FFCP PHASE1:Mm9::chr3:87650926..87650989,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=27371|HGNC=|MCL_coexpression_id=7|UniProt=Q9QXK9,Q5D0E4|association_with_transcript=249bp_to_ENSMUST00000029709,ENSMUST00000107581,NM_001025571,NM_021309,uc008psz.1,uc008pta.1_5end|description=CAGE_peak_1_at_Sh2d2a_5end|id=chr3:87650926..87650989,+|ontology_enrichment_celltype=CL:0000838!3.82e-10!12;CL:0000084!1.64e-09!11;CL:0000827!1.64e-09!11;CL:0000542!7.63e-09!13;CL:0000051!7.63e-09!13;CL:0000791!2.07e-08!9;CL:0000789!2.07e-08!9;CL:0002420!2.07e-08!9;CL:0002419!2.07e-08!9;CL:0000790!2.07e-08!9;CL:0000624!1.21e-07!8;CL:0002031!5.72e-07!25|ontology_enrichment_celltype_v019_2=CL:0000838,2.69e-15,12;CL:0000084,2.77e-14,11;CL:0000827,2.77e-14,11;CL:0000542,8.58e-14,13;CL:0000051,8.58e-14,13;CL:0002031,6.22e-13,25;CL:0000791,1.59e-12,9;CL:0000789,1.59e-12,9;CL:0002420,1.59e-12,9;CL:0002419,1.59e-12,9;CL:0000790,1.59e-12,9;CL:0000624,2.66e-11,8;CL:0000738,1.38e-09,17;CL:0002087,1.38e-09,17;CL:0000893,7.05e-09,6;CL:0002489,7.05e-09,6;CL:0000898,7.05e-09,6;CL:0000809,7.05e-09,6;CL:0000810,7.05e-09,6;CL:0000895,7.05e-09,6;CL:0000808,7.05e-09,6;CL:0000894,7.05e-09,6;CL:0000806,7.05e-09,6;CL:0000807,7.05e-09,6;CL:0000805,7.05e-09,6;CL:0002425,7.05e-09,6;CL:0002436,7.05e-09,6;CL:0002427,7.05e-09,6;CL:0002428,7.05e-09,6;CL:0002429,7.05e-09,6;CL:0002433,7.05e-09,6;CL:0002431,7.05e-09,6;CL:0002432,7.05e-09,6;CL:0000988,8.39e-09,32;CL:0002032,8.39e-09,32;CL:0000037,8.39e-09,32;CL:0000837,8.39e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.69e-15!29;UBERON:0003408!1.51e-12!24;UBERON:0002193!1.65e-12!48;UBERON:0004119!3.36e-12!130;UBERON:0000925!3.36e-12!130;UBERON:0006595!3.36e-12!130;UBERON:0001007!4.46e-12!128;UBERON:0001555!4.46e-12!128;UBERON:0007026!4.46e-12!128;UBERON:0002370!4.78e-12!23;UBERON:0000974!4.78e-12!23;UBERON:0004807!4.78e-12!23;UBERON:0005058!4.78e-12!23;UBERON:0003351!4.78e-12!23;UBERON:0009113!4.78e-12!23;UBERON:0003295!4.78e-12!23;UBERON:0009722!4.78e-12!23;UBERON:0005562!4.78e-12!23;UBERON:0007690!4.78e-12!23;UBERON:0006562!7.16e-12!24;UBERON:0001557!7.16e-12!24;UBERON:0001042!7.16e-12!24;UBERON:0008814!7.16e-12!24;UBERON:0009145!7.16e-12!24;UBERON:0004921!2.73e-11!126;UBERON:0004185!2.73e-11!126;UBERON:0002390!4.94e-11!45;UBERON:0003061!4.94e-11!45;UBERON:0005057!1.07e-10!51;UBERON:0002405!1.41e-10!70;UBERON:0001004!9.32e-10!42;UBERON:0000077!1.58e-09!97;UBERON:0000072!2.57e-09!27;UBERON:0000065!2.62e-09!41;UBERON:0001041!6.94e-09!92;UBERON:0002530!1.63e-08!65;UBERON:0003081!1.10e-07!88;UBERON:0003104!6.69e-07!131;UBERON:0009142!6.69e-07!131;UBERON:0002368!6.71e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.11e-23,29;UBERON:0005057,4.11e-23,29;UBERON:0002193,2.64e-22,48;UBERON:0002405,2.64e-22,48;UBERON:0003408,9.56e-21,24;UBERON:0002370,6.16e-20,23;UBERON:0000974,6.16e-20,23;UBERON:0004807,6.16e-20,23;UBERON:0005058,6.16e-20,23;UBERON:0003351,6.16e-20,23;UBERON:0009113,6.16e-20,23;UBERON:0003295,6.16e-20,23;UBERON:0009722,6.16e-20,23;UBERON:0005562,6.16e-20,23;UBERON:0007690,6.16e-20,23;UBERON:0002390,8.13e-20,45;UBERON:0003061,8.13e-20,45;UBERON:0000077,2.86e-19,35;UBERON:0006562,8.61e-19,24;UBERON:0001557,8.61e-19,24;UBERON:0001042,8.61e-19,24;UBERON:0008814,8.61e-19,24;UBERON:0009145,8.61e-19,24;UBERON:0001004,2.15e-16,42;UBERON:0000072,7.05e-16,27;UBERON:0000065,1.20e-15,41;UBERON:0004119,1.57e-12,118;UBERON:0000925,1.57e-12,118;UBERON:0006595,1.57e-12,118;UBERON:0001007,3.78e-12,116;UBERON:0001555,3.78e-12,116;UBERON:0007026,3.78e-12,116;UBERON:0007811,2.61e-11,36;UBERON:0004921