FFCP PHASE1:Hg19::chr20:36757658..36757727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36757658..36757727,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36757658..36757727,- | |description=CAGE_peak_at_chr20:36757658..36757727,- | ||
|id=chr20:36757658..36757727,- | |id=chr20:36757658..36757727,- | ||
|ontology_enrichment_celltype=CL:0000222!2.41e-12!119;CL:0000192!3.37e-12!42;CL:0000514!3.37e-12!42;CL:0000115!4.49e-11!35;CL:0002139!1.49e-10!24;CL:0000359!1.77e-09!32;CL:0002078!3.19e-09!44;CL:0000183!5.48e-09!59;CL:0000187!2.99e-08!54;CL:0000071!1.26e-07!18;CL:0002546!1.26e-07!18;CL:0000680!1.64e-07!57;CL:0000056!1.64e-07!57;CL:0000355!1.64e-07!57 | |ontology_enrichment_celltype=CL:0000222!2.41e-12!119;CL:0000192!3.37e-12!42;CL:0000514!3.37e-12!42;CL:0000115!4.49e-11!35;CL:0002139!1.49e-10!24;CL:0000359!1.77e-09!32;CL:0002078!3.19e-09!44;CL:0000183!5.48e-09!59;CL:0000187!2.99e-08!54;CL:0000071!1.26e-07!18;CL:0002546!1.26e-07!18;CL:0000680!1.64e-07!57;CL:0000056!1.64e-07!57;CL:0000355!1.64e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.91e-14;36!CL:0002139;7.68e-14;24!CL:0000349;2.63e-12;19!CL:0000071;3.33e-10;18!CL:0002078;2.57e-09;45!CL:0000192;5.87e-08;43!CL:0000359;1.22e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.36e-17,36;CL:0000222,1.04e-14,121;CL:0002078,3.67e-14,45;CL:0002139,3.93e-14,24;CL:0000349,3.57e-12,19;CL:0000192,8.98e-11,43;CL:0000514,8.98e-11,43;CL:0000071,1.92e-10,18;CL:0002546,1.92e-10,18;CL:0000213,2.80e-09,58;CL:0000215,2.80e-09,58;CL:0000359,6.01e-08,32;CL:0000187,1.26e-07,55;CL:0000680,6.80e-07,58;CL:0000056,6.80e-07,58;CL:0000355,6.80e-07,58;CL:0002188,8.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.33e-10;18!CL:0000514;5.87e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.03e-26!118;UBERON:0002049!3.13e-25!79;UBERON:0007798!3.13e-25!79;UBERON:0000055!4.99e-24!69;UBERON:0004872!2.55e-21!84;UBERON:0001981!8.81e-21!60;UBERON:0007500!8.81e-21!60;UBERON:0004537!8.81e-21!60;UBERON:0006965!8.81e-21!60;UBERON:0001009!5.70e-19!113;UBERON:0000477!8.72e-19!286;UBERON:0004535!1.87e-17!110;UBERON:0004111!8.71e-17!241;UBERON:0000490!1.99e-16!138;UBERON:0000119!2.25e-15!312;UBERON:0000483!7.27e-15!309;UBERON:0000025!7.03e-14!194;UBERON:0005256!9.89e-14!143;UBERON:0001637!1.13e-13!42;UBERON:0003509!1.13e-13!42;UBERON:0004572!1.13e-13!42;UBERON:0000481!1.19e-11!347;UBERON:0002100!1.94e-11!216;UBERON:0000468!3.56e-11!659;UBERON:0004573!4.16e-11!33;UBERON:0004571!4.16e-11!33;UBERON:0003104!1.30e-09!238;UBERON:0009142!1.30e-09!238;UBERON:0000926!2.22e-09!448;UBERON:0004120!2.22e-09!448;UBERON:0006603!2.22e-09!448;UBERON:0000467!6.35e-09!625;UBERON:0000480!8.84e-09!626;UBERON:0005631!9.41e-09!14;UBERON:0000158!9.41e-09!14;UBERON:0002385!1.06e-07!63;UBERON:0001015!1.06e-07!63;UBERON:0000383!1.06e-07!63;UBERON:0001986!1.26e-07!18;UBERON:0004638!1.26e-07!18;UBERON:0004852!1.26e-07!18;UBERON:0000487!1.39e-07!22;UBERON:0006554!1.42e-07!44;UBERON:0000478!2.25e-07!24;UBERON:0001134!2.33e-07!61;UBERON:0002036!2.33e-07!61;UBERON:0003082!2.33e-07!61;UBERON:0003103!2.51e-07!69;UBERON:0000947!2.65e-07!21;UBERON:0010191!2.65e-07!21;UBERON:0000058!3.49e-07!26;UBERON:0001008!3.74e-07!45;UBERON:0002050!3.92e-07!605;UBERON:0005423!3.92e-07!605;UBERON:0003064!4.81e-07!37;UBERON:0004290!5.30e-07!70;UBERON:0000064!6.03e-07!219;UBERON:0000923!6.98e-07!604;UBERON:0005291!6.98e-07!604;UBERON:0006598!6.98e-07!604;UBERON:0002532!6.98e-07!604;UBERON:0004923!8.07e-07!57;UBERON:0000922!8.26e-07!612;UBERON:0000486!8.48e-07!82;UBERON:0006914!9.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.92e-12;24!UBERON:0003914;1.64e-11;74!UBERON:0007500;1.34e-10;56!UBERON:0001981;1.34e-10;56!UBERON:0004537;1.34e-10;56!UBERON:0000055;1.41e-10;65!UBERON:0002049;1.59e-10;75!UBERON:0007798;1.59e-10;75!UBERON:0004638;3.33e-10;18!UBERON:0001986;3.33e-10;18!UBERON:0004852;3.33e-10;18!UBERON:0004573;5.75e-10;33!UBERON:0004571;5.75e-10;33!UBERON:0001637;6.34e-10;42!UBERON:0003509;6.34e-10;42!UBERON:0004572;6.34e-10;42!UBERON:0000487;3.64e-09;22!UBERON:0006914;1.18e-08;25!UBERON:0001009;1.75e-08;112!UBERON:0005631;2.61e-08;10!UBERON:0000158;2.61e-08;10!UBERON:0000947;1.89e-07;21!UBERON:0010191;1.89e-07;21!UBERON:0010260;2.83e-07;9!UBERON:0003513;3.88e-07;7!UBERON:0000490;4.90e-07;33 | |||
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| ||
|short_description=p@chr20:36757658..36757727,- | |short_description=p@chr20:36757658..36757727,- | ||
}} | }} |
Latest revision as of 13:50, 28 July 2015
Short description: | p@chr20:36757658..36757727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36757658..36757727, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.36e-17 | 36 |
mesodermal cell | 1.04e-14 | 121 |
meso-epithelial cell | 3.67e-14 | 45 |
endothelial cell of vascular tree | 3.93e-14 | 24 |
extraembryonic cell | 3.57e-12 | 19 |
smooth muscle cell | 8.98e-11 | 43 |
smooth muscle myoblast | 8.98e-11 | 43 |
blood vessel endothelial cell | 1.92e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-10 | 18 |
lining cell | 2.80e-09 | 58 |
barrier cell | 2.80e-09 | 58 |
vascular associated smooth muscle cell | 6.01e-08 | 32 |
muscle cell | 1.26e-07 | 55 |
muscle precursor cell | 6.80e-07 | 58 |
myoblast | 6.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.80e-07 | 58 |
glomerular endothelial cell | 8.28e-07 | 5 |