FFCP PHASE1:Hg19::chr2:105490830..105490865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:105490830..105490865,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_at_chr2:105490830..105490865,- | |||
|id=chr2:105490830..105490865,- | |||
|ontology_enrichment_celltype=CL:1000507!1.07e-25!12;CL:1000494!1.07e-25!12;CL:0000239!2.14e-20!3;CL:1000615!2.14e-20!3;CL:0002306!2.14e-20!3;CL:1000449!4.47e-19!16;CL:1000497!7.24e-17!18;CL:0002518!7.24e-17!18;CL:0002367!3.01e-14!2;CL:0002681!1.89e-12!13;CL:0002584!1.89e-12!13;CL:0002605!1.64e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.00e-22;3!CL:1000615;1.00e-22;3!CL:0002306;1.00e-22;3!CL:0002363;1.03e-09;2!CL:0002367;1.17e-09;2!CL:1000507;1.73e-07;10!CL:1000494;1.73e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.04e-23,3;CL:1000615,8.04e-23,3;CL:0002306,8.04e-23,3;CL:0002363,1.03e-09,2;CL:0000008,1.03e-09,2;CL:0002367,1.22e-09,2;CL:1000507,1.62e-07,10;CL:1000494,1.62e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.39e-34;2!UBERON:0005754;1.12e-17;1!UBERON:0005425;1.12e-17;1!UBERON:0003918;1.14e-15;10!UBERON:0007687;1.14e-15;10!CL:0000008;1.03e-09;2!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!5.86e-28!18;UBERON:0002120!5.86e-28!18;UBERON:0004875!5.86e-28!18;UBERON:0005721!5.86e-28!18;UBERON:0005754!5.86e-28!18;UBERON:0007297!5.86e-28!18;UBERON:0002113!1.60e-27!27;UBERON:0003918!1.60e-27!27;UBERON:0005095!1.60e-27!27;UBERON:0007687!1.60e-27!27;UBERON:0009773!1.07e-25!12;UBERON:0001231!1.07e-25!12;UBERON:0004810!1.07e-25!12;UBERON:0004876!5.06e-25!20;UBERON:0003887!9.17e-24!21;UBERON:0000058!1.81e-23!26;UBERON:0006555!1.91e-23!17;UBERON:0005103!1.91e-23!17;UBERON:0000083!1.91e-23!17;UBERON:0009201!1.91e-23!17;UBERON:0004819!1.91e-23!17;UBERON:0006553!1.91e-23!17;UBERON:0003074!1.91e-23!17;UBERON:0003060!1.91e-23!17;UBERON:0000489!6.55e-23!32;UBERON:0006947!7.93e-21!3;UBERON:0004054!7.93e-21!3;UBERON:0003135!1.17e-20!11;UBERON:0006853!2.14e-20!3;UBERON:0007685!2.14e-20!3;UBERON:0004134!2.14e-20!3;UBERON:0004211!4.47e-19!16;UBERON:0001285!4.47e-19!16;UBERON:0007684!4.47e-19!16;UBERON:0003220!4.47e-19!16;UBERON:0004208!4.47e-19!16;UBERON:0006554!4.10e-16!44;UBERON:0005904!9.16e-16!4;UBERON:0001008!1.04e-15!45;UBERON:0005969!3.01e-14!2;UBERON:0003956!3.01e-14!2;UBERON:0003064!7.22e-13!37;UBERON:0000473!7.76e-13!8;UBERON:0005172!1.73e-12!55;UBERON:0005173!1.73e-12!55;UBERON:0003886!1.85e-12!63;UBERON:0001225!1.89e-12!13;UBERON:0008987!1.89e-12!13;UBERON:0002417!4.61e-11!61;UBERON:0000916!4.61e-11!61;UBERON:0002553!5.45e-11!70;UBERON:0003101!4.44e-10!22;UBERON:0000079!4.44e-10!22;UBERON:0001851!4.47e-10!16;UBERON:0003103!1.50e-09!69;UBERON:0000353!1.81e-09!17;UBERON:0001301!3.55e-08!1;UBERON:0001000!4.07e-08!1;UBERON:0005352!4.07e-08!1;UBERON:0000941!5.33e-08!1;UBERON:0004904!5.33e-08!1;UBERON:0002464!5.33e-08!1;UBERON:0001021!5.33e-08!1;UBERON:0001785!5.33e-08!1;UBERON:0000998!5.70e-08!1;UBERON:0006868!5.70e-08!1;UBERON:0002363!1.35e-07!1;UBERON:0007647!1.35e-07!1;UBERON:0010115!1.35e-07!1;UBERON:0003133!1.64e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.30e-49;3!UBERON:0004054;1.30e-49;3!UBERON:0005904;1.95e-37;4!UBERON:0006853;1.00e-22;3!UBERON:0007685;1.00e-22;3!UBERON:0004134;1.00e-22;3!UBERON:0001301;5.72e-18;1!UBERON:0001000;1.12e-17;1!UBERON:0000998;1.12e-17;1!UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0005352;1.12e-17;1!UBERON:0000058;1.97e-15;10!UBERON:0003135;4.32e-14;11!UBERON:0004175;6.05e-13;21!UBERON:0002113;2.08e-11;24!UBERON:0011143;2.08e-11;24!UBERON:0003566;1.03e-09;2!UBERON:0001777;1.03e-09;2!UBERON:0005969;1.17e-09;2!UBERON:0003956;1.17e-09;2!