,4.04e-11,114;UBERON:0001041,5.27e-11,80;UBERON:0003081,3.43e-09,87;UBERON:0002530,1.15e-08,65;UBERON:0000153,2.40e-08,43;UBERON:0005911,2.55e-08,69;UBERON:0002368,5.09e-07,60;UBERON:0003929,7.25e-07,55|phase1_expression=0,0,0,0,0,0,0,187.61618896061,702.394934814665,604.822736016031,277.886762429995,266.917643998396,142.610208032694,132.616750469619,3.66420737997229,4.45445588257617,2.09868563438444,20.3473096656063,19.1960207048034,20.3707032863054,2.63634199468316,7.4468213400664,10.4479915655574,3.19984845586813,2.75291137280604,0,0,0,1.90023419456374,1.00812051903972,3.32595765982957,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,39.2611298175103,277.813700390345,269.883320711399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08921443999194,0,0.579728977403356,0,0,0,0,0,4.21333260395256,0,0,0,0,0,0,0,0,0,0,4.33898742932428,59.2967753552023,3.41416919849097,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,1.3013942122792,5.30766331169925,0.808834249737046,0.883366073841574,2.42437626567611,1.86391761218122,0,0,4.85368404896324,0.479260498023681,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,1.36847667671102,0.505445516867349,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0.934122738937356,0.16455984991348,0.492502392237286,0.0810688095458557,0.877199924551994,0.439100230582101,0.402619256281115,0,0,9.91256348951394,1.32225283331772,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,2.37264530772256,0.494096864172033,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,1.08069024937347,1.39398891278057,0.189667900953082,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,1.13494658742525,0.549122826376163,1.43768206527355,4.09355042435354,1.24815069245824,0.252578877947112,0.179397413521912,0,5.91210208533135,0,0,0,0,1.50755631697634,0,0.585400943573396,1.7339865851681,0.44292937929755,1.91345722388985,3.27726629431476,2.93564469172023,3.18227928879325,0,0,2.45882136509518,2.75936746304733,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,1.81467135269789,1.32745138339963,0,0,0,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.329098041204242,1.8267896946876,9.85621173867584,0,0.661585194164886,0.16488625294148,0,0.241251699712623,0,0.656563598980245,1.7488850197791,0.18542530201051,12.1318325366475,0.412773735926445,1.85194527369712,4.33247451110789,7.65487675237741,8.00723606222829,1.35982743995084,1.11961161858926,1.38199973804424,0,0,0,0.216010681643603,0,0,0.404593039154462,0.661227645802687,0.785267825952089,1.55537967950151,3.72803587852155,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,89.4311471377744,8.71718425747706,18.7961051611634,41.5746633528944,41.7132200905232,62.981989465661,59.8573338609445,67.7894929731309,61.2866351185256,60.5844112907249,67.65437022682,78.74596763772,73.9869062214133,95.0209214736156,0.226730383615211,0,0,0,0.386379188064381,16.1406928888016,2.01466786693992,0.857473516316263,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,1.01391719956096,0.565879024158229,0.187283014939765,0.0640251524048693,0.459483751644906,0.476293691283074,0.115884325944855,0,0,0.294397840268795,1.37147700954166,0.354951612318675,0,0.436039249896986,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0.935726433781634,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264|short_description=p1@Sh2d2a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27371 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QXK9,uniprot:Q5D0E4 | |||
|association_with_transcript=249bp_to_ENSMUST00000029709,ENSMUST00000107581,NM_001025571,NM_021309,uc008psz.1,uc008pta.1_5end | |||
