FFCP PHASE1:Hg19::chr20:60937512..60937526,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:60937512..60937526,- | |||
|description=CAGE_peak_at_chr20:60937512..60937526,- | |description=CAGE_peak_at_chr20:60937512..60937526,- | ||
|id=chr20:60937512..60937526,- | |id=chr20:60937512..60937526,- | ||
|ontology_enrichment_celltype=CL:0000066!7.74e-16!254;CL:0000223!4.32e-09!59;CL:0002076!8.18e-09!43 | |ontology_enrichment_celltype=CL:0000066!7.74e-16!254;CL:0000223!4.32e-09!59;CL:0002076!8.18e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.16e-21;1!CL:1000746;2.98e-12;7!CL:1000612;2.98e-12;7!CL:0000159;3.34e-11;2!CL:0000650;3.34e-11;2!CL:1000500;3.34e-11;2!CL:1000618;3.34e-11;2!CL:1001318;3.34e-11;2!CL:0002173;3.34e-11;2!CL:0002593;3.34e-11;2!CL:0000632;6.78e-08;3!CL:0002681;1.57e-07;12!CL:0002584;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.22e-21,1;CL:1000746,2.82e-12,7;CL:1000612,2.82e-12,7;CL:0000650,2.47e-11,2;CL:1000500,2.47e-11,2;CL:1000618,2.47e-11,2;CL:1001318,2.47e-11,2;CL:0002173,2.47e-11,2;CL:0000159,3.02e-11,2;CL:0002593,4.52e-11,2;CL:0000632,5.93e-08,3;CL:0002681,1.52e-07,12;CL:0002584,1.52e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.35e-14!106;DOID:0050687!2.71e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.16e-21;1!DOID:4929;2.02e-11;2!DOID:4556;4.84e-08;3!DOID:299;7.66e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.22e-21,1;DOID:4929,1.82e-11,2;DOID:4556,4.84e-08,3;DOID:299,7.48e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.03e-10!169;UBERON:0000925!7.03e-10!169;UBERON:0006595!7.03e-10!169;UBERON:0001007!8.16e-09!155;UBERON:0001555!8.16e-09!155;UBERON:0007026!8.16e-09!155;UBERON:0000481!1.11e-08!347;UBERON:0004921!2.86e-08!129;UBERON:0004185!2.86e-08!129;UBERON:0001041!9.58e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.16e-21;1!UBERON:0000074;2.98e-12;7!UBERON:0001229;2.98e-12;7!UBERON:0003567;3.34e-11;2!UBERON:0003838;3.34e-11;2!UBERON:0003586;3.34e-11;2!UBERON:0004909;3.34e-11;2!UBERON:0005169;3.34e-11;2!UBERON:0002321;3.34e-11;2!UBERON:0002456;3.34e-11;2!UBERON:0005215;3.34e-11;2!UBERON:0002303;3.34e-11;2!UBERON:0002319;3.34e-11;2!UBERON:0001225;1.57e-07;12!UBERON:0008987;1.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.22e-21,1;UBERON:0010532,2.82e-12,7;UBERON:0000074,2.82e-12,7;UBERON:0001229,2.82e-12,7;UBERON:0001230,2.82e-12,7;UBERON:0003220,2.82e-12,7;UBERON:0005749,2.82e-12,7;UBERON:0004199,2.82e-12,7;UBERON:0004209,2.82e-12,7;UBERON:0004198,2.82e-12,7;UBERON:0003567,2.47e-11,2;UBERON:0003838,2.47e-11,2;UBERON:0003586,2.47e-11,2;UBERON:0005169,2.47e-11,2;UBERON:0002321,2.47e-11,2;UBERON:0005215,2.47e-11,2;UBERON:0002303,2.47e-11,2;UBERON:0002319,2.47e-11,2;UBERON:0004909,3.02e-11,2;UBERON:0002456,4.52e-11,2;UBERON:0005103,7.30e-11,8;UBERON:0000083,7.30e-11,8;UBERON:0009201,7.30e-11,8;UBERON:0006553,7.30e-11,8;UBERON:0003074,7.30e-11,8;UBERON:0003060,7.30e-11,8;UBERON:0000080,9.24e-10,9;UBERON:0002120,9.24e-10,9;UBERON:0004875,9.24e-10,9;UBERON:0005721,9.24e-10,9;UBERON:0005754,9.24e-10,9;UBERON:0007297,9.24e-10,9;UBERON:0004876,3.76e-08,11;UBERON:0001225,1.52e-07,12;UBERON:0008987,1.52e-07,12;UBERON:0003887,1.52e-07,12 | |||
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| ||
|short_description=p@chr20:60937512..60937526,- | |short_description=p@chr20:60937512..60937526,- | ||
}} | }} |
Latest revision as of 16:08, 28 July 2015
Short description: | p@chr20:60937512..60937526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:60937512..60937526, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.22e-21 | 1 |
glomerular cell | 2.82e-12 | 7 |
kidney corpuscule cell | 2.82e-12 | 7 |
mesangial cell | 2.47e-11 | 2 |
kidney interstitial cell | 2.47e-11 | 2 |
juxtaglomerular complex cell | 2.47e-11 | 2 |
renal interstitial pericyte | 2.47e-11 | 2 |
extraglomerular mesangial cell | 2.47e-11 | 2 |
seromucus secreting cell | 3.02e-11 | 2 |
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
hepatic stellate cell | 5.93e-08 | 3 |
kidney cortical cell | 1.52e-07 | 12 |
renal cortical epithelial cell | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.22e-21 | 1 |
tubular adenocarcinoma | 1.82e-11 | 2 |
lung large cell carcinoma | 4.84e-08 | 3 |
adenocarcinoma | 7.48e-08 | 25 |