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2!UBERON:0000489;1.71e-09;29!UBERON:0006554;3.48e-09;30!UBERON:0001008;3.48e-09;30!UBERON:0002104;1.02e-07;21!UBERON:0004211;1.73e-07;10!UBERON:0009773;1.73e-07;10!UBERON:0001231;1.73e-07;10!UBERON:0004810;1.73e-07;10!UBERON:0003101;2.44e-07;22!UBERON:0000079;2.44e-07;22!UBERON:0001032;8.09e-07;24!UBERON:0004456;8.09e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.20e-49,3;UBERON:0004054,1.20e-49,3;UBERON:0005904,1.84e-37,4;UBERON:0006853,8.04e-23,3;UBERON:0007685,8.04e-23,3;UBERON:0004134,8.04e-23,3;UBERON:0002113,1.01e-22,26;UBERON:0003918,1.01e-22,26;UBERON:0011143,1.01e-22,26;UBERON:0005095,1.01e-22,26;UBERON:0007687,1.01e-22,26;UBERON:0000489,4.81e-19,31;UBERON:0001301,5.26e-18,1;UBERON:0001000,7.37e-18,1;UBERON:0005352,7.37e-18,1;UBERON:0000941,1.44e-17,1;UBERON:0001785,1.44e-17,1;UBERON:0002464,1.44e-17,1;UBERON:0004904,1.44e-17,1;UBERON:0001021,1.44e-17,1;UBERON:0003902,1.44e-17,1;UBERON:0005425,1.44e-17,1;UBERON:0000998,1.70e-17,1;UBERON:0006868,1.70e-17,1;UBERON:0003135,4.22e-14,11;UBERON:0006554,1.63e-12,47;UBERON:0001008,2.99e-12,48;UBERON:0004175,6.25e-11,25;UBERON:0005172,7.21e-11,54;UBERON:0005173,7.21e-11,54;UBERON:0006555,6.47e-10,16;UBERON:0004819,6.47e-10,16;UBERON:0002417,9.24e-10,60;UBERON:0000916,9.24e-10,60;UBERON:0003566,1.03e-09,2;UBERON:0001777,1.03e-09,2;UBERON:0005969,1.22e-09,2;UBERON:0003956,1.22e-09,2;UBERON:0003714,1.86e-09,2;UBERON:0005162,1.86e-09,2;UBERON:0000122,1.86e-09,2;UBERON:0003103,1.38e-08,68;UBERON:0000058,2.04e-08,19;UBERON:0000080,2.96e-08,9;UBERON:0002120,2.96e-08,9;UBERON:0004875,2.96e-08,9;UBERON:0005721,2.96e-08,9;UBERON:0005754,2.96e-08,9;UBERON:0007297,2.96e-08,9;UBERON:0000019,4.68e-08,20;UBERON:0000047,4.68e-08,20;UBERON:0010312,4.68e-08,20;UBERON:0004088,4.68e-08,20;UBERON:0010230,4.68e-08,20;UBERON:0003072,4.68e-08,20;UBERON:0004128,4.68e-08,20;UBERON:0003071,4.68e-08,20;UBERON:0000970,1.07e-07,21;UBERON:0002104,1.07e-07,21;UBERON:0004810,1.62e-07,10;UBERON:0001456,2.26e-07,22;UBERON:0003101,2.41e-07,22;UBERON:0000079,2.41e-07,22;UBERON:0004876,6.54e-07,11;UBERON:0000020,8.42e-07,24;UBERON:0001032,8.42e-07,24;UBERON:0004456,8.42e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23960871167747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,1.78413391131527,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,2.0996083214699,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0.126373159256976,0,0,0,0,0,0,15.084305939579,0,0,0,0,2.62090002363045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.77190770510057,18.0968329065743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:105490830..105490865,- | |||
}} |
Latest revision as of 22:58, 28 July 2015
Short description: | p@chr2:105490830..105490865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:105490830..105490865, - |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.04e-23 | 3 |
kidney cortex tubule cell | 8.04e-23 | 3 |
epithelial cell of proximal tubule | 8.04e-23 | 3 |
keratocyte | 1.03e-09 | 2 |
migratory cranial neural crest cell | 1.03e-09 | 2 |
trabecular meshwork cell | 1.22e-09 | 2 |
kidney tubule cell | 1.62e-07 | 10 |
nephron tubule epithelial cell | 1.62e-07 | 10 |