FFCP PHASE1:Mm9::chr5:66254507..66254533,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=74734|HGNC=|MCL_coexpression_id=33|UniProt=Q9D3G9,Q504M6|association_with_transcript=-274bp_to_ENSMUST00000031106,NM_001081105,uc008xoe.1_5end|description=CAGE_peak_4_at_Rhoh_5end|id=chr5:66254507..66254533,+|ontology_enrichment_celltype=CL:0000838!3.19e-11!12;CL:0002031!4.49e-11!25;CL:0000542!3.36e-10!13;CL:0000051!3.36e-10!13;CL:0000084!8.41e-10!11;CL:0000827!8.41e-10!11;CL:0000988!5.12e-09!32;CL:0002032!5.12e-09!32;CL:0000037!5.12e-09!32;CL:0000566!5.12e-09!32;CL:0000837!5.12e-09!32;CL:0000738!5.33e-09!17;CL:0002087!5.33e-09!17;CL:0000791!3.88e-07!9;CL:0000789!3.88e-07!9;CL:0002420!3.88e-07!9;CL:0002419!3.88e-07!9;CL:0000790!3.88e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,8.95e-13,12;CL:0000791,2.88e-12,9;CL:0000789,2.88e-12,9;CL:0002420,2.88e-12,9;CL:0002419,2.88e-12,9;CL:0000790,2.88e-12,9;CL:0000542,9.29e-12,13;CL:0000051,9.29e-12,13;CL:0000084,5.22e-10,11;CL:0000827,5.22e-10,11;CL:0000624,4.26e-09,8;CL:0000738,6.95e-09,17;CL:0002087,6.95e-09,17;CL:0002031,7.83e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.71e-23!29;UBERON:0002193!3.91e-23!48;UBERON:0002390!2.93e-21!45;UBERON:0003061!2.93e-21!45;UBERON:0002370!1.58e-20!23;UBERON:0000974!1.58e-20!23;UBERON:0004807!1.58e-20!23;UBERON:0005058!1.58e-20!23;UBERON:0003351!1.58e-20!23;UBERON:0009113!1.58e-20!23;UBERON:0003295!1.58e-20!23;UBERON:0009722!1.58e-20!23;UBERON:0005562!1.58e-20!23;UBERON:0007690!1.58e-20!23;UBERON:0006562!1.83e-19!24;UBERON:0003408!1.83e-19!24;UBERON:0001557!1.83e-19!24;UBERON:0001042!1.83e-19!24;UBERON:0008814!1.83e-19!24;UBERON:0009145!1.83e-19!24;UBERON:0000072!9.50e-17!27;UBERON:0002405!2.09e-13!70;UBERON:0000063!8.15e-12!35;UBERON:0003081!5.79e-11!88;UBERON:0005057!8.54e-11!51;UBERON:0000065!1.10e-10!41;UBERON:0001004!2.60e-10!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.06e-36,23;UBERON:0000974,2.06e-36,23;UBERON:0004807,2.06e-36,23;UBERON:0005058,2.06e-36,23;UBERON:0003351,2.06e-36,23;UBERON:0009113,2.06e-36,23;UBERON:0003295,2.06e-36,23;UBERON:0009722,2.06e-36,23;UBERON:0005562,2.06e-36,23;UBERON:0007690,2.06e-36,23;UBERON:0006562,8.32e-35,24;UBERON:0003408,8.32e-35,24;UBERON:0001557,8.32e-35,24;UBERON:0001042,8.32e-35,24;UBERON:0008814,8.32e-35,24;UBERON:0009145,8.32e-35,24;UBERON:0000072,1.06e-30,27;UBERON:0004177,1.96e-28,29;UBERON:0005057,1.96e-28,29;UBERON:0000077,3.49e-23,35;UBERON:0007811,1.77e-22,36;UBERON:0002193,1.64e-21,48;UBERON:0002405,1.64e-21,48;UBERON:0002390,3.39e-20,45;UBERON:0003061,3.39e-20,45;UBERON:0000065,1.83e-19,41;UBERON:0001004,6.01e-19,42;UBERON:0000153,1.87e-18,43;UBERON:0003929,6.25e-14,55;UBERON:0002368,1.41e-12,60;UBERON:0002530,1.97e-11,65;UBERON:0000490,3.19e-11,66;UBERON:0005911,1.24e-10,69;UBERON:0000949,4.30e-10,72;UBERON:0003081,2.92e-09,87;UBERON:0001041,7.56e-09,80|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0.281577444303333,0,0,0,2.05440875917447,1.31130603628496,0,0.202475267389826,0,0.473193248037357,0.822686601634433,1.27316895539409,0,0.794327609607082,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.89606672376907,0.202725215290164,0.308132871494482,1.16928740680016,1.61124026100733,1.58945083825012,2.88469078847925,2.36303243479324,3.93769154797776,3.42930629947499,3.62974266492626,1.65678397257579,3.17499077413087,3.97381467417334,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p4@Rhoh}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74734 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D3G9,uniprot:Q504M6 | |||
|association_with_transcript=-274bp_to_ENSMUST00000031106,NM_001081105,uc008xoe.1_5end | |||
|cluster_id=chr5:66254507..66254533,+ | |||
|description=CAGE_peak_4_at_Rhoh_5end | |||
