FFCP PHASE1:Hg19::chr1:858638..858648,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:858638..858648,+
|short_description=p@chr1:858638..858648,+
|description=CAGE_peak_at_chr1:858638..858648,+
|association_with_transcript=NA
|EntrezGene=NA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:858638..858648,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr1:858638..858648,+ | |||
|id=chr1:858638..858648,+ | |||
|ontology_enrichment_celltype=CL:0000319!9.70e-10!1;CL:0002620!5.36e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0000650;5.96e-34;2!CL:1000500;5.96e-34;2!CL:1000618;5.96e-34;2!CL:1001318;5.96e-34;2!CL:0002173;5.96e-34;2!CL:0000669;9.45e-18;4!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:1000507;6.34e-08;10!CL:1000494;6.34e-08;10!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,7.05e-34,2;CL:1000500,7.05e-34,2;CL:1000618,7.05e-34,2;CL:1001318,7.05e-34,2;CL:0002173,7.05e-34,2;CL:0000669,1.03e-17,4;CL:1000746,9.89e-11,7;CL:1000612,9.89e-11,7;CL:1000507,6.56e-08,10;CL:1000494,6.56e-08,10;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:3030!9.70e-10!1;DOID:17!8.83e-08!5;DOID:450!8.83e-08!5;DOID:66!8.83e-08!5;DOID:423!8.83e-08!5;DOID:0080000!8.83e-08!5;DOID:11722!8.83e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006834!2.08e-09!1;UBERON:0000310!7.18e-08!10;UBERON:0000966!1.32e-07!5;UBERON:0005388!1.32e-07!5;UBERON:0001802!1.32e-07!5;UBERON:0001443!3.38e-07!11;UBERON:0002097!3.93e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.96e-34;2!UBERON:0003838;5.96e-34;2!UBERON:0003586;5.96e-34;2!UBERON:0005169;5.96e-34;2!UBERON:0002321;5.96e-34;2!UBERON:0005215;5.96e-34;2!UBERON:0002303;5.96e-34;2!UBERON:0002319;5.96e-34;2!UBERON:0003891;9.45e-18;4!UBERON:0002113;4.20e-12;24!UBERON:0011143;4.20e-12;24!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0000489;3.24e-10;29!UBERON:0006554;6.52e-10;30!UBERON:0001008;6.52e-10;30!UBERON:0004211;6.34e-08;10!UBERON:0009773;6.34e-08;10!UBERON:0001231;6.34e-08;10!UBERON:0004810;6.34e-08;10!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,7.05e-34,2;UBERON:0003838,7.05e-34,2;UBERON:0003586,7.05e-34,2;UBERON:0005169,7.05e-34,2;UBERON:0002321,7.05e-34,2;UBERON:0005215,7.05e-34,2;UBERON:0002303,7.05e-34,2;UBERON:0002319,7.05e-34,2;UBERON:0003891,1.03e-17,4;UBERON:0002113,2.91e-11,26;UBERON:0003918,2.91e-11,26;UBERON:0011143,2.91e-11,26;UBERON:0005095,2.91e-11,26;UBERON:0007687,2.91e-11,26;UBERON:0010532,9.89e-11,7;UBERON:0000074,9.89e-11,7;UBERON:0001229,9.89e-11,7;UBERON:0001230,9.89e-11,7;UBERON:0003220,9.89e-11,7;UBERON:0005749,9.89e-11,7;UBERON:0004199,9.89e-11,7;UBERON:0004209,9.89e-11,7;UBERON:0004198,9.89e-11,7;UBERON:0000489,1.25e-09,31;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0004810,6.56e-08,10;UBERON:0004876,2.63e-07,11;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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|short_description=p@chr1:858638..858648,+ | |||
}} | }} |
Latest revision as of 10:49, 28 July 2015
Short description: | p@chr1:858638..858648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:858638..858648, + |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 7.05e-34 | 2 |
kidney interstitial cell | 7.05e-34 | 2 |
juxtaglomerular complex cell | 7.05e-34 | 2 |
renal interstitial pericyte | 7.05e-34 | 2 |
extraglomerular mesangial cell | 7.05e-34 | 2 |
pericyte cell | 1.03e-17 | 4 |
glomerular cell | 9.89e-11 | 7 |
kidney corpuscule cell | 9.89e-11 | 7 |
kidney tubule cell | 6.56e-08 | 10 |
nephron tubule epithelial cell | 6.56e-08 | 10 |
kidney cortical cell | 8.38e-07 | 12 |
renal cortical epithelial cell | 8.38e-07 | 12 |