FFCP PHASE1:Hg19::chr7:29603266..29603282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000447171,uc003tab.2_5end | |association_with_transcript=0bp_to_ENST00000447171,uc003tab.2_5end | ||
|cluster_id=chr7:29603266..29603282,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_1_at_ENST00000447171_5end,CAGE_peak_1_at_uc003tab.2_5end | |description=CAGE_peak_1_at_ENST00000447171_5end,CAGE_peak_1_at_uc003tab.2_5end | ||
|id=chr7:29603266..29603282,- | |id=chr7:29603266..29603282,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.97e-23;19!CL:0002577;8.90e-16;3!CL:0002541;2.16e-14;3!CL:0002536;6.23e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.00e-23,19;CL:0002577,8.94e-16,3;CL:0002541,2.66e-14,3;CL:0002536,5.82e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.11e-14!14;UBERON:0000158!5.11e-14!14;UBERON:0003124!8.03e-11!7;UBERON:0004923!3.31e-08!57;UBERON:0000478!1.07e-07!24;UBERON:0000160!2.23e-07!27;UBERON:0005409!3.58e-07!35;UBERON:0000059!4.35e-07!11;UBERON:0001987!4.83e-07!4;UBERON:0004340!4.83e-07!4;UBERON:0001155!7.92e-07!9;UBERON:0004119!9.93e-07!169;UBERON:0000925!9.93e-07!169;UBERON:0006595!9.93e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!5.11e-14!14;UBERON:0000158!5.11e-14!14;UBERON:0003124!8.03e-11!7;UBERON:0004923!3.31e-08!57;UBERON:0000478!1.07e-07!24;UBERON:0000160!2.23e-07!27;UBERON:0005409!3.58e-07!35;UBERON:0000059!4.35e-07!11;UBERON:0001987!4.83e-07!4;UBERON:0004340!4.83e-07!4;UBERON:0001155!7.92e-07!9;UBERON:0004119!9.93e-07!169;UBERON:0000925!9.93e-07!169;UBERON:0006595!9.93e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.76e-22;10!UBERON:0000158;6.76e-22;10!UBERON:0000478;1.37e-21;24!UBERON:0001987;8.13e-20;4!UBERON:0000160;4.79e-15;17!UBERON:0003124;2.16e-14;3!UBERON:0000920;2.16e-14;3!UBERON:0005409;1.68e-11;22!UBERON:0000305;6.25e-11;7!UBERON:0000059;2.80e-10;11!UBERON:0001155;1.98e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.00e-38,14;UBERON:0000158,1.00e-38,14;UBERON:0003124,3.19e-32,7;UBERON:0000478,1.21e-21,24;UBERON:0001987,1.06e-19,4;UBERON:0004340,1.06e-19,4;UBERON:0000160,4.28e-15,17;UBERON:0004871,7.82e-15,8;UBERON:0000920,2.66e-14,3;UBERON:0000305,4.08e-11,7;UBERON:0000059,1.60e-10,11;UBERON:0005409,4.60e-10,25;UBERON:0001155,1.35e-08,9;UBERON:0004175,1.90e-08,25;UBERON:0004923,9.69e-08,66;UBERON:0000995,1.27e-07,21;UBERON:0005795,3.02e-07,22;UBERON:0003975,3.02e-07,22 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,10.2667444901181,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,2.17847724779836,0.538842688278752,2.28846664358842,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,5.03032699271367,0,0,0,0,0,0.150238058906597,0.794025282120147,0,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.464775771478074,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,0,0,0,0,0,1.10689594688802,0.343135620597051,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0.70445216541493,0,0,0,0,4.29243081047436,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.514414748524284,0,0.799266537048298,0.714889968290738,0,0,0,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,14.2469958579742,18.3078983461547,6.95497674658265,1.48864684691266,0.153461973288062,0,0.640695746278505,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0.966875596732978,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572499546967965,0.372158369359667,0.316379424718726,1.5250415513906,0,0,0,0,0.179872457583315,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.47748896947538,1.48482340416319,1.84296421259539,0,0.140669416410513,0,0,0,0.597743964753209,2.21027132424918,0,0,0,0,0,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.520855522170466,2.36141999989728,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.557694977114413,2.92410982314429,0,0,0,0.108647371922008,1.27600463892768,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,4.97630965539252,1.85760885457012,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0.347119476670262,0,0,2.44617335538842,0,0,0,0,0,0,0,0,0,0,2.54216797555244,0,0.426905989478705,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.709048640765013,1.15382201733633,0.808842526250219,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,3.52407511158336,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0,0.734210113519403,0.358177682162975,0.926404341482917,0.657852148736121,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,1.1531308121143,0,0,0,0,0.236387681767936,0.889851215136553,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0.098150233615243,1.21917924982269,0,0,0,0,0.935757853848423,0,0,0.45178432815584,0,0.603851374266694,2.08370226891451,0.874238242015829,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0.218531143927391,0,0.203977659483963,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,1.57788851863888,0,0.325613074443898,0,0,0.359300808426348,0,1.34465588601153,0.406896178315738,0,0,0 