FFCP PHASE1:Hg19::chr1:207104842..207104869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207104842..207104869,+ | |||
|coexpression_cluster_id=C435 | |coexpression_cluster_id=C435 | ||
|description=CAGE_peak_at_chr1:207104842..207104869,+ | |description=CAGE_peak_at_chr1:207104842..207104869,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!6.24e-08!1 | |ontology_enrichment_celltype=CL:0000313!6.24e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.18e-19;1!UBERON:0006298;1.56e-19;1!UBERON:0006242;3.91e-19;1!UBERON:0006965;2.99e-10;2!UBERON:0006595;4.54e-07;86 | |ontology_enrichment_development_v019=UBERON:0008801;1.18e-19;1!UBERON:0006298;1.56e-19;1!UBERON:0006242;3.91e-19;1!UBERON:0006965;2.99e-10;2!UBERON:0006595;4.54e-07;86 | ||
|ontology_enrichment_disease=DOID:630!4.11e-08!1;DOID:0050177!4.11e-08!1;DOID:0050427!4.11e-08!1;DOID:2152!6.24e-08!1 | |ontology_enrichment_disease=DOID:630!4.11e-08!1;DOID:0050177!4.11e-08!1;DOID:0050427!4.11e-08!1;DOID:2152!6.24e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.33e-15!2;UBERON:0003127!8.41e-15!2;UBERON:0001044!1.51e-11!6;UBERON:0003293!1.51e-11!6;UBERON:0003294!1.51e-11!6;UBERON:0010047!1.51e-11!6;UBERON:0000167!1.51e-11!6;UBERON:0007023!8.58e-11!115;UBERON:0001831!1.13e-08!1;UBERON:0001567!1.13e-08!1;UBERON:0008801!1.13e-08!1;UBERON:0001736!1.22e-08!1;UBERON:0006298!1.22e-08!1;UBERON:0000160!1.23e-08!27;UBERON:0001154!2.50e-08!1;UBERON:0001153!2.50e-08!1;UBERON:0002372!3.57e-08!1;UBERON:0001961!3.57e-08!1;UBERON:0001744!3.57e-08!1;UBERON:0001735!3.57e-08!1;UBERON:0004911!6.24e-08!1;UBERON:0004921!6.68e-08!129;UBERON:0004185!6.68e-08!129;UBERON:0001155!1.04e-07!9;UBERON:0001007!3.20e-07!155;UBERON:0001555!3.20e-07!155;UBERON:0007026!3.20e-07!155;UBERON:0003408!4.20e-07!10 | |ontology_enrichment_uberon=UBERON:0001829!1.33e-15!2;UBERON:0003127!8.41e-15!2;UBERON:0001044!1.51e-11!6;UBERON:0003293!1.51e-11!6;UBERON:0003294!1.51e-11!6;UBERON:0010047!1.51e-11!6;UBERON:0000167!1.51e-11!6;UBERON:0007023!8.58e-11!115;UBERON:0001831!1.13e-08!1;UBERON:0001567!1.13e-08!1;UBERON:0008801!1.13e-08!1;UBERON:0001736!1.22e-08!1;UBERON:0006298!1.22e-08!1;UBERON:0000160!1.23e-08!27;UBERON:0001154!2.50e-08!1;UBERON:0001153!2.50e-08!1;UBERON:0002372!3.57e-08!1;UBERON:0001961!3.57e-08!1;UBERON:0001744!3.57e-08!1;UBERON:0001735!3.57e-08!1;UBERON:0004911!6.24e-08!1;UBERON:0004921!6.68e-08!129;UBERON:0004185!6.68e-08!129;UBERON:0001155!1.04e-07!9;UBERON:0001007!3.20e-07!155;UBERON:0001555!3.20e-07!155;UBERON:0007026!3.20e-07!155;UBERON:0003408!4.20e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.49e-37;2!UBERON:0001044;5.39e-28;6!UBERON:0003293;5.39e-28;6!UBERON:0003294;5.39e-28;6!UBERON:0010047;5.39e-28;6!UBERON:0003408;5.39e-28;6!UBERON:0000167;5.39e-28;6!UBERON:0004921;6.57e-22;33!UBERON:0001831;1.18e-19;1!UBERON:0001567;1.18e-19;1!UBERON:0001736;1.56e-19;1!UBERON:0000160;1.91e-16;17!UBERON:0002108;1.88e-15;4!UBERON:0005409;5.92e-13;22!UBERON:0001041;2.09