|id=chr5:66254507..66254533,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.19e-11!12;CL:0002031!4.49e-11!25;CL:0000542!3.36e-10!13;CL:0000051!3.36e-10!13;CL:0000084!8.41e-10!11;CL:0000827!8.41e-10!11;CL:0000988!5.12e-09!32;CL:0002032!5.12e-09!32;CL:0000037!5.12e-09!32;CL:0000566!5.12e-09!32;CL:0000837!5.12e-09!32;CL:0000738!5.33e-09!17;CL:0002087!5.33e-09!17;CL:0000791!3.88e-07!9;CL:0000789!3.88e-07!9;CL:0002420!3.88e-07!9;CL:0002419!3.88e-07!9;CL:0000790!3.88e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.95e-13,12;CL:0000791,2.88e-12,9;CL:0000789,2.88e-12,9;CL:0002420,2.88e-12,9;CL:0002419,2.88e-12,9;CL:0000790,2.88e-12,9;CL:0000542,9.29e-12,13;CL:0000051,9.29e-12,13;CL:0000084,5.22e-10,11;CL:0000827,5.22e-10,11;CL:0000624,4.26e-09,8;CL:0000738,6.95e-09,17;CL:0002087,6.95e-09,17;CL:0002031,7.83e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.71e-23!29;UBERON:0002193!3.91e-23!48;UBERON:0002390!2.93e-21!45;UBERON:0003061!2.93e-21!45;UBERON:0002370!1.58e-20!23;UBERON:0000974!1.58e-20!23;UBERON:0004807!1.58e-20!23;UBERON:0005058!1.58e-20!23;UBERON:0003351!1.58e-20!23;UBERON:0009113!1.58e-20!23;UBERON:0003295!1.58e-20!23;UBERON:0009722!1.58e-20!23;UBERON:0005562!1.58e-20!23;UBERON:0007690!1.58e-20!23;UBERON:0006562!1.83e-19!24;UBERON:0003408!1.83e-19!24;UBERON:0001557!1.83e-19!24;UBERON:0001042!1.83e-19!24;UBERON:0008814!1.83e-19!24;UBERON:0009145!1.83e-19!24;UBERON:0000072!9.50e-17!27;UBERON:0002405!2.09e-13!70;UBERON:0000063!8.15e-12!35;UBERON:0003081!5.79e-11!88;UBERON:0005057!8.54e-11!51;UBERON:0000065!1.10e-10!41;UBERON:0001004!2.60e-10!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.06e-36,23;UBERON:0000974,2.06e-36,23;UBERON:0004807,2.06e-36,23;UBERON:0005058,2.06e-36,23;UBERON:0003351,2.06e-36,23;UBERON:0009113,2.06e-36,23;UBERON:0003295,2.06e-36,23;UBERON:0009722,2.06e-36,23;UBERON:0005562,2.06e-36,23;UBERON:0007690,2.06e-36,23;UBERON:0006562,8.32e-35,24;UBERON:0003408,8.32e-35,24;UBERON:0001557,8.32e-35,24;UBERON:0001042,8.32e-35,24;UBERON:0008814,8.32e-35,24;UBERON:0009145,8.32e-35,24;UBERON:0000072,1.06e-30,27;UBERON:0004177,1.96e-28,29;UBERON:0005057,1.96e-28,29;UBERON:0000077,3.49e-23,35;UBERON:0007811,1.77e-22,36;UBERON:0002193,1.64e-21,48;UBERON:0002405,1.64e-21,48;UBERON:0002390,3.39e-20,45;UBERON:0003061,3.39e-20,45;UBERON:0000065,1.83e-19,41;UBERON:0001004,6.01e-19,42;UBERON:0000153,1.87e-18,43;UBERON:0003929,6.25e-14,55;UBERON:0002368,1.41e-12,60;UBERON:0002530,1.97e-11,65;UBERON:0000490,3.19e-11,66;UBERON:0005911,1.24e-10,69;UBERON:0000949,4.30e-10,72;UBERON:0003081,2.92e-09,87;UBERON:0001041,7.56e-09,80 | |||
|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0.281577444303333,0,0,0,2.05440875917447,1.31130603628496,0,0.202475267389826,0,0.473193248037357,0.822686601634433,1.27316895539409,0,0.794327609607082,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.89606672376907,0.202725215290164,0.308132871494482,1.16928740680016,1.61124026100733,1.58945083825012,2.88469078847925,2.36303243479324,3.93769154797776,3.42930629947499,3.62974266492626,1.65678397257579,3.17499077413087,3.97381467417334,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p4@Rhoh | |||
}} |
Revision as of 13:04, 4 August 2015
Short description: | p4@Rhoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rhoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -274bp_to_ENSMUST00000031106, NM_001081105, uc008xoe.1_5end |
EntrezGene: | 74734 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.95e-13 | 12 |
mature alpha-beta T cell | 2.88e-12 | 9 |
alpha-beta T cell | 2.88e-12 | 9 |
immature T cell | 2.88e-12 | 9 |
mature T cell | 2.88e-12 | 9 |
immature alpha-beta T cell | 2.88e-12 | 9 |
lymphocyte | 9.29e-12 | 13 |
common lymphoid progenitor | 9.29e-12 | 13 |
T cell | 5.22e-10 | 11 |
pro-T cell | 5.22e-10 | 11 |
CD4-positive, alpha-beta T cell | 4.26e-09 | 8 |
leukocyte | 6.95e-09 | 17 |
nongranular leukocyte | 6.95e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 7.83e-08 | 25 |