;CL:0002087!3.99e-14!17;CL:0002031!9.00e-14!25;CL:0000893!1.10e-11!6;CL:0002489!1.10e-11!6;CL:0000898!1.10e-11!6;CL:0000809!1.10e-11!6;CL:0000810!1.10e-11!6;CL:0000895!1.10e-11!6;CL:0000808!1.10e-11!6;CL:0000894!1.10e-11!6;CL:0000806!1.10e-11!6;CL:0000807!1.10e-11!6;CL:0000805!1.10e-11!6;CL:0002425!1.10e-11!6;CL:0002436!1.10e-11!6;CL:0002427!1.10e-11!6;CL:0002428!1.10e-11!6;CL:0002429!1.10e-11!6;CL:0002433!1.10e-11!6;CL:0002431!1.10e-11!6;CL:0002432!1.10e-11!6;CL:0000988!6.10e-10!32;CL:0002032!6.10e-10!32;CL:0000037!6.10e-10!32;CL:0000566!6.10e-10!32;CL:0000837!6.10e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.70e-19,9;CL:0000789,2.70e-19,9;CL:0002420,2.70e-19,9;CL:0002419,2.70e-19,9;CL:0000790,2.70e-19,9;CL:0000084,1.01e-15,11;CL:0000827,1.01e-15,11;CL:0000624,2.05e-15,8;CL:0000838,2.21e-14,12;CL:0000893,2.04e-13,6;CL:0002489,2.04e-13,6;CL:0000898,2.04e-13,6;CL:0000809,2.04e-13,6;CL:0000810,2.04e-13,6;CL:0000895,2.04e-13,6;CL:0000808,2.04e-13,6;CL:0000894,2.04e-13,6;CL:0000806,2.04e-13,6;CL:0000807,2.04e-13,6;CL:0000805,2.04e-13,6;CL:0002425,2.04e-13,6;CL:0002436,2.04e-13,6;CL:0002427,2.04e-13,6;CL:0002428,2.04e-13,6;CL:0002429,2.04e-13,6;CL:0002433,2.04e-13,6;CL:0002431,2.04e-13,6;CL:0002432,2.04e-13,6;CL:0000542,3.02e-13,13;CL:0000051,3.02e-13,13;CL:0000738,4.94e-10,17;CL:0002087,4.94e-10,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.50e-32!29;UBERON:0002370!1.24e-31!23;UBERON:0000974!1.24e-31!23;UBERON:0004807!1.24e-31!23;UBERON:0005058!1.24e-31!23;UBERON:0003351!1.24e-31!23;UBERON:0009113!1.24e-31!23;UBERON:0003295!1.24e-31!23;UBERON:0009722!1.24e-31!23;UBERON:0005562!1.24e-31!23;UBERON:0007690!1.24e-31!23;UBERON:0006562!4.49e-30!24;UBERON:0003408!4.49e-30!24;UBERON:0001557!4.49e-30!24;UBERON:0001042!4.49e-30!24;UBERON:0008814!4.49e-30!24;UBERON:0009145!4.49e-30!24;UBERON:0000072!4.30e-26!27;UBERON:0002193!5.98e-24!48;UBERON:0002390!9.09e-24!45;UBERON:0003061!9.09e-24!45;UBERON:0000063!7.87e-19!35;UBERON:0000065!1.44e-18!41;UBERON:0001004!5.57e-18!42;UBERON:0005057!8.79e-17!51;UBERON:0002405!2.46e-15!70;UBERON:0000077!1.00e-11!97;UBERON:0003929!4.14e-11!55;UBERON:0003081!8.94e-11!88;UBERON:0001041!9.15e-11!92;UBERON:0002368!1.00e-09!60;UBERON:0005911!1.38e-09!69;UBERON:0002530!1.46e-08!65;UBERON:0000490!2.36e-08!66;UBERON:0000949!4.03e-08!72;UBERON:0004119!1.62e-07!130;UBERON:0000925!1.62e-07!130;UBERON:0006595!1.62e-07!130;UBERON:0004921!2.87e-07!126;UBERON:0004185!2.87e-07!126;UBERON:0000064!3.15e-07!99;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.01e-46,23;UBERON:0000974,2.01e-46,23;UBERON:0004807,2.01e-46,23;UBERON:0005058,2.01e-46,23;UBERON:0003351,2.01e-46,23;UBERON:0009113,2.01e-46,23;UBERON:0003295,2.01e-46,23;UBERON:0009722,2.01e-46,23;UBERON:0005562,2.01e-46,23;UBERON:0007690,2.01e-46,23;UBERON:0006562,2.08e-44,24;UBERON:0003408,2.08e-44,24;UBERON:0001557,2.08e-44,24;UBERON:0001042,2.08e-44,24;UBERON:0008814,2.08e-44,24;UBERON:0009145,2.08e-44,24;UBERON:0000072,2.93e-39,27;UBERON:0004177,2.04e-36,29;UBERON:0005057,2.04e-36,29;UBERON:0000077,7.83e-30,35;UBERON:0007811,6.00e-29,36;UBERON:0000065,3.60e-25,41;UBERON:0001004,1.60e-24,42;UBERON:0002193,2.65e-24,48;UBERON:0002405,2.65e-24,48;UBERON:0000153,6.66e-24,43;UBERON:0002390,9.50e-23,45;UBERON:0003061,9.50e-23,45;UBERON:0003929,3.13e-18,55;UBERON:0002368,1.56e-16,60;UBERON:0002530,4.29e-15,65;UBERON:0000490,7.83e-15,66;UBERON:0005911,4.30e-14,69;UBERON:0000949,2.05e-13,72;UBERON:0001041,7.51e-12,80;UBERON:0003081,1.02e-10,87;UBERON:0004921,1.24e-07,114;UBERON:0001007,1.85e-07,116;UBERON:0001555,1.85e-07,116;UBERON:0007026,1.85e-07,116;UBERON:0004119,2.71e-07,118;UBERON:0000925,2.71e-07,118;UBERON:0006595,2.71e-07,118;UBERON:0000926,3.92e-07,120;UBERON:0004120,3.92e-07,120;UBERON:0006603,3.92e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.25261955442667,1.17032263160997,0.171217968225505,0.319088635981346,4.62241970814255,4.54586092578786,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.608175645870493,0.205421914329655,0.25984164595559,1.61124026100733,1.78813219303138,3.12508168751919,3.39685912501528,2.42319479875554,4.03896075271499,3.83139503519994,4.67797827550812,3.65604998233252,5.2594605981706,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Txk | |||
}} |
Revision as of 14:11, 4 August 2015
Short description: | p3@Txk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Txk_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -15bp_to_ENSMUST00000113604, NM_001122754, uc008xrx.2, uc008xry.2, uc008xrz.1, uc012dwz.1_5end |
EntrezGene: | 22165 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data