e-12;14!UBERON:0001555;3.98e-11;54!UBERON:0004089;1.64e-10;2!UBERON:0000161;2.66e-09;19!UBERON:0000166;2.66e-09;19!UBERON:0001155;5.00e-09;9!UBERON:0000059;1.51e-07;11!UBERON:0002114;2.47e-07;2!UBERON:0002110;2.97e-07;3!UBERON:0001007;7.81e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0001829;2.49e-37;2!UBERON:0001044;5.39e-28;6!UBERON:0003293;5.39e-28;6!UBERON:0003294;5.39e-28;6!UBERON:0010047;5.39e-28;6!UBERON:0003408;5.39e-28;6!UBERON:0000167;5.39e-28;6!UBERON:0004921;6.57e-22;33!UBERON:0001831;1.18e-19;1!UBERON:0001567;1.18e-19;1!UBERON:0001736;1.56e-19;1!UBERON:0000160;1.91e-16;17!UBERON:0002108;1.88e-15;4!UBERON:0005409;5.92e-13;22!UBERON:0001041;2.09e-12;14!UBERON:0001555;3.98e-11;54!UBERON:0004089;1.64e-10;2!UBERON:0000161;2.66e-09;19!UBERON:0000166;2.66e-09;19!UBERON:0001155;5.00e-09;9!UBERON:0000059;1.51e-07;11!UBERON:0002114;2.47e-07;2!UBERON:0002110;2.97e-07;3!UBERON:0001007;7.81e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.73e-37,2;UBERON:0001044,5.40e-28,6;UBERON:0003293,5.40e-28,6;UBERON:0003294,5.40e-28,6;UBERON:0010047,5.40e-28,6;UBERON:0000167,5.40e-28,6;UBERON:0001831,1.30e-19,1;UBERON:0001567,1.30e-19,1;UBERON:0008801,1.30e-19,1;UBERON:0001736,1.56e-19,1;UBERON:0006298,1.56e-19,1;UBERON:0003408,4.23e-17,10;UBERON:0000160,1.84e-16,17;UBERON:0002108,1.88e-15,4;UBERON:0005409,1.64e-11,25;UBERON:0004089,1.72e-10,2;UBERON:0007023,1.06e-09,114;UBERON:0001155,4.80e-09,9;UBERON:0000166,4.13e-08,22;UBERON:0000059,1.46e-07,11;UBERON:0001007,1.86e-07,145;UBERON:0001555,1.86e-07,145;UBERON:0007026,1.86e-07,145;UBERON:0002114,2.47e-07,2;UBERON:0002110,3.35e-07,3;UBERON:0006242,3.35e-07,3;UBERON:0004921,3.76e-07,118 | |||
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|short_description=p@chr1:207104842..207104869,+ | |short_description=p@chr1:207104842..207104869,+ | ||
}} | }} |
Latest revision as of 03:02, 28 July 2015
Short description: | p@chr1:207104842..207104869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207104842..207104869, + |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.73e-37 | 2 |
saliva-secreting gland | 5.40e-28 | 6 |
gland of oral region | 5.40e-28 | 6 |
gland of foregut | 5.40e-28 | 6 |
oral gland | 5.40e-28 | 6 |
oral cavity | 5.40e-28 | 6 |
parotid gland | 1.30e-19 | 1 |
cheek | 1.30e-19 | 1 |
parotid gland primordium | 1.30e-19 | 1 |
submandibular gland | 1.56e-19 | 1 |
submandibular gland primordium | 1.56e-19 | 1 |
gland of gut | 4.23e-17 | 10 |
intestine | 1.84e-16 | 17 |
small intestine | 1.88e-15 | 4 |
gastrointestinal system | 1.64e-11 | 25 |
midface | 1.72e-10 | 2 |
adult organism | 1.06e-09 | 114 |
colon | 4.80e-09 | 9 |
oral opening | 4.13e-08 | 22 |
large intestine | 1.46e-07 | 11 |
digestive system | 1.86e-07 | 145 |
digestive tract | 1.86e-07 | 145 |
primitive gut | 1.86e-07 | 145 |
duodenum | 2.47e-07 | 2 |
gallbladder | 3.35e-07 | 3 |
gall bladder primordium | 3.35e-07 | 3 |
subdivision of digestive tract | 3.76e-07 | 118 |