|cluster_id=chr3:87650926..87650989,+ | |||
|description=CAGE_peak_1_at_Sh2d2a_5end | |||
|id=chr3:87650926..87650989,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.82e-10!12;CL:0000084!1.64e-09!11;CL:0000827!1.64e-09!11;CL:0000542!7.63e-09!13;CL:0000051!7.63e-09!13;CL:0000791!2.07e-08!9;CL:0000789!2.07e-08!9;CL:0002420!2.07e-08!9;CL:0002419!2.07e-08!9;CL:0000790!2.07e-08!9;CL:0000624!1.21e-07!8;CL:0002031!5.72e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.69e-15,12;CL:0000084,2.77e-14,11;CL:0000827,2.77e-14,11;CL:0000542,8.58e-14,13;CL:0000051,8.58e-14,13;CL:0002031,6.22e-13,25;CL:0000791,1.59e-12,9;CL:0000789,1.59e-12,9;CL:0002420,1.59e-12,9;CL:0002419,1.59e-12,9;CL:0000790,1.59e-12,9;CL:0000624,2.66e-11,8;CL:0000738,1.38e-09,17;CL:0002087,1.38e-09,17;CL:0000893,7.05e-09,6;CL:0002489,7.05e-09,6;CL:0000898,7.05e-09,6;CL:0000809,7.05e-09,6;CL:0000810,7.05e-09,6;CL:0000895,7.05e-09,6;CL:0000808,7.05e-09,6;CL:0000894,7.05e-09,6;CL:0000806,7.05e-09,6;CL:0000807,7.05e-09,6;CL:0000805,7.05e-09,6;CL:0002425,7.05e-09,6;CL:0002436,7.05e-09,6;CL:0002427,7.05e-09,6;CL:0002428,7.05e-09,6;CL:0002429,7.05e-09,6;CL:0002433,7.05e-09,6;CL:0002431,7.05e-09,6;CL:0002432,7.05e-09,6;CL:0000988,8.39e-09,32;CL:0002032,8.39e-09,32;CL:0000037,8.39e-09,32;CL:0000837,8.39e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.69e-15!29;UBERON:0003408!1.51e-12!24;UBERON:0002193!1.65e-12!48;UBERON:0004119!3.36e-12!130;UBERON:0000925!3.36e-12!130;UBERON:0006595!3.36e-12!130;UBERON:0001007!4.46e-12!128;UBERON:0001555!4.46e-12!128;UBERON:0007026!4.46e-12!128;UBERON:0002370!4.78e-12!23;UBERON:0000974!4.78e-12!23;UBERON:0004807!4.78e-12!23;UBERON:0005058!4.78e-12!23;UBERON:0003351!4.78e-12!23;UBERON:0009113!4.78e-12!23;UBERON:0003295!4.78e-12!23;UBERON:0009722!4.78e-12!23;UBERON:0005562!4.78e-12!23;UBERON:0007690!4.78e-12!23;UBERON:0006562!7.16e-12!24;UBERON:0001557!7.16e-12!24;UBERON:0001042!7.16e-12!24;UBERON:0008814!7.16e-12!24;UBERON:0009145!7.16e-12!24;UBERON:0004921!2.73e-11!126;UBERON:0004185!2.73e-11!126;UBERON:0002390!4.94e-11!45;UBERON:0003061!4.94e-11!45;UBERON:0005057!1.07e-10!51;UBERON:0002405!1.41e-10!70;UBERON:0001004!9.32e-10!42;UBERON:0000077!1.58e-09!97;UBERON:0000072!2.57e-09!27;UBERON:0000065!2.62e-09!41;UBERON:0001041!6.94e-09!92;UBERON:0002530!1.63e-08!65;UBERON:0003081!1.10e-07!88;UBERON:0003104!6.69e-07!131;UBERON:0009142!6.69e-07!131;UBERON:0002368!6.71e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.11e-23,29;UBERON:0005057,4.11e-23,29;UBERON:0002193,2.64e-22,48;UBERON:0002405,2.64e-22,48;UBERON:0003408,9.56e-21,24;UBERON:0002370,6.16e-20,23;UBERON:0000974,6.16e-20,23;UBERON:0004807,6.16e-20,23;UBERON:0005058,6.16e-20,23;UBERON:0003351,6.16e-20,23;UBERON:0009113,6.16e-20,23;UBERON:0003295,6.16e-20,23;UBERON:0009722,6.16e-20,23;UBERON:0005562,6.16e-20,23;UBERON:0007690,6.16e-20,23;UBERON:0002390,8.13e-20,45;UBERON:0003061,8.13e-20,45;UBERON:0000077,2.86e-19,35;UBERON:0006562,8.61e-19,24;UBERON:0001557,8.61e-19,24;UBERON:0001042,8.61e-19,24;UBERON:0008814,8.61e-19,24;UBERON:0009145,8.61e-19,24;UBERON:0001004,2.15e-16,42;UBERON:0000072,7.05e-16,27;UBERON:0000065,1.20e-15,41;UBERON:0004119,1.57e-12,118;UBERON:0000925,1.57e-12,118;UBERON:0006595,1.57e-12,118;UBERON:0001007,3.78e-12,116;UBERON:0001555,3.78e-12,116;UBERON:0007026,3.78e-12,116;UBERON:0007811,2.61e-11,36;UBERON:0004921,4.04e-11,114;UBERON:0001041,5.27e-11,80;UBERON:0003081,3.43e-09,87;UBERON:0002530,1.15e-08,65;UBERON:0000153,2.40e-08,43;UBERON:0005911,2.55e-08,69;UBERON:0002368,5.09e-07,60