FFCP PHASE1:Hg19::chr5:115782117..115782137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:115782117..115782137,- | |||
|coexpression_cluster_id=C1950 | |coexpression_cluster_id=C1950 | ||
|description=CAGE_peak_at_chr5:115782117..115782137,- | |description=CAGE_peak_at_chr5:115782117..115782137,- | ||
|id=chr5:115782117..115782137,- | |id=chr5:115782117..115782137,- | ||
|ontology_enrichment_celltype=CL:0000148!2.28e-08!10;CL:0000541!2.28e-08!10;CL:0002322!5.11e-08!5;CL:0000147!9.89e-08!14 | |ontology_enrichment_celltype=CL:0000148!2.28e-08!10;CL:0000541!2.28e-08!10;CL:0002322!5.11e-08!5;CL:0000147!9.89e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;8.82e-22;10!CL:0002322;4.15e-19;5!CL:0000147;3.75e-15;14!CL:0000710;3.49e-10;20!CL:0000540;3.10e-09;6!CL:0000404;3.10e-09;6!CL:0000075;5.17e-09;27!CL:0000039;1.83e-08;7!CL:0000586;1.83e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.03e-21,10;CL:0000541,1.03e-21,10;CL:0002322,3.38e-19,5;CL:0000147,4.17e-15,14;CL:0000047,6.51e-11,8;CL:0000710,3.74e-10,20;CL:0000540,1.75e-09,6;CL:0000031,1.75e-09,6;CL:0000404,1.75e-09,6;CL:0000075,6.23e-09,27;CL:0000039,2.58e-08,7;CL:0000586,2.58e-08,7;CL:0000133,6.28e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.72e-13;10!UBERON:0005564;8.72e-13;10!CL:0000031;3.10e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002420;6.60e-13;9!UBERON:0000125;6.60e-13;9!UBERON:0007245;6.60e-13;9!UBERON:0002308;6.60e-13;9!UBERON:0010009;6.60e-13;9!UBERON:0010011;6.60e-13;9!UBERON:0000454;6.60e-13;9!UBERON:0003528;4.61e-11;34!UBERON:0002020;4.61e-11;34!UBERON:0000073;1.02e-10;53!UBERON:0002616;1.02e-10;53!UBERON:0000988;1.63e-10;3!UBERON:0002298;3.10e-09;6!UBERON:0004732;6.74e-09;13!UBERON:0002784;1.06e-08;4!UBERON:0002780;1.39e-08;41!UBERON:0001890;1.39e-08;41!UBERON:0002791;1.43e-08;32!UBERON:0001905;3.78e-08;2!UBERON:0002757;3.78e-08;2!UBERON:0010134;3.78e-08;2!UBERON:0005408;3.78e-08;2!UBERON:0001899;3.78e-08;2!UBERON:0002771;6.19e-08;2!UBERON:0001871;6.39e-08;6!UBERON:0009663;6.39e-08;7!UBERON:0001893;6.65e-08;34!UBERON:0003135;7.21e-08;11!UBERON:0001017;7.45e-08;75!UBERON:0001876;1.46e-07;2!UBERON:0002148;1.46e-07;2!UBERON:0001875;1.46e-07;2!UBERON:0006331;1.46e-07;2!UBERON:0009662;1.46e-07;2!UBERON:0006514;1.46e-07;2!UBERON:0000473;2.11e-07;8!UBERON:0001869;4.11e-07;32!UBERON:0001016;5.77e-07;83!UBERON:0000955;6.92e-07;68!UBERON:0004733;8.36e-07;12!UBERON:0002028;8.36e-07;12 | |||
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|short_description=p@chr5:115782117..115782137,- | |short_description=p@chr5:115782117..115782137,- | ||
}} | }} |
Latest revision as of 08:55, 30 July 2015
Short description: | p@chr5:115782117..115782137, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115782117..115782137, - |
Coexpression cluster: | C1950_testicular_H9_teratocarcinoma_Neural_iPS_small_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.03e-21 | 10 |
melanoblast | 1.03e-21 | 10 |
embryonic stem cell | 3.38e-19 | 5 |
pigment cell | 4.17e-15 | 14 |
neuronal stem cell | 6.51e-11 | 8 |
neurecto-epithelial cell | 3.74e-10 | 20 |
neuron | 1.75e-09 | 6 |
neuroblast | 1.75e-09 | 6 |
electrically signaling cell | 1.75e-09 | 6 |
columnar/cuboidal epithelial cell | 6.23e-09 | 27 |
germ line cell | 2.58e-08 | 7 |
germ cell | 2.58e-08 | 7 |
neurectodermal cell | 6.28e-07 | 59 |