FFCP PHASE1:Hg19::chr2:105490830..105490865,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:105490830..105490865,-
|short_description=p@chr2:105490830..105490865,-
|description=CAGE_peak_at_chr2:105490830..105490865,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:105490830..105490865,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_at_chr2:105490830..105490865,- | |||
|id=chr2:105490830..105490865,- | |||
|ontology_enrichment_celltype=CL:1000507!1.07e-25!12;CL:1000494!1.07e-25!12;CL:0000239!2.14e-20!3;CL:1000615!2.14e-20!3;CL:0002306!2.14e-20!3;CL:1000449!4.47e-19!16;CL:1000497!7.24e-17!18;CL:0002518!7.24e-17!18;CL:0002367!3.01e-14!2;CL:0002681!1.89e-12!13;CL:0002584!1.89e-12!13;CL:0002605!1.64e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.00e-22;3!CL:1000615;1.00e-22;3!CL:0002306;1.00e-22;3!CL:0002363;1.03e-09;2!CL:0002367;1.17e-09;2!CL:1000507;1.73e-07;10!CL:1000494;1.73e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.04e-23,3;CL:1000615,8.04e-23,3;CL:0002306,8.04e-23,3;CL:0002363,1.03e-09,2;CL:0000008,1.03e-09,2;CL:0002367,1.22e-09,2;CL:1000507,1.62e-07,10;CL:1000494,1.62e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.39e-34;2!UBERON:0005754;1.12e-17;1!UBERON:0005425;1.12e-17;1!UBERON:0003918;1.14e-15;10!UBERON:0007687;1.14e-15;10!CL:0000008;1.03e-09;2!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;1.30e-49;3!UBERON:0004054;1.30e-49;3!UBERON:0005904;1.95e-37;4!UBERON:0006853;1.00e-22;3!UBERON:0007685;1.00e-22;3!UBERON:0004134;1.00e-22;3!UBERON:0001301;5.72e-18;1!UBERON:0001000;1.12e-17;1!UBERON:0000998;1.12e-17;1!UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0005352;1.12e-17;1!UBERON:0000058;1.97e-15;10!UBERON:0003135;4.32e-14;11!UBERON:0004175;6.05e-13;21!UBERON:0002113;2.08e-11;24!UBERON:0011143;2.08e-11;24!UBERON:0003566;1.03e-09;2!UBERON:0001777;1.03e-09;2!UBERON:0005969;1.17e-09;2!UBERON:0003956;1.17e-09;2!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2!UBERON:0000489;1.71e-09;29!UBERON:0006554;3.48e-09;30!UBERON:0001008;3.48e-09;30!UBERON:0002104;1.02e-07;21!UBERON:0004211;1.73e-07;10!UBERON:0009773;1.73e-07;10!UBERON:0001231;1.73e-07;10!UBERON:0004810;1.73e-07;10!UBERON:0003101;2.44e-07;22!UBERON:0000079;2.44e-07;22!UBERON:0001032;8.09e-07;24!UBERON:0004456;8.09e-07;24 | |||
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|short_description=p@chr2:105490830..105490865,- | |||
}} | }} |
Latest revision as of 22:58, 28 July 2015
Short description: | p@chr2:105490830..105490865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:105490830..105490865, - |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.04e-23 | 3 |
kidney cortex tubule cell | 8.04e-23 | 3 |
epithelial cell of proximal tubule | 8.04e-23 | 3 |
keratocyte | 1.03e-09 | 2 |
migratory cranial neural crest cell | 1.03e-09 | 2 |
trabecular meshwork cell | 1.22e-09 | 2 |
kidney tubule cell | 1.62e-07 | 10 |
nephron tubule epithelial cell | 1.62e-07 | 10 |