FFCP PHASE1:Hg19::chr22:46880166..46880186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:46880166..46880186,- | |||
|coexpression_cluster_id=C4108 | |coexpression_cluster_id=C4108 | ||
|description=CAGE_peak_at_chr22:46880166..46880186,- | |description=CAGE_peak_at_chr22:46880166..46880186,- | ||
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|ontology_enrichment_celltype=CL:1000507!4.85e-29!12;CL:1000494!4.85e-29!12;CL:1000497!5.27e-27!18;CL:0002518!5.27e-27!18;CL:1000449!9.20e-26!16;CL:0002681!6.40e-17!13;CL:0002584!6.40e-17!13;CL:0000239!5.60e-12!3;CL:1000615!5.60e-12!3;CL:0002306!5.60e-12!3;CL:0000669!6.19e-07!5 | |ontology_enrichment_celltype=CL:1000507!4.85e-29!12;CL:1000494!4.85e-29!12;CL:1000497!5.27e-27!18;CL:0002518!5.27e-27!18;CL:1000449!9.20e-26!16;CL:0002681!6.40e-17!13;CL:0002584!6.40e-17!13;CL:0000239!5.60e-12!3;CL:1000615!5.60e-12!3;CL:0002306!5.60e-12!3;CL:0000669!6.19e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.54e-33;10!CL:1000494;5.54e-33;10!CL:1000449;4.94e-22;15!CL:1000497;1.89e-19;17!CL:0002518;1.89e-19;17!CL:0000313;6.22e-15;1!CL:0002537;6.70e-12;5!CL:0002681;1.79e-10;12!CL:0002584;1.79e-10;12!CL:0000159;4.09e-08;2!CL:0000650;7.52e-08;2!CL:1000500;7.52e-08;2!CL:1000618;7.52e-08;2!CL:1001318;7.52e-08;2!CL:0002173;7.52e-08;2!CL:0000349;5.99e-07;19 | |ontology_enrichment_celltype_v019=CL:1000507;5.54e-33;10!CL:1000494;5.54e-33;10!CL:1000449;4.94e-22;15!CL:1000497;1.89e-19;17!CL:0002518;1.89e-19;17!CL:0000313;6.22e-15;1!CL:0002537;6.70e-12;5!CL:0002681;1.79e-10;12!CL:0002584;1.79e-10;12!CL:0000159;4.09e-08;2!CL:0000650;7.52e-08;2!CL:1000500;7.52e-08;2!CL:1000618;7.52e-08;2!CL:1001318;7.52e-08;2!CL:0002173;7.52e-08;2!CL:0000349;5.99e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.11e-33,10;CL:1000494,4.11e-33,10;CL:1000449,4.06e-22,15;CL:1000497,1.59e-19,17;CL:0002518,1.59e-19,17;CL:0000313,6.22e-15,1;CL:0002537,6.70e-12,5;CL:0002681,1.63e-10,12;CL:0002584,1.63e-10,12;CL:0000159,4.09e-08,2;CL:0000650,7.52e-08,2;CL:1000500,7.52e-08,2;CL:1000618,7.52e-08,2;CL:1001318,7.52e-08,2;CL:0002173,7.52e-08,2;CL:0000349,5.87e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!6.09e-08!2 | |ontology_enrichment_disease=DOID:4468!6.09e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:2152;6.22e-15;1 | |ontology_enrichment_disease_v019=DOID:2152;6.22e-15;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,6.22e-15,1 | |||
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| ||
|short_description=p@chr22:46880166..46880186,- | |short_description=p@chr22:46880166..46880186,- | ||
}} | }} |
Latest revision as of 22:09, 28 July 2015
Short description: | p@chr22:46880166..46880186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:46880166..46880186, - |
Coexpression cluster: | C4108_amniotic_serous_small_chorionic_colon_adenocarcinoma_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.11e-33 | 10 |
nephron tubule epithelial cell | 4.11e-33 | 10 |
epithelial cell of nephron | 4.06e-22 | 15 |
kidney cell | 1.59e-19 | 17 |
kidney epithelial cell | 1.59e-19 | 17 |
serous secreting cell | 6.22e-15 | 1 |
amnion mesenchymal stem cell | 6.70e-12 | 5 |
kidney cortical cell | 1.63e-10 | 12 |
renal cortical epithelial cell | 1.63e-10 | 12 |
seromucus secreting cell | 4.09e-08 | 2 |
mesangial cell | 7.52e-08 | 2 |
kidney interstitial cell | 7.52e-08 | 2 |
juxtaglomerular complex cell | 7.52e-08 | 2 |
renal interstitial pericyte | 7.52e-08 | 2 |
extraglomerular mesangial cell | 7.52e-08 | 2 |
extraembryonic cell | 5.87e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.22e-15 | 1 |