;UBERON:0003929,7.25e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,187.61618896061,702.394934814665,604.822736016031,277.886762429995,266.917643998396,142.610208032694,132.616750469619,3.66420737997229,4.45445588257617,2.09868563438444,20.3473096656063,19.1960207048034,20.3707032863054,2.63634199468316,7.4468213400664,10.4479915655574,3.19984845586813,2.75291137280604,0,0,0,1.90023419456374,1.00812051903972,3.32595765982957,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,39.2611298175103,277.813700390345,269.883320711399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08921443999194,0,0.579728977403356,0,0,0,0,0,4.21333260395256,0,0,0,0,0,0,0,0,0,0,4.33898742932428,59.2967753552023,3.41416919849097,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,1.3013942122792,5.30766331169925,0.808834249737046,0.883366073841574,2.42437626567611,1.86391761218122,0,0,4.85368404896324,0.479260498023681,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,1.36847667671102,0.505445516867349,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0.934122738937356,0.16455984991348,0.492502392237286,0.0810688095458557,0.877199924551994,0.439100230582101,0.402619256281115,0,0,9.91256348951394,1.32225283331772,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,2.37264530772256,0.494096864172033,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,1.08069024937347,1.39398891278057,0.189667900953082,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,1.13494658742525,0.549122826376163,1.43768206527355,4.09355042435354,1.24815069245824,0.252578877947112,0.179397413521912,0,5.91210208533135,0,0,0,0,1.50755631697634,0,0.585400943573396,1.7339865851681,0.44292937929755,1.91345722388985,3.27726629431476,2.93564469172023,3.18227928879325,0,0,2.45882136509518,2.75936746304733,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,1.81467135269789,1.32745138339963,0,0,0,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.329098041204242,1.8267896946876,9.85621173867584,0,0.661585194164886,0.16488625294148,0,0.241251699712623,0,0.656563598980245,1.7488850197791,0.18542530201051,12.1318325366475,0.412773735926445,1.85194527369712,4.33247451110789,7.65487675237741,8.00723606222829,1.35982743995084,1.11961161858926,1.38199973804424,0,0,0,0.216010681643603,0,0,0.404593039154462,0.661227645802687,0.785267825952089,1.55537967950151,3.72803587852155,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,89.4311471377744,8.71718425747706,18.7961051611634,41.5746633528944,41.7132200905232,62.981989465661,59.8573338609445,67.7894929731309,61.2866351185256,60.5844112907249,67.65437022682,78.74596763772,73.9869062214133,95.0209214736156,0.226730383615211,0,0,0,0.386379188064381,16.1406928888016,2.01466786693992,0.857473516316263,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,1.01391719956096,0.565879024158229,0.187283014939765,0.0640251524048693,0.459483751644906,0.476293691283074,0.115884325944855,0,0,0.294397840268795,1.37147700954166,0.354951612318675,0,0.436039249896986,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0.935726433781634,0.644613162144895,0.191288332068843,0.661774257358546,0.695603506861264 | |||
|short_description=p1@Sh2d2a | |||
}} |
Revision as of 03:17, 4 August 2015
Short description: | p1@Sh2d2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh2d2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 249bp_to_ENSMUST00000029709, ENSMUST00000107581, NM_001025571, NM_021309, uc008psz.1, uc008pta.1_5end |
EntrezGene: | 27371 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data