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|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,10.2667444901181,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,2.17847724779836,0.538842688278752,2.28846664358842,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,5.03032699271367,0,0,0,0,0,0.150238058906597,0.794025282120147,0,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.464775771478074,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,0,0,0,0,0,1.10689594688802,0.343135620597051,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0.70445216541493,0,0,0,0,4.29243081047436,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.514414748524284,0,0.799266537048298,0.714889968290738,0,0,0,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,14.2469958579742,18.3078983461547,6.95497674658265,1.48864684691266,0.153461973288062,0,0.640695746278505,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0.966875596732978,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572499546967965,0.372158369359667,0.316379424718726,1.5250415513906,0,0,0,0,0.179872457583315,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.47748896947538,1.48482340416319,1.84296421259539,0,0.140669416410513,0,0,0,0.597743964753209,2.21027132424918,0,0,0,0,0,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.520855522170466,2.36141999989728,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.557694977114413,2.92410982314429,0,0,0,0.108647371922008,1.27600463892768,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,4.97630965539252,1.85760885457012,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0.347119476670262,0,0,2.44617335538842,0,0,0,0,0,0,0,0,0,0,2.54216797555244,0,0.426905989478705,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.709048640765013,1.15382201733633,0.808842526250219,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,3.52407511158336,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0,0.734210113519403,0.358177682162975,0.926404341482917,0.657852148736121,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,1.1531308121143,0,0,0,0,0.236387681767936,0.889851215136553,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0.098150233615243,1.21917924982269,0,0,0,0,0.935757853848423,0,0,0.45178432815584,0,0.603851374266694,2.08370226891451,0.874238242015829,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0.218531143927391,0,0.203977659483963,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,1.57788851863888,0,0.325613074443898,0,0,0.359300808426348,0,1.34465588601153,0.406896178315738,0,0,0 | ||
|short_description=p1@ENST00000447171,p1@uc003tab.2 | |short_description=p1@ENST00000447171,p1@uc003tab.2 | ||
}} | }} |
Latest revision as of 09:15, 31 July 2015
Short description: | p1@ENST00000447171, p1@uc003tab.2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000447171_5end, CAGE_peak_1_at_uc003tab.2_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | 0bp_to_ENST00000447171, uc003tab.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.00e-23 | 19 |
placental epithelial cell | 8.94e-16 | 3 |
chorionic membrane mesenchymal stem cell | 2.66e-14 | 3 |
amniotic epithelial cell | 5.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.00e-38 | 14 |
membranous layer | 1.00e-38 | 14 |
chorion | 3.19e-32 | 7 |
extraembryonic structure | 1.21e-21 | 24 |
placenta | 1.06e-19 | 4 |
allantois | 1.06e-19 | 4 |
intestine | 4.28e-15 | 17 |
somatic layer of lateral plate mesoderm | 7.82e-15 | 8 |
egg chorion | 2.66e-14 | 3 |
amnion | 4.08e-11 | 7 |
large intestine | 1.60e-10 | 11 |
gastrointestinal system | 4.60e-10 | 25 |
colon | 1.35e-08 | 9 |
internal genitalia | 1.90e-08 | 25 |
organ component layer | 9.69e-08 | 66 |
uterus | 1.27e-07 | 21 |
embryonic uterus | 3.02e-07 | 22 |
internal female genitalia | 3.02e-07 | 22 |